Id Trinity | FTRINITY_DN52139_c0_g1_i1 |
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Name Transcript | Ll_transcript_173332 |
Sequence | CAAACACACCGCAACAACATAGAGAGGAAAAAAATGAAAAGAAGAATGAGCGGTGATAGCAGCATAGACATGGATAAGGAGAGATTAACGGCTGATATGG ATTTCAAAGATTCTTCCTCCGCCGTCATCAAAATCCGGCGACGGTTGCCGGATTTTCTCCACTCCGTTAAACTCAAATACGTTAAGTTAGGTTATGGCTA TTCATGCAACGCCACCACAATCCTCTTCTTCACACTCATTCTCCCTCTCTTCCTCACCCTTCTCTTTCAACTCACACGTTTAAACCTCAACCTTCACCAC CTCACTAACTTCTTCTCCGGTTCCAACCGGACAATTCAACTCGATTCTTATACACTAACCCGGTTCGCTGCTTCATCTTTTCTTCTCTTCCTTCTCGGCC TCTACTATGCTAAACGCTCCATACCTGTTTACTTGGTTGACTTCTCTTGCTATAAACCGGAACAAGACCGGAAAATCTCGGTTCAGAATTTCCTAAACAT GACCGAAGAAACCGGCGCCTTTGAAAAAGAAACTGTTCTTTTTCAAAGGCGGGTTTCTTCTAAAGCTGGTTTGGGGGACGAGACGTATCTTCCGAGAGGA ATCACGTCTCGTCCACCAAACCTTAACATGCAGGAAGCGAGGCTTGAAGCCGAAGCTGTAATGTTTGGTGCGTTGGACTCGTTGTTTGCGAAAACAGGAG TCCAACCACGTGATATTGATATATTGGTAGTGAATTGCAGCTTGTTCAACCCTACTCCATCGCTTTCTGCTATGATTGTGAATCATTACAAAATGAGGAC TAACATCAAAAGCTATAATCTTGGTGGAATGGGATGTAGTGCGGGTTTGATTTCAATCGATCTGGCGAAAGATCTATTGAAAGCAAACCCGAACTCTTAC GCCATTGTTGTAAGCACAGAGAACATCACTCTCAATTGGTACTTTGGAAATGATCGATCTATGCTTCTAAGTAACTGTATTTTCCGTATGGGTGGTGCAG CGGTTCTTTTATCGAACAAGGGTTCGGACCGGGTTCGATCTAAATATGAATTGGTTCACACGGTTCGAACCCATAAGGGTTCAGATGATAAGAATTATAA TTGTGTGTATCAAAAGGAAGATGAGAATGGAAAAATTGGGGTGTGTTTGGCTAGAGAGTTAATGTCTGTTGCTGGAGATGCTTTGAAAACAAACATAACA ACGTTAGGACCATTAGTGTTACCGTTTTCTGAGCAATTAATGTTTTTTGTGTCCCTAATGAGAAGGAAGTTTATGAAAGGGGCAAGGGTAAAACCGTACA TTCCTGATTTCAAGCTTGCATTTGAGCATTTTTGTATCCATGCTGGTGGAAGAGCAGTGTTGGATGAGTTACAGAAGAATTTGGAACTTAGTGAGTGGCA CATGGAACCATCTCGGATGACGTTGCACCGATTCGGGAACACTTCGAGTAGTTCACTTTGGTATGAGTTGGCTTATACTGAGGCTAAGGATCGGGTTAAA AAAGGCGATCGAGTTTGGCAAATCGCTTTTGGGTCCGGTTTTAAGTGTAATTCGGCGGTTTGGAAGGCGGTGAAGGCGATGCCCACCTTGAAGGACTGGC GGGGCAACCCATGGGATGACTCGGTCGATAAATATCCTGTTCATGTCCCTACTTCTATTAGCAATGCTAGTTAAGCTTTGTTTCTCTTATGAGGATGTGG GGGTGTTTATTAATTGTTATTACTATTAATTCTTATTCTTAATTATTATAGCATTATTAATTAATGTACGTGATGACTATTTGTGTTTAAAGTATAAGGT AGTAGGTACCCATTCAAATTATTCAATAGATGTTTATTTAGATTAAATGACAAGTAATAATACACTATACAAGCTCCCTTCACTGCATCATTACAAATTC GATTCATCTGTCACTATTTAATATTCACTTTCTTCTGTAGAAGTCAAATATAAGAGCAATCATAATAGTTGTTCTTAAGTTTAAGTTTGTACTTAATAAA ATGAGAATATTTTC BLAST |
Tissue | flowers |
Gene name | LI_gene_23974; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_173332
Blastp | 3-ketoacyl-CoA synthase 1 from Arabidopsis with 75.19% of identity |
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Blastx | 3-ketoacyl-CoA synthase 1 from Arabidopsis with 75.09% of identity |
Eggnog | 3-ketoacyl-coa synthase(ENOG410Y5VH) |
Kegg | Link to kegg annotations (AT1G01120) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432882.1) |
Pfam | FAE1/Type III polyketide synthase-like protein (PF08392.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |