Ll_transcript_173313

• Id Trinity: FTRINITY_DN52161_c0_g2_i1
• Name Transcript: Ll_transcript_173313
• Sequence: GAATTTCATTTTTTTTTGAGGTAACTAAATAGATAATTCAGATTAACTTGTTATATATAATATATCTTTCTCTCTCTCTGAACCATTATCAAAACCCCAT TAGAACTTTAGAAACCAAACCTATAGCAGCTTCTTCAATTCATCAATGGAACATTGTTTAGCTTCAACATGTATTATGCCATTGAGTTTCAATTTCAACA ATTCTAAAAGAACAATCCTTTTTCCAACAACAACCTTAACCAAATCAAAACCTTTGTTGTCTCTTGTCAATGCTTCCAACACCAAAAGAAACACCTTGTC TTCTAATTGGCTTGTCTCAAATGATGATTTCTCTTCTCTATCAACTGCTTCTCCTTGGCTTCCTACACTTCAACAACTTGATACCACTAACATGCTCCTT CGTCAAAGGATTATCTTTTTGGGTTCTCAGGTAGACGATGTAACTGCGGATTATATCATCAGTCAGCTTTTGTTTTTGGATGCTGAAGACCCCAAGAAAG ATATCACATTGTTTATTAACTCACCTGGTGGTTCTGTTACTGCTGGTATGCCGATAAAGTTTTACTGATTCAGTGTTCTTTTCATCTTTTCTGCTTCTCA AGGACCTGGATATGCGCTTGACTTATGAGCCCATTTTGTGTATTTGGTTACTCTCAGATATTAAGTTTCTGTAGTGTCGGGTTCATTTTTTCTGACTTCA GTAGCTTACATGATTGATGTGCTACTTGTGGTAAAAGTTGCGTAGCTTATAGAGTATTGATTGAGACTCATGTTTGTCTATGTTATACCCTCTCATTTGT GTTTACCAATAAGAAAACAAAAACGAATTATGGGCAACTCTGATAGGAAAGGTTTTTAGATATTAGAAAACTCGTAAGCTCATTAGCATTTAATATGTAG GTAAAGGAAATGAGTGACACTTTTGTGAAGTATGAGGCATAGTCTAGCTTAACGAATCTGAAATACAACTCTCTTTTAATGATTCAGTGGTTTTGCTTGT TTGCTTATCTTTTCTTCTTAACCGCAAAGTGGATATGTACTTGACTGTTGAGCTCATTTTTTAATTTGGTTGCTCACGGTCGCTGATCTTAACTTTCTTT AATGTTAGACTATTTTTCCTGACTTAAGTAGCTCACATGACGTGCTGCTTGTGGTAAAATGCACTTATGTCCTCACTGTATTTACCGATAAGAAAAAGAA GGAATTGTTATTTGCTCTGATAGGAAAGCTAAGTCAGATATGTGAACCTTATCAAGTACATTAGTATTTAATCTATAGTTATAGGAAACGAATGAAGTTT TTGTGATGTTTGAGCACAGTTGAGTTGAATGAATCTGAAACACGTCTACGTTTGGCTACTTAGATTGCTCGTATTTTGTTTATCGTTCCGTGTAGGAATG GGAATTTATGATGCCATGAAGTTATGCAAAGCAGATGTGTCAACTGTTTGCCTTGGTCTTGCTGCATCGATGGGTGCATTCATCCTAGCTTCTGGTACCA AAGGGAAGAGGTATTGTATGCCGAATTCAAGAGTTATGATTCATCAGCCACTCGGAACTGCTGGTGGAAAAGCTACGGAAATGAGCATTCGTATTCGAGA AATGGCGTATCACAAGATTAAGATAAACAAGATACTATCAAGAGTTACAGGGAAGCCTGAAGAACAGGTT
• Tissue: flowers
• Gene name: LI_gene_24038;
• Additional information: details;

Expression of Ll_transcript_173313

FPKM

• FPAB: 5.1
• FPNAB: 3.4
• LF1: 5.1
• LF2: 7.2
• LF3: 5
• LF4: 4.2
• UF1: 5.8
• UF2: 6
• UF3: 5.6
• UF4: 5.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_173313

• Blastp: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic from Arabidopsis with 55.73% of identity
• Blastx: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic from Arabidopsis with 85.42% of identity
• Eggnog: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)(COG0740)
• Kegg: Link to kegg annotations (AT1G66670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453049.1)
• Pfam: Clp protease (PF00574.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;