Id Trinity | FTRINITY_DN52163_c0_g1_i15 |
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Name Transcript | Ll_transcript_174164 |
Sequence | TTTCAGTTCCTAATACATCTCATTGAGTTGAATGCTTCATGTTTGTGCATTTTTTATGTTTTCTACTTCTTTCCTTATTTTTTTTAACATTGTTTTACTC TATAAGTTATCTATCATTTTAGAATATTAAAAAAAAATACTAATTAACTTGGGATTTAATTAGAATGCTATGATAGTGTAAACTTTAGATTTTTACAATG ATAACAACTGATGCATTTTCACACCATTAAAAACTCTTAAATTTATCTTGACTATCTTAAAAGTCATGCATAGTGCAATGCGTATAACAAACTTTACATT GACTTTGACTGTGTATCAAAATTAAGTTCATTAATTTATTTCAACTTTACCCTGATCATGAAAGTCTCATCTCAAGCTAAACTTTTAGCAAACAAAATTA TGTTTAGTAGGTGTGCGTTTTTAATTGCTCTTTCTCCAGTTTGGCAGCTCTTGTCTTTGTATATGATATCAATCAAACTTCATAGTCTGTCACATTATAT AGTCTCCTTTAGCCAAAGAGTACTTTTTTGCTAGGTATTATCCTCGTCATTGGGGTTTTATTTGGTATGTACTGATACATTAGCTCTATGACATGAAGAC TTAGAGAGTGAAGAGCCCTGCGATGCAAGTGACGATGAGAAAAGAAGCGCTGTGACGGCTATGGATAACATATTTTCTATACTTACCCACTACAGTGAGT CAACGGGCAAATTGGTGTGTAGAAAGAGATGCAGCATGCCTGATGTGGGTCTTCTTAGTACATCCTTGATTATTTCCCTTGGTAGAATCAATCAAAGCTT TGTATTAACTAATCCACATTTACTTGACATGCCTATTGTGTACGCCAGTGATGCTTTCTTGAAATTGACAGGTTATGCAAGAGATGAGGTGTTGGGCTGC AACTGTAGATTTTTGAGTGGAAAAAATACTGATACCTCAACTTTATATCTGATCAGGGAAAGCATTAAAACTGAACAACCGTGCACAGTACGTATTCTGA ATTACAGGAAGGATAAAAGCTCATTTTGGAATCTTCTCCACATCTCACCAGTTCGTGATGCTTCTGGCAAGGTAGCTTACTTTGTTGGAGTTCAAATAGA AGATGATCATAAAAACGGGGACAGACCGGGTTTGAGCCCTGAGAGAAGGCAGCTTAGTGTGGTTGGAGTAGTAAAGGTTGCTGTGAGGAGTTTATCTATG ACTGCTGGGTCCTCTAAGCCTTAGTCACAGGATAAGTCACGGTGGATTCTTTGTCATTGGTATATGGTTTTCCAAATAATGTGCCTTCTTTCCAAAAAAA A BLAST |
Tissue | flowers |
Gene name | LI_gene_24043; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_174164
Blastp | Protein TWIN LOV 1 from Arabidopsis with 67.26% of identity |
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Blastx | Protein TWIN LOV 1 from Arabidopsis with 64.4% of identity |
Eggnog | Histidine kinase(COG2202) |
Kegg | Link to kegg annotations (AT2G02710) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434578.1) |
Pfam | PAS domain (PF13426.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |