| Id Trinity | FTRINITY_DN52163_c0_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_174168 |
| Sequence | TAAAAATCTAAAACTTCGTGTGACTGTGCTTTGATGCTGGATTGTGTCCTCTTCTTCCCTCACCTTCTTCCTACCTTTGCTAGTCACAAATTCATTGTTT TGTTTTTTGACTTTTCCTTCTTCATCTTTCATAATTTCTTTCCTTTCATTTTCCATCCAATTATATCATTTCTCTGGTCCCTCCATCAAATAGTACTAGT TATTAACTATCCAATCCATCACCACAATTTCATCCCAGATATTTTCCCTTTCCCAAACAGACACAAATAGTAACAATACCTCATCCTTTTCCTTTTTCTT TTCTCATCTCAAATCTTCACTTTTTTTCCTTCCACATAACACTTCTTCAATTATTATACTCCTTAATTCTCTACTACTTGCTTCTTTGTGCTAATTCTGT GTTTTTCTAAAGCTGGTATTTTTACTTTAAAAAGAAAAGAAAGCATCAAATACCACATGGGATTGGGAATAACCCCAACAACGAGAAATTTCATTCAGGC TTCAACTTCTGCTCAACTAGTATATAACAACAACAGCATCAACTACAACAAAGAAGATGGAATTGGGATCGTGTGTGAAAGAGAATTCCTTCAACGATCA TTACTCTGTTTACGCAGGCGAGGCGCTCGACGAATTGCCTGATAGCTTTACCATCACTGACCCTTCAATCCCAGGCCACCCCATCATATTTGCTAGCCTG GGATTCCTGAATATGACAGGGTATACTAGGGAGGAGGTTGTTGGAAACAGCGGCGCCATGTTTCAGGGTTCAGGGACTTGTAGAAGAGCGGTTATGGAGA TTCGAGAGGCGATAAGGGAAGAGAGGAAGACTCAGGTTGTTCTGTTGAATTATAGGAAGGATGGGACACCCTTTTGGATGTTGTTTCATATGAGCCCTGT TTTTACGGAACACTATGGCGGGGTGGTTCATTTTGTGGCAGTTCAGGTTCCCTTGCAGAAGAAAATGAATTTTTACGAAGATGGGTCGAGGCTGCAGCAG GATTTTGTGTTTGGGTATTGTAGGAAGGAAGTTTGCTTGGACTCTGTGTTGGGACTTGGTCGTGTTTGTCCTATGGATCAACATGATGATGTTAGAGGTA TTATCCTCGTCATTGGGGTTTTATTTGGTATGTACTGATACATTAGCTCTATGACATGAAGACTTAGAGAGTGAAGAGCCCTGCGATGCAAGTGACGATG AGAAAAGAAGCGCTGTGACGGCTATGGATAACATATTTTCTATACTTACCCACTACAGTGAGTCAACGGGCAAATTGGTGTGTAGAAAGAGATGCAGCAT GCCTGATGTGGGTCTTCTTAGTACATCCTTGATTATTTCCCTTGGTAGAATCAATCAAAGCTTTGTATTAACTAATCCACATTTACTTGACATGCCTATT GTGTACGCCAGTGATGCTTTCTTGAAATTGACAGGTTGTATAACCTTTACCTCTTGTAAATTAAGAACATAGCCTCATGATCATTAATTTAAATATTCTG ACAACTGATGTAATGATATAAAACCAATTACTTTGATTAATATTTTCAATTTATGTTAATGTTTTCACTTAACTTGAATAGGTTATGCAAGAGATGAGGT GTTGGGCTGCAACTGTAGATTTTTGAGTGGAAAAAATACTGATACCTCAACTTTATATCTGATCAGGGAAAGCATTAAAACTGAACAACCGTGCACAGTA CGTATTCTGAATTACAGGAAGGATAAAAGCTCATTTTGGAATCTTCTCCACATCTCACCAGTTCGTGATGCTTCTGGCAAGGTAAACCTTGCACATGAGC TTTATCAGCTGGAATATAAATCTTAAATATGCCTGTTTTCCATTTTCTGCCAGTTATTTGTTTTTTCTCATTCTAATCAAACATAAAGAATATTAAAATA GCAAAACTTGAAATGGTCTTGATTGCATTTTCATGGTAATTACATGACTGCTGTCTGCTACTATTTTGGCCTGCTAGCTGCTTTGGACAATAGAATAGGC ATGAACTGCTAGAACAATAGAATTTCTTATAGACGAAACCCTCTTCCTAGATTTATGTCAATGGTGATAATGGAATCAAGATGAGCTAGCTGAATGTACA AGATGTGAATCTCTCTCAATGTCAGGATACTCGAGAATTTTGGCTTTCCCTTTCCAGTTTCTGTTACAATTGTCAACAGCAGCAACATTGGGTCCTATCT ATCCCCTACACTCCACTCTATTTCGCCTAACATACACCTCTTCTTAATTGAATCTGTACTGATGCCTGTATATCCCCTATTTTCCTCGTCTCTCTGTTAG GGATGCCAATTCAGGGTGTTGGCTCCTCTCTCTCTTCCCACCCTGTCTATTCTCTTCTGAAGAGAAACTAAACCAGGTTTTGAAGTTTGAGTTACCAATT GGTTTGATCAGTTTTCATATTGTTGCAGTTCATATTTATTGAGGCTATTTGCAGATTTAAAATGGTCACAGATCCTTTAAGATTAGATGCATATTGGGAA GAGATGCCTTCAGTAGAATATATGGATTTTATTTCTGTATATGTTATGTGATAGTCCTCTACTCCACATTAATGTATCGCGAATTAAATGAGTTATTAGT TATTACCCAATGGTGCAAAATGAAGACCAACTTATTTTGGCTCTTTTTTTTATGGTAAAAATAGTGACAGAGAAACAATTCCACTTACTATATTCTTTGA ATTCACTGTTTATTCAGGTAGCTTACTTTGTTGGAGTTCAAATAGAAGATGATCATAAAAACGGGGACAGACCGGGTTTGAGCCCTGAGAGAAGGCAGCT TAGTGTGGTTGGAGTAGTAAAGGTTGCTGTGAGGAGTTTATCTATGACTGCTGGGTCCTCTAAGCCTTAGTCACAGGATAAGTCACGGTGGATTCTTTGT CATTGGTATATGGTTTTCCAAATAATGTGCCTTCTTTCCAAAAAAAAATGTTTCCCATTAGGAAAAATTGTCATTCTCAACTGGTGACTGTTGAGATGAT ATAGAAAGGTGAAAATTTGATTTGTGAAATGCATATTGCCAATTAAAGAAAACATTCTGCATAGGAACTTGCGAATCTGTGAATCAAATGTGTTATTTTT CCACTGGAAACTCTTAATGTAGCAATAGAAGTTTGAACTTTTACCCAGTTATCTCATTTTTTAGTTCCACAGAGCAATTCAACTATACGGTGCTTTTTTT TATCTGTTTAACAATATTAATGTTAAACGGTAAACTTTGTCTTGGAAAGTACAAATTTCATGTTTTCTTTCTAAGCAAATGCTGAAACGAAATACTAATC TATCACAAAACTTTCTCATATCCCATATTATTGAAGTAAAAGCATGGAAACTTGAAGGGATTTTTTATCTATAAAGTCAATGTTTATTGGTGGTTTGTCT GCGAGTTGGATTTTGTAGGAAAATGGAAGGTAAGAGAAGGATTCAAGGTAATCTCACAAATATATTTCACGACTCTTAAACTTCTCTTCTCTTTCTTTTC CCTCCAAATTCAAAATGTTTTAGACCATGAAATATGTCTATCTGCTCAGTCTTAGGTTACCTGCATGCTGCAGTGCCCGTGACCTAATGTTAATGCTTGT TATACTACGCTAGAGGCCCTTCTCATTCATTCTAAATAAATGAAATAGCTGAATTAAAATCTGTGTAACATGCCCTTGGATTAGATCATTCCATAGAATT CATCATCATATATGTTGGATGAATTATTGATTGGTATAACATTTTTATGTATACCTTGTGTATTGATTATCTGATATACACATGTACTTACTCGCCTAAC ATTTTAGTGAATATGTGCCTTAAAAGACAAGATGATACACTCATTTGGAGGAATGGAAAGACAATTGTAATAGTTGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24043; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_174168
| Blastp | Protein TWIN LOV 1 from Arabidopsis with 55.31% of identity |
|---|---|
| Blastx | Protein TWIN LOV 1 from Arabidopsis with 55.31% of identity |
| Eggnog | Histidine kinase(COG2202) |
| Kegg | Link to kegg annotations (AT2G02710) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (NP_001278942.1) |
| Pfam | PAS domain (PF13426.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |