Id Trinity | FTRINITY_DN52170_c0_g3_i10 |
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Name Transcript | Ll_transcript_173436 |
Sequence | CGAAAAAACCCTCTTCTTCTCATGAAACTCACGCACAAATCACATATCCAAAACCTCGTCGTTTCAGTGATATGATGAAGCTTTAGCGTGAGAGCAAAGA AATCTCAGAATCGTTTCATTTTCATTTCATTCAATTCTCAATGACTACTCTTTCTTCTTTTCCAAACTCTAATCCCAATCCAAACCCTAATTTCCACCCT GACCAATCCCAAACCATAGACTTCGATTCCGCCATGCCACCGCAGCCCCAATCCCCGCCGCCACACCCTTCGCCGGAATCTCCATCTCCGCCGCCGCAGC TACTCCAACTTTCCTTCAACCAAGACCATGCCTGCTTCGCCGCCTCCATGGACAACGGTTTCCGCATCTTCAATTGCGATCCATTCCGGGAGCTTTTCCG GCGGGAATTCGACGGCGGAGGTATTGGCCACGTGGAGGTGCTATTCCGGTGCAATATACTCGCCCTCGTCGGCGGTGGTTCTCACCCTCAGTACCCTCAA ACCAAGGTCATGATCTGGGACGACCACCAGGGAAGGTGCATCGGCGAACTCTCGTTCCGCACGGTGGTTCACGGCGTTCGGCTTCGTCGGGACCGGATAA TTGTGATCGTGGAACAGAAGATATTCGTGTACAATTTCGCTGACCTCAAATTGTTGCAGCAGATTGAAACCGTTGCAAACCCTAAGGGGCTTTGCGAGGT TTCGCAGGGTTCGGATTCACTCATTGTCGCGTGCCCCGGGTTGCATAAGGGGCAGATTAGGGTTGAGCATTACGCGGCGAAGAAGACTAGGTTCATTTCG GCGCATGATTCAAGAATTGCTTGCTTTGCTCTCACGCTTGATGGGCAGTTAATTGCTACTGCCAGCACCAAGGGTACATTGGTTCGGATATTCAATACGG ATACTGGGACACTACTTCAGGAAGTATGTGAGTTTGGTGTTTTGTTTACGAGAACAACAACAACCCAGCCTTAATCCTGTTAAGTAGGTTGACTGTTTGG TTTATGAGAAGTGTTGTAAATTTTAGGTTGAGTAAAACATCAATGTAGTCTCAGAGGTTGAGATCTATCGATTTGGTCATCGAGATTAAAAAAACATCAA TTTGGTCCTCAACTTTGACGACTGTTTGCTAAGTGAAGGAACAAAATGATGTTTTTTGTAATCCCAGAGATATCTCAAGGACCAAATTGACACATTAACC TTTTTAGGCTTTAGCATGAATTGTAATTTGCCGTGGTTCAATACTTAGGACTTGAAAGCTTTAAAATTGAAGCTGAAAACTGGGTTAGGTTGAACATGTA GCATGTCGATATTAGGAATTTAGGATAGTGAAGATATCAAGCTAATTGAAAAGTAGAGTTATCAATTAGGTCATTAGGTGAGTTCCTGATGTTGACCAGT CTGACGTTTTATGGTGCAGATTTGAACTGGTACAGATTCATTGCTTTCAATTTAATGGTTTCCCATAGCTTATAGCTGTTAAGAGTCCCGAGTCAGTTGA GAATGAGAATAAAGAACCCTTCACAATAACTTGGGTTGGTCCTCATGTATAAATTGTTTTGATTTAAATTTAGGTAAGAAGGGGTGCAAATGTAGCAGAG ATCTTTAGTTTGGCATTCTCTTCTACTGCTCAGTGGTTAGCAGTCTCAAGCGACAAGGGTACTGTCCATGTTTTCGGCCTTAAGGTTAATTCCAGTGTTC CTGAGAATGAAAAGCCGCAGAGTTCATCCAATTCAGATGCTGCCACTAACCCATCTAACTCACCTCTCTCGTTCATTAAATTCAAAGGAGTGTTGCCTAA GTATTTCAATTCAGAGTGGTCAGTTGCTCAGTTTCGCTTACAAGAGGGTTCTCATTACTCAGTTGCATTTGGTCTACAAAAGAACACAGTTATAATCCTT GGCATGGATGGAAGCTTTTATAAATGTCAATTCGATCCAGAGCATCGCGGGGAGATGACTCAGCTGGAATATCACAACTTTTTAAAGCCAGAATCTGCCA TTTGAGAGGATAAGAGATGAAATCATGTAAAAGGTTGGCATTTCAGCTTTTAGTTAGGGTTCTAGGTAATAATATGCAATGTAATATAGTAATAGATGGA GACTGAAGTAACACAAACCTTGTTCCTGCTTTACCCAGGCTCAACCTTATTGGTTCCATTGTAATATTGTAAATTTGTAACTGTAATTATATGGTATAGT TTTTTTTTTAAAATAACAAATAGTGAGTGCTATGATAAAGCTGTCATTTTGTATTGATTTGTGCAAGGGTGTTGTCGAATTTGATCTTCTTATTACAAAT ATTTTCATAGTATAACAAATATAAATGATACTTGGG BLAST |
Tissue | flowers |
Gene name | LI_gene_24073; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_173436
Blastp | Autophagy-related protein 18a from Arabidopsis with 63.76% of identity |
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Blastx | Autophagy-related protein 18a from Arabidopsis with 76.59% of identity |
Eggnog | WD repeat domain phosphoinositide-interacting protein(ENOG410XQZ6) |
Kegg | Link to kegg annotations (AT3G62770) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421581.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |