| Id Trinity | FTRINITY_DN52170_c0_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_173422 |
| Sequence | CCAATCCCAACCCTAATTTCCACCCCGACCAATCCCAAACCCTAGACTTCGATTCCCTCATGCTTCCGCAACCTCAATCCCCGCCGCCGGAATCTTCTTC GCCTCCACCGCCGCCACAGCTTCTCCAAGTTTCCTTCAACCAAGACCACGCGTGTTTCGCTGCTGCCACCGATAACGGCTTCCGAATCTTCAATTGTGAC CCGTTCCGCGAGCTCTTCCGGCGGGAGTTTGACGGCGGCGGAATCGGTCACGTGGAGATGCTGTTCCGGTGTAATATACTCGCTCTTGTTGGCGGTGGGT CTCAGCCTCAGTATCCTCAAACCAAGGTTATGATCTGGGACGATCACCAGGGACGGTGCATTGGGGAGCTTTCGTTCCGGACAGTGGTTCATGGCGTTCG GCTTCGGCGGGACCGGATTATAGTAATTGTGGAGCAGAAGATATTTGTGTACAATTTTGCTGACCTCAAATTGTTGCACCAGATTGAGACCGTGGCGAAC CCTAAGGGGCTTTGCGCGGTTTCGCAGGGTTCGGATTCGCTTGTTCTCGTGTGCCCCGGTTTGCATAAGGGGCAGATTAGGGTTGAGCATTATGCGTTGA AGAAGACTAAGTTCATTTCGGCACATGATTCAAGCATTGCTTGTTTCGCTCTCACACTTGATGGGCAGTTAGTTGCTACTGCCAGCACCAAGGGGACGCT GATTCGGATATTCAATGCAGATAATGGCACACTACTTCAGGAAGTAAGAAGAGGTGCAAATGCAGCAGAGATCTTTAGTTTGGCATTCTCTTCTACTGCT CAGTGGTTAGCAGTCTCAAGCGACAAGGGTACTGTCCATGTTTTCGGCCTTAAGGTTAATTCCAGTGTTCCTGAGAATGAAAAGCCGCAGAGTTCATCCA ATTCAGATGCTGCCACTAACCCATCTAACTCACCTCTCTCGTTCATTAAATTCAAAGGAGTGTTGCCTAAGTATTTCAATTCAGAGTGGTCAGTTGCTCA GTTTCGCTTACAAGAGGGTTCTCATTACTCAGTTGCATTTGGTCTACAAAAGAACACAGTTATAATCCTTGGCATGGATGGAAGGTATGATTTGAGAAAA AAAACAAAATTGCAATTTTCTCTTAAGATGCTCATTATTGTTTGTCGCTGGTTGCTATTCTGTCTATGTAAGATGCTGTCAGTTCTATCGTCATATGTAA AAGTGGTTATAATAATGCTGTCAGTTCTGTCACTCAGAAGTATTTGAGTTAACCTATAGAAAAAAGTATGTCCCATACTTTATATGAAAGTAAATACTGT CTCAAAGTTAACTTTCACATATATTTTTGTTCATATGCATTGCATTCAGTCTCAGTACCTCTTCTAACAAACCCCTCCCGTTTCCCCCCATGCACTTGTA TTTTTTATGCTTTATATCTGAAACGGTAAGGTTGCTTACCTTGTGATCCGAAGGTCTTGAGTTCAAATCCCAGAAACACTCTATTTGCTTGCGAGGGTAA AACTGTATACATCTACTCTCCTCATACTCCATTAGATAGGAGCCGAGTGCACTAGGCCATTATTTGTATCTGAAACACTTGCTTTTTGATGCTTTTCTGC CCATAACATTATAGATGTTTATGCTATATTATTGTTAATGATTCACAATTGATTGACCCATGCAGCTTTTATCTATGTCAATTCGATCCAGAGCATGGTG GGGAGATGACTCAGCTGGAACATCACAACTTTTTAAAGTCACAAACAGCCATATCAGAGGACCAGAGATGAAAAATCCTGTTAAGGGTTGACACACATTT CGGATTCCAGTTAGGATTATACAGTAATATGCACTGTAATATAGTAATAGATGGTGACTGAAGTAACACTTACCCAATTACTAGTTACCCAGGGTCGACC TTTTTGCTTCCCTTGTAATATTGTAATTGCAGTTAGATAGTATAGTTTAAAAAAATAAAATAAGAAATATAGAGTGGTTTGATAAAACTGTCATCTTGTA TCAGTTTGTATTAGTATCCTATGAGCATGTCGCAATTTGTCTTCTTGGAAATATCTTCTACCACACGAAAATAAAACATAAAAAGTTGACCCAATATGTG AGAATCTCGTTAAGTGAGGTTTGGAAAGGATAAATGTATATAATATTATTGGCACATAAATTACAATTTATATTGTATTATGAAAATGTCAAATGAAAAT CCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24073; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_173422
| Blastp | Autophagy-related protein 18a from Arabidopsis with 72.35% of identity |
|---|---|
| Blastx | Autophagy-related protein 18a from Arabidopsis with 74.14% of identity |
| Eggnog | WD repeat domain phosphoinositide-interacting protein(ENOG410XQZ6) |
| Kegg | Link to kegg annotations (AT3G62770) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419463.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |