| Id Trinity | FTRINITY_DN52179_c1_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_174084 |
| Sequence | TGAAATAAAAGGTACCATGGATCAACGCTTCCTTTATCATATAACGCTAAACATTCATTTTATTTCATTAATTAATTCTAAAAATTGATTTTTAAAAAAA ACCCAATTCAGATTCATAGCGGTTCTTCTCCGCCACCAACACCACCGGCGAGGTTGCCACTATGTTAACTTATTTGCTGTAACTTGGGTTTTTTTGTGCG TCGTTTTTGTGTTTGTTTGTTCAGGTGAATTTTGAATAATGTGTTCAGTGCTGTGTTCAGAATTGGGGTTTTTATGTTTTTTTATTACAGAGCTGATTCG TGGTTTTTCAATTCCAGTTGATACATTAATTAAGCTAAATGGTCTTACTTTGAAGAGTTTTTGCTGTTTCAGGCTTTTCTTTGAAGTTGGAGTTATTCTA TTTAGGTGAATCTCTAAGGCACATTGAGAGTCACGAGTAGCATGTCAAGTAGGGGTGCTTCTCGAAAGACGTCCAAGGGCCGCCGATCATCAGCATCAGT TCAAGAAACTAGTGAAGTTCTTTTAATGAAAGGCCCATGGACAGTAGCAGAGGATGAAATTTTGACAGAATATGTCAGAAAACACGGAGAGGGAAACTGG AATGCAGTACAGAAGCATTCAGGACTTGTCCGTTGTGGGAAAAGCTGCCGTCTACGATGGGCAAATCATTTGAGACCTGATTTGAGAAAGGGTGCATTTA CTTTAGAGGAAGAGGATCGAATCATCGAGCTCCATGCTAGAATGGGGAACAAGTGGGCTCGAATGGCTGCCGAGTTGCCAGGACGTACAGACAATGAGAT AAAGAATTATTGGAACACAAGAAGTAAGAGAATGCAACGTGCTGGCTTACCACTCTATCCTAAGGAGATATACCTACGGGCGTTTAACAACAATCAAGAA AATCTAGACGTCGGCACCGTAAAAAATGAATCTGGCCAGGATGATGATGCCTCACAGACAGACAACTTTGATATACCAGATCTTGATTTCAAAAATTACA AAATTCACCAGGATCTATCTTATGCACCAGCAATTTTTGATATACCTGAAAGCAACATGTTCAAACAACCTTCAGACTCATCCCACAGTTATAATGCCAT GTCCCCAACAAATCCCAGAAAGCGCCTTCGAGAGCCAGATGTGTTATACAATAATAGTTTTGATGGTTACATCAGTAATACTGTCCCATTATTTGATCAG TATGGCAATTACCCTAGCGAGAAAGTTTCTGACCATCCTAGGTTTTCTTCTCCATGCAATCTCATTCTTGACACCGGTCAGTTCCATGGTTATGACTTTC CTGGCAGCCATGCCGCTCTAAATGGCAACACTTCTTCTTCTGCGCCCATAACCGGGGTCATGAAGTTGGAGCTCCCTTCACTCCAATATTTTGAAGACCA ACAAGGTAGCTGGGGCATGCCTGCATCCCCACTTCCTTTGCTTGAGTCTGTTGATACATTGATTCAGTCTCCTCTAACTGATCCTGCTCTGTCGGATCCT GTTTCTCCACGGAGCAGTGGTTTGTTGGAAGCAGTAATCTGGCAATCCAAAAATTTGAAAGGCTCAAATAATAATTCATTCGAACAGACACCCGGAAATT GTGTCTCCAATGAAGCAATCGACAGTTCAACCTTGAATCCTCCGATGACAGAATGTGATGAACAATGGGTGCTAAATTACCCCTTTGATCATGATATTAA GCACATATCAGTCCCACAGTTCCCACCAGCTTACTGTTCCTGGAATGATACAAAGTTGAGCAAGGTAGACCTTACAAGACCTGATGCTTTATTTGACGTT GCTTGGTATGGGAATACCACTGAGTATAGCAAGGATCAAAATGTTCCAATAAATGCTTTAGATGACTTTCTAGGTGATGATTTCCAAGGTTAACTTGCAA GCAGGTGATTTGGATATTATTGTTTTTCCCTCTGGTGCAGTACTTGTTCATGAGATGACTTATAGAAGTTCAAGTTTTTTCTATTCTCGGTCACTTTTAG AACCTTCATCTATGATTCACAATAAATTTTAGATATCTCAATTTTATAGTCTTTTGAAGTTGATGATGTGCTTTCTTTCCCACTTTGACACTTTACATGG TGCTGATATTGGAATAATGGTATTTTCAAATTGTTACATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24101; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_174084
| Blastp | Transcription factor GAMYB from Oryza sativa with 40.64% of identity |
|---|---|
| Blastx | Transcription factor GAMYB from Oryza sativa with 43.22% of identity |
| Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
| Kegg | Link to kegg annotations (4327362) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441342.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |