Id Trinity | FTRINITY_DN52183_c5_g1_i1 |
---|---|
Name Transcript | Ll_transcript_174282 |
Sequence | CGTGGTCCAATTATCTCGTCTCTCATTTTTAATAACTTCTTTATCTCTCATTGAACCCTCACATCAAGCCCATTTCTCCCTCCGCCGTGTCCATTTCCGA CCAACCACCTCTATAACCACTGCGGCTTCCACATCACCCACCGCAAATTTCTCTCTCCGCCGCGCAAACCTCCGTGACTAAATCCCTTTCGCACTATCTC TCTCCTCGTTTTCGTCCTGCTTCAGTTCCTATTCTCTCACCAGGTTTCTTTTTCTTTAGCCACCTTTTTAACTCAGGTTTCCTTGTACTGTCTCTGTCTT GGGTGCTTGCCCATTTATGGCCTACTCTGATTTCTTGAATTTGTTGTTCGCTATTGGGGTTTGGTGTACTGCTTACATTATTGTTGCATCTATTGCCACT TTTCGAGCCATCACTTTTCTTTGCACTTTCTGAACTTCAGAGGTAAACTTCTTGGAATTTGATAAGGCTATCATGGGTTATGCTCAACTTGTTATAGGCC CAGCCGGTAGTGGCAAGTCTACCTACTGCTCAAGTTTGTACGAACACTGTGTGGCTACTCGGCGAACGATACATATTGTGAACCTAGACCCTGCTGCTGA AAATTTTGACTATCCTGTCGCGATGGATATAAGGGAACTCATTTCGCTGGATGATGTTATGGAGGAACTTGGATTAGGTCCTAATGGTGGTCTTGTATAC TGCATGGAGTATCCTTTTCATCAGTTTTTAAAACTTTTATATTGTCTATCTTTTGAATCTTCTTTGAACTAGTAATTCTGCATCATTGCTTATGTCAGAT TGCCTTTGGAGATCACATTTACAATCTTATCTATCTATTTCTATGTTCCTTTTCTCTCCTTTATTTACATTCTATAGCTATTAGCTATTTAAATAATTTG ATTAGAAGTTTTGCTGCCTTAATAATCTTGTTTAGACACCTTGAAGATAACCTGGATGATTGGTTCAATGATGAACTGGACAATTATTTAGATGATGATT ACTTGGTTTTTGACTGCCCTGGCCAGATAGAACTTTATTCACATGTGCCAGTGCTTCGGAATTTTGTGGAACATTTGAAACGTAAAAATTTCAATGTTTG TGCCGTGTACTTGCTTGATTCACAGTTCATGACAGATGTGACCAAATTTATAAGTGGATGCATGGCATGCCTTTCTGCAATGGTTCAACTTGAACTTCCT CATGTTAACATCCTTTCAAAAATGGACCTTGTGACTAACAAAAAGGATGTTGAAGAATTCTTGGATCCTGAGCCCACCTTTTTACTGTCTGAATTAAATC AACGGATGGCTCCTCAGTTTGCAAAGCTGAATAAATCTTTGATTGAACTGGTGAATAATTATAGTATGGTGAGTTTTATACCACTGGATCTGAGGAAGGA GAGAAGGTAAACTCCTCTTTATCTTTTGTCTGCTTCTTATCATTGTTCTTTTTTTAAATTATCTTATATTGCTAGCATGCAAGGGATATATTTCTATTGG CTTGTATAGTTTATAGATTTATAAAAGCCATTGATGGTCATGATTCTACAATATTAAAATTGAAAGGTAGAATGTTTAAATTAAGTTGTCCCCAGGCTTG GAGCTTGTGTTTTCCAGTGCTCTTCGAAACTCTTGACTATAGATGTGACTATATAACAACAACAGGCTTGATCTCGCAAAAGGGCATCTCTAGGTTATTT GGCCAAACAAATAGAAATTACAGTGACTCAGTATGAACTGCTGACTACAGGTTTATGTCGCAAAAGAGTACGATTGATTCGATTTTCTTCACAATCATAC TGCCAAAAAGTTTCTGATGTGAATTATGCTGTGCTCTGGATTTGAAATGACAGATTTTCTGTTGTGATTGTGAATTTTAATTCAAACTTGATAATAGTTC AAGAATCTGTATTTCACTCCATCCTGACCTCCTAAGCATGTCACTCCATTCGCACCTTCAAGGCATCTCAAAAGCTTCTAATAGTTTCCAACTTTTTACT AGAAAAAAATTGCTTCTGGGTATATTGAATGAATCGGTGGAGTTTGATTCATTTGTTTCACCTTGAATACAATGCATGGTTTTTCAGATGCTATTGTCCT AGTTAGAGAGAGAAATTAAATAGGAACCTTGAAATGTGGAAACAAGCTTTAGGCACATGACTTTCATATAAATTGAAGTATGACACAGAGTATATGATGT GTAAGTTTAGCAAGATGCAGATAAACCATATTGGAGAGGTGAAAATTGGATATCATACTATACTAGAAGTCACTATTCACTAATATTGGGTGGATGAAGT GGCTGAGTGTTTTTCAGGCACCACTCAAGCTTAAGAGAATAATTTCAATGTAGCCAAGATGATAATATTATGTTACATAAATGAAAACAATAGACAAGAT AAAATTACAAATGAATGCATTAGGAAGAAAGTTGGGATAACTTTTAGTGTAAAAAAGATGATAGAGTAACGCCTTAGGTGGTTTCGACATGGGTGGAGGA AATTGTTGGAAACCTCACTGCCCTAGTAAAGAGACTAGATCAAATGAAGGTCAGTCTAATCCCCAGAGGCAGAGGGAGTTCAAAAAAATCATAGGCAAAA CTATTAGAAAATAGTTAGAGATTGTTTTGCCAATGGACATGATTGATGATAAAGAATTATGATGTCGTTTGATTCATGTAACTGATCCTTCCTAGTGGGA TTAAGGCTTGTTTGTTGTGTTTTACCTTGAATGCAGCTTGAGTGTATCTGTATTTGAAGGATGGGTGGCCTATGAAAGAACTCAATTGATTTATTTTTAC AAGGCTATGAAGTGTGTTTATGTTCATTAATTTGAAAAGTTATGCTTATTTAATTCTAATAAGTTTTTTATCAATTAAATCTAGCCCTTGAATTAACCCA AGTATAATAGGTCATCTTTTGGTGAACTAGCCAAGAACTTTGTACTCTACTTGTTATTAAGCACATGGGGTAGTAGTACAAGCCATTAAATTCTATTAAG TTTTCTTTGCTTCATCAACTCAAACCTACACAAAATACAAACTATTTTGCTATATATTTAATTTTGGATTTTGTCAATGACAGTATACAATATGTATTGG CCCA BLAST |
Tissue | flowers |
Gene name | LI_gene_24114; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_174282
Blastp | GPN-loop GTPase 3 from Xenopus with 66.3% of identity |
---|---|
Blastx | GPN-loop GTPase 3 from Debaryomyces with 48.5% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (734520) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449856.1) |
Pfam | Conserved hypothetical ATP binding protein (PF03029.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |