| Id Trinity | FTRINITY_DN52183_c5_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_174288 |
| Sequence | CGTGGTCCAATTATCTCGTCTCTCATTTTTAATAACTTCTTTATCTCTCATTGAACCCTCACATCAAGCCCATTTCTCCCTCCGCCGTGTCCATTTCCGA CCAACCACCTCTATAACCACTGCGGCTTCCACATCACCCACCGCAAATTTCTCTCTCCGCCGCGCAAACCTCCGTGACTAAATCCCTTTCGCACTATCTC TCTCCTCGTTTTCGTCCTGCTTCAGTTCCTATTCTCTCACCAGGTTTCTTTTTCTTTAGCCACCTTTTTAACTCAGAGGTAAACTTCTTGGAATTTGATA AGGCTATCATGGGTTATGCTCAACTTGTTATAGGCCCAGCCGGTAGTGGCAAGTCTACCTACTGCTCAAGTTTGTACGAACACTGTGTGGCTACTCGGCG AACGATACATATTGTGAACCTAGACCCTGCTGCTGAAAATTTTGACTATCCTGTCGCGATGGATATAAGGGAACTCATTTCGCTGGATGATGTTATGGAG GAACTTGGATTAGGTCCTAATGGTGGTCTTGTATACTGCATGGAGTATCCTTTTCATCAGTTTTTAAAACTTTTATATTGTCTATCTTTTGAATCTTCTT TGAACTAGTAATTCTGCATCATTGCTTATGTCAGATTGCCTTTGGAGATCACATTTACAATCTTATCTATCTATTTCTATGTTCCTTTTCTCTCCTTTAT TTACATTCTATAGCTATTAGCTATTTAAATAATTTGATTAGAAGTTTTGCTGCCTTAATAATCTTGTTTAGACACCTTGAAGATAACCTGGATGATTGGT TCAATGATGAACTGGACAATTATTTAGATGATGATTACTTGGTTTTTGACTGCCCTGGCCAGATAGAACTTTATTCACATGTGCCAGTGCTTCGGAATTT TGTGGAACATTTGAAACGTAAAAATTTCAATGTTTGTGCCGTGTACTTGCTTGATTCACAGTTCATGACAGATGTGACCAAATTTATAAGTGGATGCATG GCATGCCTTTCTGCAATGGTTCAACTTGAACTTCCTCATGTTAACATCCTTTCAAAAATGGACCTTGTGACTAACAAAAAGGATGTTGAAGAATTCTTGG ATCCTGAGCCCACCTTTTTACTGTCTGAATTAAATCAACGGATGGCTCCTCAGTTTGCAAAGCTGAATAAATCTTTGATTGAACTGGTGAATAATTATAG TATGGTGAGTTTTATACCACTGGATCTGAGGAAGGAGAGAAGGTAAACTCCTCTTTATCTTTTGTCTGCTTCTTATCATTGTTCTTTTTTTAAATTATCT TATATTGCTAGCATGCAAGGGATATATTTCTATTGGCTTGTATAGTTTATAGATTTATAAAAGCCATTGATGGTCATGATTCTACAATATTAAAATTGAA AGGTAGAATGTTTAAATTAAGTTGTCCCCAGGCTTGGAGCTTGTGTTTTCCAGTGCTCTTCGAAACTCTTGACTATAGATGTGACTATATAACAACAACA GGCTTGATCTCGCAAAAGGGCATCTCTAGGTTATTTGGCCAAACAAATAGAAATTACAGTGACTCAGTATGAACTGCTGACTACAGGTTTATGTCGCAAA AGAGTACGATTGATTCGATTTTCTTCACAATCATACTGCCAAAAAGTTTCTGATGTGAATTATGCTGTGCTCTGGATTTGAAATGACAGATTTTCTGTTG TGATTGTGAATTTTAATTCAAACTTGATAATAGTTCAAGAATCTGTATTTCACTCCATCCTGACCTCCTAAGCATGTCACTCCATTCGCACCTTCAAGGC ATCTCAAAAGCTTCTAATAGTTTCCAACTTTTTACTAGAAAAAAATTGCTTCTGGGTATATTGAATGAATCGGTGGAGTTTGATTCATTTGTTTCACCTT GAATACAATGCATGGTTTTTCAGATGCTATTGTCCTAGTTAGAGAGAGAAATTAAATAGGAACCTTGAAATGTGGAAACAAGCTTTAGGCACATGACTTT CATATAAATTGAAGTATGACACAGAGTATATGATGTGTAAGTTTAGCAAGATGCAGATAAACCATATTGGAGAGGTGAAAATTGGATATCATACTATACT AGAAGTCACTATTCACTAATATTGGGTGGATGAAGTGGCTGAGTGTTTTTCAGGCACCACTCAAGCTTAAGAGAATAATTTCAATGTAGCCAAGATGATA ATATTATGTTACATAAATGAAAACAATAGACAAGATAAAATTACAAATGAATGCATTAGGAAGAAAGTTGGGATAACTTTTAGTGTAAAAAAGATGATAG AGTAACGCCTTAGGTGGTTTCGACATGGGTGGAGGAAATTGTTGGAAACCTCACTGCCCTAGTAAAGAGACTAGATCAAATGAAGGTCAGTCTAATCCCC AGAGGCAGAGGGAGTTCAAAAAAATCATAGGCAAAACTATTAGAAAATAGTTAGAGATTGTTTTGCCAATGGACATGATTGATGATAAAGAATTATGATG TCGTTTGATTCATGTAACTGATCCTTCCTAGTGGGATTAAGGCTTGTTTGTTGTGTTTTACCTTGAATGCAGCTTGAGTGTATCTGTATTTGAAGGATGG GTGGCCTATGAAAGAACTCAATTGATTTATTTTTACAAGGCTATGAAGTGTGTTTATGTTCATTAATTTGAAAAGTTATGCTTATTTAATTCTAATAAGT TTTTTATCAATTAAATCTAGCCCTTGAATTAACCCAAGTATAATAGGTCATCTTTTGGTGAACTAGCCAAGAACTTTGTACTCTACTTGTTATTAAGCAC ATGGGGTAGTAGTACAAGCCATTAAATTCTATTAAGTTTTCTTTGCTTCATCAACTCAAACCTACACAAAATACAAACTATTTTGCTATATATTTAATTT TGGATTTTGTCAATGACAGTATACAATATGTATTGGCCCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24114; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_174288
| Blastp | GPN-loop GTPase 3 from Xenopus with 66.3% of identity |
|---|---|
| Blastx | GPN-loop GTPase 3 from Debaryomyces with 48.5% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (734520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449856.1) |
| Pfam | Conserved hypothetical ATP binding protein (PF03029.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |