| Id Trinity | FTRINITY_DN52190_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_174376 |
| Sequence | TGACTTATGATGTTATGTTTTTGTGGTCAATATCATTAGGCTTCTTGTGCTAGCTACTCGCTTTGCAACCAAGATGCTTCGTAAATATGGTTTGCTACAA CATAAAAGAGATACATGCATAGCAGAGGCTCTTAACAAGACAGGATTACTTTCTCTTCCCCCAATCGAACCAGTTAAACTTCAAACGGAGGTGGATTATG CTCGAAAACTGCGAGAGATGGCTCGCTTCTTGGAGATCATCCGGAATCTGCAATCTAGGCTTAGGCCAATATTCCAAAGGGCTGACAGTGGAAAAGAGTC ATCTTTAATGAGTAGGGAAATGTTGCAGGAAGAATCTCAACTGTCAGCTCTTCCATCAGATCTAGTGTCATTGGAGATGTTGAACCAACATGACTTTCCT TATCCTCTACCTGCACCGCACAGCGACAATAATGAGAATCTCACACTGGTGCCTGTTGACTCGAACTCCCACTTGGTCTCAGAAGAATTTCATTTTACCC CATCAGGAGGAATTTTGGAAAAGAAGGGCTTGCCTGTGGAAAATCCAAAAGAGATGATGGCACGCTGGAAGGTAGATAAACTGGACCTTAAGACTGTGGT TAAAGATGCTCTGCTCTCTGGTCGTCTCCCTTTGGCAGTTCTTCAACTGCATCTTCATCAGTTGGAAGATTTTGTTGTTGACAAAGAGCCCCATGATACT TTCACTGCAATTCGTGACATTGGCAGAGCTGTTGCTTATGATTTATTTTTGAAGGGCGAAACTGATCTTGCCGTTGCAACACTTCAAAGACTTGGAGAGA ACATTGAATCCTCTCTCAAACAACTTTTGTTTGGCACTGTAAGGAGATCTCTACGAGCCCTCATTGCTAACGAAATGAAAAGATATGAATATCTAGGGCC ATATGAGTGGAAGATATTGGAAGACATGTCAATGATTGAGAGTCGCTATCCTAGTAGCAGTTTCTGGAAAACATATCATCGCCGGCTGAAAGATACCAGT GTTCCATCAGACTCTGTTTCACCATTAGAAATCCAATTAAGGCTCTTGCATAACCATTCATTTGATGGCCACGTCATTGAATGCGGTGAGATTGATGGAA TTGTGTTAGATTCGTGGATGAATATTAATGGAAGTTCCTGTTCTACGGAAGTTGATGAAGATGATGCTCATGCTGGATATTGGGCTGCTGCTGCTGTCTG GTTTGATGCTTGGGAGCAAAGAACTGTTGATCGTATGATATTGGATGAACGTTTGCCTTCGGGTATTGCTTTGTTGTGGGAATCACAACTTGAATATCAC ATAGGCCGCAATAATTGGAAGGAAGTCTCTACACTGCTCGACGTGATGCCTTCATATGTTCTATCTACTGGAAGCCTTCAACTTAATTTGGATGTTTTAC AGCCTGCCTCATCTTTTGGATGCAATATGAAGTCTTCAAATTTTGGAAGTTTCTTTGTCTCTCATGAAGAATTAGATTCTGTATGCATGGTAATACCAGA CGTCCAAATATATAGGTTTTCACCCGATGTATGCTCTCGGTGGTTGAGGATTCTTCTGGAAGAAAAACTTGCAAAAAGATTTATATTCTTGAAGGAATAT TGGGAAGGAACAATGGAGATGATAGCTCTTTTGGCTCGTTCAGGTTTCATTTCTGGCAGAGATCAGATCTTGTTTGAGGATATTCATGTTGAAACTTCAT CAAATAGAGATGGAGCTGTACAAGCTATGCATAAAATGTTGGTACAACACTGTGCACAGTATAACTTGCCAAATCTTTTAGGCCTTTACCTTGACCATTA TAATTTGGTCCTTGATCAAAATTCACTTTACGCATTACAGGAAACTGCAGTTGGTTGTCAATGGGCTAGATGGCTACTCTTATCTAGGGTAAAGGGGTGT GAATATAAGGCCTCAATTGCCAATGCTCGTTCAATAATGTCAAATAATTTGGTGCCTGGAAATGACCTCAGTGTTCTGGAGTTAGATGAAATAATTCGTA CCGTTGATGACATTGCTGAAGGAGGGGGAGAAATGGCAGCTCTGGCAACCCTGATGCATGCTGCTGCCCCCATTCAAAGCTGCTTAAATAGTGGTGGTGT AAATAGGCATAGTAATTCCTCTGCCCAGTGCACATTGGAGAATCTTAGGCCTTCTTTGCAACGGTTTCCCACATTATGGCGCACACTTGTAGCAGCATGC CTTGGACAAGATACCCTGAGCTTGTTGGTGCCCAAAGCAAAAAGTGTTTTGTCGGACTATCTTAGTTGGCGTGATGACATCTTTTTCTCCACTGGACGTG ATACATCACTTCTACAAATGCTTCCATGCTGGTTTCCTAAGCCTATACGGAGATTGATACAGATTTATGTCCAGGGCCCTCTCGGATGCCAGACACTTTC AGGGTTCCCTACTGGGGAAACTTTGTTACATAGAGACATTGATTTATTCATAAATGCTGATGTGCATTCTGATATAAGTGCACTCTCCTGGGAGGCAACT ATACAAAGGCACATTCAAGAAGAGCTACATGGTCCTTTACTTGAGGAAAATGGACTTGGGCTTGAGCATCATTTGCACCGTGGACGAGCACTGGCAGCTT TTAACCAAATTCTTTCCCATAGAATTCAAAGTCTGAAATCAGAAGGGGAAGCCAGCACTTCAGCTCATGGACAGACTAACACTCAATCCGATGTGCAAAG ACTTCTCTCACCATTAGGACAAAGCGAAGAGACTCTCCTTTCATCTGTTTTGCCAATTGCTATTATGCATTTTGAGGATTCTATGCTCGTTGCTTCATGT GCTTTTCTTCTGGAGCTTTGTGGTTTGTCTGCCAGCATGATGCACACTGATATTGCTGTGCTAAAACGGATATCTTCTTTCTACAAATCAAGTGAAAATA ATGAAAATCTTAGGCAATTATCACCGAAGGGATCTGTTTTTCATGCAATGTCTCATGAAGGCGATGTAACAGAATCTCTTGCTCGAGCTCTAGCTGATGA ATATTTGCACAGGGATTCCCCTGTAATTGCCACTGAGACAGTTGCCCCCAGTAAAAGACCTTCAAGAGCTCTTATGCTGGTCTTGCACCATTTGGAAAAG TCAAGCCTTCCACAATTGGTTGATGGAAATACCTATGGGTCATGGCTATTAAGTGGAAATGGTGATGGAACTGAGTTAAGATCTCAACGAAAGGCTGCTA GCCAGCACTGGACATTGGTAACAAATTTCTGTAGGACTCACCAGCTTCCCTTAAGTACTAAGTACCTTGCTGTATTAGCTAGAGACAATGACTGGATTGA ATTTTTGTCTGAAGCCCAGATTGGAGGATATTCATTTGATACAGTGGTCCAAGTGGCATCAAAGGAGTTTAGTGATCCACGTTTCAGACTTCATATGTTG ACAGTTTTGAGAGGAATGCAGTCAAAGAAAAAGGCAAGCTCTGTATCGGCCTTGGATACACTGGAGAAAGGCGATGAAACAAACTTTCCTGATGAAAATA TGTGTATTCCAGTTGAAATCTTCCAAATATTAGCAGAGTGTGAAAAGCAAAAAAGTCCTGGAGAGGCTCTCTTGATGAAAGCAAAAGAGTTGTCCTGGTC AATATTAGCAATGGTTGCTTCTTGTTTCTCTGATGTCTCTTCATTATCATGCCTCACAGTTTGGTTGGAAATTACTGCAGCAAGAGAAACTTCATCCATC AAGGTGAATGATATTGCTTCCCAGATTGCAGATAATGTTGGAGCGGCTGTAAATGCAACTAATGCCCTCCCTCTAAGCGATAGAGTCCTTACATTTCATT ACAATAGGCAGAGTCCTAAACGTCGACGGTTAATGACACCCATTTCACTAGACTCCTCTACTTCTGCAATATCTGATATTGGAAGCACTTCTATTGGTGA AAAAATATTTGATTCCCAAGATAACACTACAGATGATAAAAAAAGAGTAGAAAATTCTGGATCCATTGACATTGCAAGCGATTCTGGTGAAGGGCCTGCT TCTCTTTCCAAGATGGTTGCAGTGCTTTGTGAACAGCAGTTATTCTTGCCTTTGCTGAGGGCATTTGAGATGTTCCTTCCATCATGCCCCTTGTTGCCGT TCATCCGTGCTCTTCAGGCATTCTCGCAAATGCGCCTTTCAGAAGGTTCTGCACATTTGGGCTCCTTTTCTGCACGAATTAAGGATGAACCAATCTACTT GCAGGCAAATATAGGAAGGGAAGGGCAGATTGGAACATCATGGATTAGTTCTACTGCTTCAAAGGCTGCAGATGCTGTGCTTTCGACTTGCCCCTCTCCA TATGAAAAAAGATGCTTACTGCAACTTCTTGCTGCCACTGACTTTGGTGATGGTGGATATGCAGCAGCGTACTATCGAAGGGCTTATTGGAAAATTAGTT TAGCAGAGCCTCTACTTCGTAAAGATGATGAGTTACACTTAGATAATGAAACATTGGATGATGCCTCACTCTTGTCTGCACTAGAAAAGAATAGGCACTG GGAGCAGGCAAGGAACTGGGCCAAGCAGTTGGAGGCAAGTGGTTCACCCTGGAAATCTGCAATACATCATGTTACTGAATCTCAGGCTGAATCTATGGTA GCTGAATGGAAGGAGTTCCTTTGGGATGTGCCAGAAGAGAGGGTTGCTTTATGGAGCCACTGCCACACACTATTCATCAGATATTCCTTTCCTTCTCTCC AAGCTGGATTGTTTTTCCTTAAGCATGCCGAAGCAGTAGAGAAAGACCTTCCTGCTAGAGAGCTTCATGAGCTGTTATTGCTTTCTCTGCAATGGCTGAG TGGGATGATAAGTCTTTCCAACCCTGTGTGCCCATCACATCTTCTGCGTGAAATTGAAACCAAAGTATGGCTCTTAGCTGTTGAGTCTGAAACTCAGGTG AAGAATGAAGGAGACTTCAATTTTACCTTTTCTACCAGGGAGAATGCCGTCAAGAATGATTCCAGTATTATTGATCGAGCTGCAAGTATAATAGCAAAGA TGGACAACCATATAAATACAATGAGAAATAGATCTGTAGAAAAATATGAGTCAAGGGAAAGTAACCAAATCCCTCACAAGAATCAAGTGGTGGATACTGG TCTTTCAACTACATTTGCTGGGGGTACAAAGACAAAAAGAAGGGCTAAAGGGTACATCGCATCAAGGCGCCCACCTATTGAATCAACAGATAAAAATGCC GATACTGATGATGGTTCTGGTACTCTTGGTGTAAAAAGTGAGCTGCAGATTCAAGAAGTAAACTTAAAAGTGGAAATGTCTTTCTCTAGGTGGGAGGAAA GGGTTGGAGCAGCAGAGCTGGAAAGGGCTGTACTTTCTTTGTTGGAATGTGGTCAAATTGCTGCCGCCAAGCAGCTACAACATAAGTTCTCTCCTGAAAA AACACCAACTGAATTTAGACTTGTGGATGCAGCTTTGAAGCTTGCTGCTATTTCGACTCCTCCTGGCAATGTATCTACGTCAATGCTTGACGAGGAAGTC CATTCGGTTATGCAATCGTATGGTGTACTGAATGACAAACACCATGTTGACCCACTGCAGGTTTTGGAGAGTCTGGTGGCCATTTTTACTGAAGGTAGTG GGCGTGGTCTATGCAAAAGAATAATAGCAGTTATAAAAGCTGCAAATGCCTTGGGCCTACTATTTTTTGAGGCGTTTAACAAGCAACCGATTGAGCTGCT GCAGCTGCTTTCTCTTAAAGCGCAGGAGTCCTTTGAGGAGGCAAACTTTCTTGTGCAGACTCATCCGATGTCAGCTGCAAGTATTGCTCAGATACTTGCT GAATCTTTCCTAAAGGGTGTGTTGGCTGCACATCGTGGAGGATATATGGAGTCACAAAAGGAGGAAGGACCTGCTCCGCTTCTGTGGAGATTTTCAGACT TTTTGAAGTGGGCAGAGCTTTGCCCGTCTGAACCAGAAATTGGGCATGCATTAATGCGTTTGGTGATTACTGGACAAGAAATACCGCATGCCTGTGAGGT TGAGCTTCTTATTCTGTCCCACCACTTCTACAAATCATCTGCTTGCCTTGATGGAGTTGATGTTCTTGTGGCCCTTGCCACGACCAGGGTTGATGCTTAC GTCTTGGAGGGTGATTTTCCATGTTTGGCTCGCCTGATAACAGGAGTCGGAAATTTTTATGCTCTCAATTTCATTCTTGCCATTCTTATAGAAAACGGTC AATTGGATCTTCTTCTTCAGAAGTATTCTGCTGCTGCAGACACAAACACAGGAACTGCTGAGGCTGTCAGAGGATTTCGGATGGCTGTTCTTACATCTTT GAAGCATTTCAACCCTAATGACCTTGATGCATTTGCCATGGTCTACAATCATTTTGATATGAAACATGAGACAGCAGCTCTTTTAGAGTCACGTGCAGAG CAATCAGCTGAGCAGTGGTCCCGCCGCTACAACAAGGACCACAATGAAGACTTATTGGATTCTATGCGCTACTACATTGAAGCAGCTGAAGTTCACTCTT CCATCGATGCTGGCAACAAAACACGTAGAGATTGTGCTCAGGCTTCCCTTCTGTCTCTTCAGATTCGAATGCCAGATTTCCAGTGGCTTTATCGATCAGA AACCAATGCTAGGCGAGCACTAGTTGAGCAGTCTCGTTTTCAAGAGGCTTTAATCGTAGCTGAAGCTTATAACCTGAACCAGCCAAGTGAATGGTCTTTA GTACTATGGAACCAAATGCTCAAACCTGAAGTGATGGAAGAGTTTGTGGCTGAATTTGTGGCAGTTCTACCTCTTCAGCCATCAATGCTGATTGATTTAG CTAGATTCTATAGAGCCGAAGTGGCTGCCAGAGGGGACCAATCCCATTTCTCTGTCTGGCTCACAGGGGGGGGGTTGCCAGCTGATTGGGCTAAATATTT AGGACGATCATTCAGATGCTTATTAAAGCGGACAAGAGATTTGAGGCTGCGAGTGCAGTTAGCTACAGTGGCAACTGGATTTGGGGATGTCACTGATGCA TGCAATGAAGAATTGGATAAGGTCCCGGACAACGCGGCACCACTAGTGCTGAGGAAGGGTCATGGTGGAGCTTACCTCCCTTTAATGTGAAACTTTCTAC TGCAGATTATCATATATGATTGGACAAACTACAATTGACATGAAATTGGTTCTTGACTTCTAGTGCTGGTGTGAAATCAATTAAGTGACTATTGCTGCAA ACATGAAGGGTACCTGAGTATAAACCAAAAACGCAGACAAAATGAAAATTGGATGATTAGTTCATATACCTTAGAGCAAGATGTTTATTTACAATTTTTT GTTGATTGAGTAAACACTTGATGGTTGTACATTAGGCCACTGTATCTGTAGCTCATTCTTGTAAACACTGTTCTAGTTTTGTTTTCTCCATATATTTTTT GAAGGGAGGCAGGGAGCATAGAGTGGTTTATTGTTGATTTTGAAATCAGTAGAATAGAATGTCCCATTAATTTATGATGCTGTTCTCCCCTCACAAAGTG TATAGTGTTCCTGTACATCAATATAAAAAAAAATTCATTTGCCTTGTCCCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24151; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_174376
| Blastp | Protein DDB_G0268328 from Dictyostelium with 24.92% of identity |
|---|---|
| Blastx | Protein DDB_G0268328 from Dictyostelium with 26.72% of identity |
| Eggnog | spastic paraplegia 11 (autosomal recessive)(ENOG410XR4T) |
| Kegg | Link to kegg annotations (DDB_G0268328) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462547.1) |
| Pfam | Spatacsin C-terminus (PF14649.5) |
| Rfam | - |
| GO | - |