| Id Trinity | FTRINITY_DN52190_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_174377 |
| Sequence | TGACTTATGATGTTATGTTTTTGTGGTCAATATCATTAGGCTTCTTGTGCTAGCTACTCGCTTTGCAACCAAGATGCTTCGTAAATATGGTTTGCTACAA CATAAAAGAGATACATGCATAGCAGAGGCTCTTAACAAGACAGGATTACTTTCTCTTCCCCCAATCGAACCAGTTAAACTTCAAACGGAGGTGGATTATG CTCGAAAACTGCGAGAGATGGCTCGCTTCTTGGAGATCATCCGGAATCTGCAATCTAGGCTTAGGCCAATATTCCAAAGGGCTGACAGTGGAAAAGAGTC ATCTTTAATGAGTAGGGAAATGTTGCAGGAAGAATCTCAACTGTCAGCTCTTCCATCAGATCTAGTGTCATTGGAGATGTTGAACCAACATGACTTTCCT TATCCTCTACCTGCACCGCACAGCGACAATAATGAGAATCTCACACTGGTGCCTGTTGACTCGAACTCCCACTTGGTCTCAGAAGAATTTCATTTTACCC CATCAGGAGGAATTTTGGAAAAGAAGGGCTTGCCTGTGGAAAATCCAAAAGAGATGATGGCACGCTGGAAGGTAGATAAACTGGACCTTAAGACTGTGGT TAAAGATGCTCTGCTCTCTGGTCGTCTCCCTTTGGCAGTTCTTCAACTGCATCTTCATCAGTTGGAAGATTTTGTTGTTGACAAAGAGCCCCATGATACT TTCACTGCAATTCGTGACATTGGCAGAGCTGTTGCTTATGATTTATTTTTGAAGGGCGAAACTGATCTTGCCGTTGCAACACTTCAAAGACTTGGAGAGA ACATTGAATCCTCTCTCAAACAACTTTTGTTTGGCACTGTAAGGAGATCTCTACGAGCCCTCATTGCTAACGAAATGAAAAGATATGAATATCTAGGGCC ATATGAGTGGAAGATATTGGAAGACATGTCAATGATTGAGAGTCGCTATCCTAGTAGCAGTTTCTGGAAAACATATCATCGCCGGCTGAAAGATACCAGT GTTCCATCAGACTCTGTTTCACCATTAGAAATCCAATTAAGGCTCTTGCATAACCATTCATTTGATGGCCACGTCATTGAATGCGGTGAGATTGATGGAA TTGTGTTAGATTCGTGGATGAATATTAATGGAAGTTCCTGTTCTACGGAAGTTGATGAAGATGATGCTCATGCTGGATATTGGGCTGCTGCTGCTGTCTG GTTTGATGCTTGGGAGCAAAGAACTGTTGATCGTATGATATTGGATGAACGTTTGCCTTCGGGTATTGCTTTGTTGTGGGAATCACAACTTGAATATCAC ATAGGCCGCAATAATTGGAAGGAAGTCTCTACACTGCTCGACGTGATGCCTTCATATGTTCTATCTACTGGAAGCCTTCAACTTAATTTGGATGTTTTAC AGCCTGCCTCATCTTTTGGATGCAATATGAAGTCTTCAAATTTTGGAAGTTTCTTTGTCTCTCATGAAGAATTAGATTCTGTATGCATGGTAATACCAGA CGTCCAAATATATAGGTTTTCACCCGATGTATGCTCTCGGTGGTTGAGGATTCTTCTGGAAGAAAAACTTGCAAAAAGATTTATATTCTTGAAGGAATAT TGGGAAGGAACAATGGAGATGATAGCTCTTTTGGCTCGTTCAGGTTTCATTTCTGGCAGAGATCAGATCTTGTTTGAGGATATTCATGTTGAAACTTCAT CAAATAGAGATGGAGCTGTACAAGCTATGCATAAAATGTTGGTACAACACTGTGCACAGTATAACTTGCCAAATCTTTTAGGCCTTTACCTTGACCATTA TAATTTGGTCCTTGATCAAAATTCACTTTACGCATTACAGGAAACTGCAGTTGGTTGTCAATGGGCTAGATGGCTACTCTTATCTAGGGTAAAGGGGTGT GAATATAAGGCCTCAATTGCCAATGCTCGTTCAATAATGTCAAATAATTTGGTGCCTGGAAATGACCTCAGTGTTCTGGAGTTAGATGAAATAATTCGTA CCGTTGATGACATTGCTGAAGGAGGGGGAGAAATGGCAGCTCTGGCAACCCTGATGCATGCTGCTGCCCCCATTCAAAGCTGCTTAAATAGTGGTGGTGT AAATAGGCATAGTAATTCCTCTGCCCAGTGCACATTGGAGAATCTTAGGCCTTCTTTGCAACGGTTTCCCACATTATGGCGCACACTTGTAGCAGCATGC CTTGGACAAGATACCCTGAGCTTGTTGGTGCCCAAAGCAAAAAGTGTTTTGTCGGACTATCTTAGTTGGCGTGATGACATCTTTTTCTCCACTGGACGTG ATACATCACTTCTACAAATGCTTCCATGCTGGTTTCCTAAGCCTATACGGAGATTGATACAGATTTATGTCCAGGGCCCTCTCGGATGCCAGACACTTTC AGGGTTCCCTACTGGGGAAACTTTGTTACATAGAGACATTGATTTATTCATAAATGCTGATGTGCATTCTGATATAAGTGCACTCTCCTGGGAGGCAACT ATACAAAGGCACATTCAAGAAGAGCTACATGGTCCTTTACTTGAGGAAAATGGACTTGGGCTTGAGCATCATTTGCACCGTGGACGAGCACTGGCAGCTT TTAACCAAATTCTTTCCCATAGAATTCAAAGTCTGAAATCAGAAGGGGAAGCCAGCACTTCAGCTCATGGACAGACTAACACTCAATCCGATGTGCAAAG ACTTCTCTCACCATTAGGACAAAGCGAAGAGACTCTCCTTTCATCTTTGATGATCAACACTGAAATTGGTAGTGATCATTCCCAAGTCCAGCGTTCAAAT GAATCTATTTGGCCAAACTTCTGAGCACTTGACTTTGAAACCTTGTGAACTTAAAAGGTTAAGCTGTATAGTGAAAGGACATGAATGGTTTTACATCATT GACCGTATCAATTGATCTACCATAAGGTTTTGCCAATTGCTATTATGCATTTTGAGGATTCTATGCTCGTTGCTTCATGTGCTTTTCTTCTGGAGCTTTG TGGTTTGTCTGCCAGCATGATGCACACTGATATTGCTGTGCTAAAACGGATATCTTCTTTCTACAAATCAAGTGAAAATAATGAAAATCTTAGGCAATTA TCACCGAAGGGATCTGTTTTTCATGCAATGTCTCATGAAGGCGATGTAACAGAATCTCTTGCTCGAGCTCTAGCTGATGAATATTTGCACAGGGATTCCC CTGTAATTGCCACTGAGACAGTTGCCCCCAGTAAAAGACCTTCAAGAGCTCTTATGCTGGTCTTGCACCATTTGGAAAAGTCAAGCCTTCCACAATTGGT TGATGGAAATACCTATGGGTCATGGCTATTAAGTGGAAATGGTGATGGAACTGAGTTAAGATCTCAACGAAAGGCTGCTAGCCAGCACTGGACATTGGTA ACAAATTTCTGTAGGACTCACCAGCTTCCCTTAAGTACTAAGTACCTTGCTGTATTAGCTAGAGACAATGACTGGATTGAATTTTTGTCTGAAGCCCAGA TTGGAGGATATTCATTTGATACAGTGGTCCAAGTGGCATCAAAGGAGTTTAGTGATCCACGTTTCAGACTTCATATGTTGACAGTTTTGAGAGGAATGCA GTCAAAGAAAAAGGCAAGCTCTGTATCGGCCTTGGATACACTGGAGAAAGGCGATGAAACAAACTTTCCTGATGAAAATATGTGTATTCCAGTTGAAATC TTCCAAATATTAGCAGAGTGTGAAAAGCAAAAAAGTCCTGGAGAGGCTCTCTTGATGAAAGCAAAAGAGTTGTCCTGGTCAATATTAGCAATGGTTGCTT CTTGTTTCTCTGATGTCTCTTCATTATCATGCCTCACAGTTTGGTTGGAAATTACTGCAGCAAGAGAAACTTCATCCATCAAGGTGAATGATATTGCTTC CCAGATTGCAGATAATGTTGGAGCGGCTGTAAATGCAACTAATGCCCTCCCTCTAAGCGATAGAGTCCTTACATTTCATTACAATAGGCAGAGTCCTAAA CGTCGACGGTTAATGACACCCATTTCACTAGACTCCTCTACTTCTGCAATATCTGATATTGGAAGCACTTCTATTGGTGAAAAAATATTTGATTCCCAAG ATAACACTACAGATGATAAAAAAAGAGTAGAAAATTCTGGATCCATTGACATTGCAAGCGATTCTGGTGAAGGGCCTGCTTCTCTTTCCAAGATGGTTGC AGTGCTTTGTGAACAGCAGTTATTCTTGCCTTTGCTGAGGGCATTTGAGATGTTCCTTCCATCATGCCCCTTGTTGCCGTTCATCCGTGCTCTTCAGGCA TTCTCGCAAATGCGCCTTTCAGAAGGTTCTGCACATTTGGGCTCCTTTTCTGCACGAATTAAGGATGAACCAATCTACTTGCAGGCAAATATAGGAAGGG AAGGGCAGATTGGAACATCATGGATTAGTTCTACTGCTTCAAAGGCTGCAGATGCTGTGCTTTCGACTTGCCCCTCTCCATATGAAAAAAGATGCTTACT GCAACTTCTTGCTGCCACTGACTTTGGTGATGGTGGATATGCAGCAGCGTACTATCGAAGGGCTTATTGGAAAATTAGTTTAGCAGAGCCTCTACTTCGT AAAGATGATGAGTTACACTTAGATAATGAAACATTGGATGATGCCTCACTCTTGTCTGCACTAGAAAAGAATAGGCACTGGGAGCAGGCAAGGAACTGGG CCAAGCAGTTGGAGGCAAGTGGTTCACCCTGGAAATCTGCAATACATCATGTTACTGAATCTCAGGCTGAATCTATGGTAGCTGAATGGAAGGAGTTCCT TTGGGATGTGCCAGAAGAGAGGGTTGCTTTATGGAGCCACTGCCACACACTATTCATCAGATATTCCTTTCCTTCTCTCCAAGCTGGATTGTTTTTCCTT AAGCATGCCGAAGCAGTAGAGAAAGACCTTCCTGCTAGAGAGCTTCATGAGCTGTTATTGCTTTCTCTGCAATGGCTGAGTGGGATGATAAGTCTTTCCA ACCCGTATGGAACATATGGAGAATTACTTTCTTTTTCAATTTGAGTTAATATATGTACTTATCATGCTGCTAAACTTTTCAGTGTGTGCCCATCACATCT TCTGCGTGAAATTGAAACCAAAGTATGGCTCTTAGCTGTTGAGTCTGAAACTCAGGTGAAGAATGAAGGAGACTTCAATTTTACCTTTTCTACCAGGGAG AATGCCGTCAAGAATGATTCCAGTATTATTGATCGAGCTGCAAGTATAATAGCAAAGATGGACAACCATATAAATACAATGAGAAATAGATCTGTAGAAA AATATGAGTCAAGGGAAAGTAACCAAATCCCTCACAAGAATCAAGTGGTGGATACTGGTCTTTCAACTACATTTGCTGGGGGTACAAAGACAAAAAGAAG GGCTAAAGGGTACATCGCATCAAGGCGCCCACCTATTGAATCAACAGATAAAAATGCCGATACTGATGATGGTTCTGGTACTCTTGGTGTAAAAAGTGAG CTGCAGATTCAAGAAGTAAACTTAAAAGTGGAAATGTCTTTCTCTAGGTGGGAGGAAAGGGTTGGAGCAGCAGAGCTGGAAAGGGCTGTACTTTCTTTGT TGGAATGTGGTCAAATTGCTGCCGCCAAGCAGCTACAACATAAGTTCTCTCCTGAAAAAACACCAACTGAATTTAGACTTGTGGATGCAGCTTTGAAGCT TGCTGCTATTTCGACTCCTCCTGGCAATGTATCTACGTCAATGCTTGACGAGGAAGTCCATTCGGTTATGCAATCGTATGGTGTACTGAATGACAAACAC CATGTTGACCCACTGCAGGTTTTGGAGAGTCTGGTGGCCATTTTTACTGAAGGTAGTGGGCGTGGTCTATGCAAAAGAATAATAGCAGTTATAAAAGCTG CAAATGCCTTGGGCCTACTATTTTTTGAGGCGTTTAACAAGCAACCGATTGAGCTGCTGCAGCTGCTTTCTCTTAAAGCGCAGGAGTCCTTTGAGGAGGC AAACTTTCTTGTGCAGACTCATCCGATGTCAGCTGCAAGTATTGCTCAGATACTTGCTGAATCTTTCCTAAAGGGTGTGTTGGCTGCACATCGTGGAGGA TATATGGAGTCACAAAAGGAGGAAGGACCTGCTCCGCTTCTGTGGAGATTTTCAGACTTTTTGAAGTGGGCAGAGCTTTGCCCGTCTGAACCAGAAATTG GGCATGCATTAATGCGTTTGGTGATTACTGGACAAGAAATACCGCATGCCTGTGAGGTTGAGCTTCTTATTCTGTCCCACCACTTCTACAAATCATCTGC TTGCCTTGATGGAGTTGATGTTCTTGTGGCCCTTGCCACGACCAGGGTTGATGCTTACGTCTTGGAGGGTGATTTTCCATGTTTGGCTCGCCTGATAACA GGAGTCGGAAATTTTTATGCTCTCAATTTCATTCTTGCCATTCTTATAGAAAACGGTCAATTGGATCTTCTTCTTCAGAAGTATTCTGCTGCTGCAGACA CAAACACAGGAACTGCTGAGGCTGTCAGAGGATTTCGGATGGCTGTTCTTACATCTTTGAAGCATTTCAACCCTAATGACCTTGATGCATTTGCCATGGT CTACAATCATTTTGATATGAAACATGAGACAGCAGCTCTTTTAGAGTCACGTGCAGAGCAATCAGCTGAGCAGTGGTCCCGCCGCTACAACAAGGACCAC AATGAAGACTTATTGGATTCTATGCGCTACTACATTGAAGCAGCTGAAGTTCACTCTTCCATCGATGCTGGCAACAAAACACGTAGAGATTGTGCTCAGG CTTCCCTTCTGTCTCTTCAGATTCGAATGCCAGATTTCCAGTGGCTTTATCGATCAGAAACCAATGCTAGGCGAGCACTAGTTGAGCAGTCTCGTTTTCA AGAGGCTTTAATCGTAGCTGAAGCTTATAACCTGAACCAGCCAAGTGAATGGTCTTTAGTACTATGGAACCAAATGCTCAAACCTGAAGTGATGGAAGAG TTTGTGGCTGAATTTGTGGCAGTTCTACCTCTTCAGCCATCAATGCTGATTGATTTAGCTAGATTCTATAGAGCCGAAGTGGCTGCCAGAGGGGACCAAT CCCATTTCTCTGTCTGGCTCACAGGGGGGGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24151; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_174377
| Blastp | Spatacsin from Homo with 19.1% of identity |
|---|---|
| Blastx | Protein DDB_G0268328 from Dictyostelium with 26.72% of identity |
| Eggnog | spastic paraplegia 11 (autosomal recessive)(ENOG410XR4T) |
| Kegg | Link to kegg annotations (80208) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020215794.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |