| Id Trinity | FTRINITY_DN52211_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_28957 |
| Sequence | GCCAAATGAGCATTGTACATTCCAACCTCAACTGGATTATCTTCCCTGCAAACAGTCACTCTATGTGTCATAAGCTTGTGATTGCTTGGAAAATATATAT TCGTTAAAATTTAATTTTTAAGCATTTTTCTAACCAATAGTAACTTATGGCAGGTGGAATGACACTCATTATGGGACAACAGATGTGCACCCATTAATGA AAAGGAATAACAATCGGCCAAGAGTCACAATGAGATAAAATCAATCAGCCATGAGTTACTGGAATTCCAAAAGAGGCAAAGATGCTAACCAAAAGCCTTT CAGTTACACATTTATTATCAACATAAAGAGCAATGATAAACATGAATAACCAGGTGAATAGAAGGAGTCACATAGCTCTATAAAAACACTCATAGATCAT GGAAATATTGGACTAGCTCTCAGACTATGCAACACAGTTAGAGGTGTAATACCACAGGAGATCACACATACACCTACAATAGGAAGCCATTTACTGTACA TCACAAATTCATACACAAACCCTATTATCGTATCCCTTTTCTTCTCGTGGCCGAACACAGCCACTACACAGTGCAGTGGAGATGGAAACAGAAGATAACA ACAACAGAGTGAGAATCTTCGTAGGAGGTTTAGGAGAAACCGTAACCCCTGAAGATCTTAATCGATTATTTTCTTCTCTTGGAACCGTTCATGGGATTCA AACTATCCGAACCAAAGGTCGTAGCTTTGCTTACGTTGGCTTCTTTCCTTCTCCCACCTATTCTAAATCTCTTTCCAAGCTTTTCAGCAAGTATAATGGT TGCTTGTGGAAGGGTGAAAAAATGAAACTTGAAAAGACCAAAGAAAATTATCTTGTGCGTTTGAAAAAAAGAATGGCAAAAAAAACCATATACCGCGAGG ACTTATGCAAGTGTTTTTTACTACTGTGCTGGGAGATGCCCTCATAGTTATGAGAGTGTGATCTTCTAAATGGACTCCATATCAACTGGCGTAGGAAGCA AATGAAGCCATGTGCCAAGTTTTTCAGGAGCCGGATCCCATAGACTGTGATTATTATAGAAAAGGAATTGGAAATCGTTTGGTGGATATGTACAAGGAGC ACTATGATAGTAAGTTTTGTTTTCTGTTTGTTTTTATATGGTACTGGTACAGGTTATTGATATTGATTCTAGTTAAGAGCTTGTTTTTATATTTTACTTC AGAGATTTACGTCCATATTGTTGAACCATTTTGGTTTGATGTGCAAGTCAATGAATATATCTTGGTTTTACTTCAACAAATCAAGATATTGCTTTCTTTT ACGAAGAAAACAAATTCTAGAAATAAAATTTTGATGTGGTAAGGGTCGAGAAATATTTGGATATTCGAGTTAGTCAGCAATATATGCGTTAAAGTTTCAA GCAAGCATCAAAAGCATTGGCGGGGTGCAGCTAGGAAGATGATAAGACACTCAAATTTTGATTTTAAGATACAAGTTTTTGGTTGCTTCTCCTGTTAATT GAGTTCCTTATGTTTTAACTGTTTTTTTGTTGTATCCCAAATTGATAAAGGAATATGGTAGACGTCATAGGCAATATTTTGCATCTTCCTTTCAAATTTG AATTTATCTATTGGTCAAATAAGCTCAGAAGTATTTTTTGTTTCTGCAATATAAATTGCTAAGTAGTACTAAAGCCTCATTTTGATTTTCTGTTATCATG TGATAATGTGGGATGGGTCTGGCATCTGAATTCCTATCAGACAGAAGATTGTTTATTATCGAAAATAATGCTGAACTTCTGTGTGTGTGTGTGTGTATAT GTATGCAAACCAATTTTTTTACTGTTTTGCATACCACCAATTCAACTTCTAATGTTTTGTGCAGGCATAGAGGTCCCTAAGTTTGTTGACAATGTTACTC CTCAATATAAGCCTAAATTTGAAGCACTAGTAAGAACCTTTGTGCCAACTTCTTAGTTTTTTCGATCCTCTCAGTCAAACATGTTGCATACTTAGAATTG TGTGCTATATATATGTGTTTTCTGATTGCAGTTAGTTGAGCTTAAGGAAGCGGAGCAGAAATCTTTTAAGGAATCTGAGCGTTTGGAAAAGGAAATTGCC GATGTACAGGAGTTGAAGAAAAAGCTGAGTACCATGACAGCAGATGAGTACTTTGCAAAGCACCCAGAGCTGAAAAAGAAGTTTGATGATGAGATCAGGA ATGACTACTGGGGCTATTGATTATTCAAAACTTCCAAGTGTAGCAAAACATCTCAACTTCACCAGTTGATGTTTGCGTTGCTGGTTTAATAATAATAACT ACATTTATTTATTTCTAACTCAGTTCTCATTTAAAAGCTGAGGGTTCTTCATATACCTTAATTTTGGTGGTCCTCTAGTTATTTCACTTGCAAACGTGTC TTTTGTTGTCAAGAAACTACTGCTACTGCCTTATGGTTATTGTGCAGATACAATTTCAGAAAGAATGATGTTTCCTGGTTTTCTTAATAAATTATGTTTA ATCGAATCACCAAGCACTTGCAGGTTCTTCTCAATCTGAAAATGTGGCAAGAACATTGTTTTTTTACATCTTGATAATAATATGGTTGAGTTTTTTAGAG AGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24238; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_28957
| Blastp | Nucleolar protein 8 from Mus with 31.31% of identity |
|---|---|
| Blastx | ATP synthase subunit d, mitochondrial from Arabidopsis with 61.86% of identity |
| Eggnog | nucleolar protein 8(ENOG410Y5CN) |
| Kegg | Link to kegg annotations (70930) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416983.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |