| Id Trinity | FTRINITY_DN52215_c0_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_28498 |
| Sequence | GACCGTACCCACATATTCGGTTTTTATTCCCATGCAAAAGGACTACATACGAGATAGCAAAAATGAAACTTGGAGATTTAAAAGTGAGATTTCCCTCCAC AATTTTAAACGTTAAACACAACACACAAGAAATTAGCGAGAGAAACAAGAAGTTGAAGGAAGAAGAAGAATATGAATAGGTTTTTCAACCGAGGAAGGGA TAATCCCTCCAATGCCTCACCATCTTCCTCGCCGGCGACGCCCTCTGCCTCGCCGGTCACCGGTCCGGCGAGGCCTATACGACTCGTCTATTACGATGAG AACGAGAGAAAGTTCCACATGGACCCTGAAGCCGTTGCTACGCTCCAACTCGTCAAGGAACCAATCGGCGTCGTTTCTGTCTGCGGAAGGGCTCGCCAGG GCAAGAGCTTCATTCTCAATCAGCTTCTCGGGAGGAGCAGTGGGTTTCAAGTTGCACCAACACATCGACCATGTACCAAAGGGCTTTGGCTGTGGAGTGC ACCTTTGAAGAGAACTGCTCTTGATGGAACAGAGTACAATCTCCTGCTATTAGACAGTGAGGGAATAGATGCTTATGATCAAACGGGAACGTATAGCACC CAAATCTTCTCCTTGGCTGTCCTCTTGTCTAGCATGTTCATTTATAATCAGATGGGTGCTATAGACGAGTCTTCCCTTGATCGTCTTTCTCTTGTTACTC AAATGACAAAGCACATTTGTGTTAGAGCCTCAGGAGGAAGGAGTACTGCATCTGAACTCGGGCAGTTTTCCCCAATTTTTGTTTGGCTTTTAAGAGACTT CTACTTGAACCTAGCAGAAGATAACAGAAGAATAACTCCCCGTGACTATTTGGAAATTGCTTTGAGGCCTGTTGAAGGGAGTGGAAGAGATATAGCTGCT AAAAATGAGATTCGAGATTCTGTTCGGGCTCTATTCCCAGACAGGGAATGCTTCACCCTTGTTCGACCTTTGAACAACGAAAATGATCTACAGCGTCTTG AACAGATATCGTTGGAAAAGTTACGGCCTGAATTTCGATCTGGTCTGGATTCTTTGGTCAAGTTTGTTTTTGAGAGAACAAGGCCAAAACAAGTCGGGGC AACTATGATGACAGGCCCTGTGCTGGTTGGTATTACCCAATCTTATCTGGATGCTCTCAACCATGGTGCTGTACCCACAATTTCATCCTCCTGGCAGAGT GTTGAAGAAGCTGAGTGTCGTAGAGCTTATGATTCTGCCGCTGAAGTGTATATGTCTTCTTTTGATCGTTCAAAGCCACCTGAGGAAGTTGCTTTGAGGG AAGCACATGATGAAGCAGCTCGACTTTCAGTAGCTGCGTTTAGCACTAGTGCTGTGGGAGTTGGTTCAACAAGGAATAAATATGAAGGCCTTCTACAGAA ATTCCTTAAAAAGGCATTTGAGGATTTTAAGAGGAGTGCATTTATGGAGGCTGATCTACAATGCTCAAGTGCCATACAGTCTATGGAAAAGAGGCTGAGG GCAGCTTGTAATGCTTCTGATGCCAAAATAGATAATGTTTCCAAGGTTTTGGATGCTCTTTTATGTGAATATGAAAAAACAATTCAAGGTCCAGGGAAGT GGCACAAACTTGCTGTCTTTTTACAACAAAGTTTTGAAGGCCCAGTACTAGATCTGACTAGGAGGCTAATAGATAAAGTTGTATCAGAAAAGAGTTCTCT CACTTTAAAATGTCAGTTGATTGAAGATAATTTGGCCTTGCTCAACAAGCGGATGGAAGCCAGTGAAAGGGAAAAGTCGGAGTATATTAAGCGCTATGAG GATGCTATGAAAGATAAGAAGAAGCTAGCTGAAGAATATATGAATCGCATAACTGAACTGCAGGCTAACCGTCACTCATTGGACGAGAGGTATTCTAGCT TATTAAAAACATTGGACTCTACCAAGCAAGAATCCATTGATTGGAAAAGAAAATATCAACAAGTTTTATCGAGGCAGAAAGCTGAGGAAGATAATACTAG TTCTGAATTAGCAGCCCTCAAATCCCGGAGCAGTGCTGCTGAAGCAAGGTTGGCTGCTGCAAAGGAACAATCTGAGTCTTCTCAACAGGAGGCTGAGGAG TGGAAGCGGAAGTATGACATTGCTGTTAGAGAAGCAAAAGCTGCACTAGAGAAAGCGGCAATCGTGCAGGAGCGAACTGGCAAGCAAACACAATTGAGGG AAGATGCTTTAAGAGAAGAATTTTCTGGCACATTGGCTGAAAGAGAAGATGAAATAAAGGAGAAAACTTCCAAAATTGAGCATGCTGAGCGGTGTTTAAC TACTTTGAATTTAGAATTGAAGGCTGCTGAGTCAAAAATTAGGAGTTACGAAGTGCAAACATCATCACTGGTGCTTGAAATCGAAGAGTTGTCTGAGAGG TTGAAAACTGAAAATGCCAAGGCCCAATCATTTGAGAGGGATGTGTTGGTATTTCAGCAGGAGAAGAACCATTTAGAGCAGAAGTACAGATCCGAGTTCC AAATATTTGAGGAGGTCCAGGAAAGGTGTAAAAATGCTGAAAGAGAAGCTGCAAGGGCTACTGAAGTGGCTGACAAAGCACGGGTTGAAGCAGGCATGGC CCAGAAGGAGAAGAGTGAGATGGAGAGGATTGCAATGGACAGGCTAGCACATATTGAGAGGGCTCAGAAGAAAATTGAAAGCTTGGAGAGGGAGAAATAT AATGCGGTAGATGAATTGCAAAGAGTAAGGGATTCAGAGAATGATGCACTTACCAGAGTTTCAGAACTGGAGGAAAAGGTGGAACAGAGAGAGAAGGATA TTGATGCACTTTTGGAGAAAGATGGAACAAACAGAAGAAATAACACACATATTCTTGAGCAACTTTTGGAAACAGAACGTGAAGCACATAATCAGGCAAG TAACAGGGCTGAGGCTCTTTCTATCCAGTTACAATCTGCACAAGCCAAAATTGATTCTCTTCATCAAGAGCTGACTAAGTTTCGACTGAACGAAAGAGTA TCAGACAGCAAGCTAAAAACTGCGTCTCATGGAAAGCGTTTAAGAATAGAAGATGAAATTGGTGATGAATCTATGAGTCCTAGAATAAAGGGAACTAAGA GAGCCAAGAGTACTTCTCATCCTATTGGGTACACACCTCCAGAAGATGGTGGTTCCTTTTTTGAGTGTGATGACAACATCCATAGTCTGCAAACAACTGA GGATGAATATAAAAAGTTTACCGTTCAGAAACTTAAACAAGAGCTGACAAAACACAACTACGGTGATCAGCTGCTTGCGTTGAAGAATCCCAAGAAGGAT GCTCTCCTCGCCTTGTACGAGAAATATGTTCTTCAGAGATCATAGCAGTTACGAAGAGGTCGTAGTATTACGATGAAGCATGTAATCAGAAATCATCAGC TTCAAACTCTACACAGATGTGTATTCCATATAAACCTCATTCACGTTTTATTGTGTACTAGTTATGTTTACTTGAGTTTGCTAGCAATCATCATCTGAAT TGGCCTAAGATTGATGGATGGTCTGATCCAGATTTGTTGTATGCTTAAGTTGTTTGGTTGATATTTAGTAGTTGTATTTTGTATTTATATACGATTTTTT AACCTATGTTACTAGATACATATCATAACCCCTTCATCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24262; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_28498
| Blastp | Guanylate-binding protein 6 from Pongo with 32.08% of identity |
|---|---|
| Blastx | Guanylate-binding protein 1 from Mus with 29.43% of identity |
| Eggnog | Guanylate binding protein(ENOG410XR6Z) |
| Kegg | Link to kegg annotations (100172797) |
| CantataDB | Link to cantataDB annotations (CNT0002289) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440227.1) |
| Pfam | Guanylate-binding protein, N-terminal domain (PF02263.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |