| Id Trinity | FTRINITY_DN52221_c5_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_29000 |
| Sequence | CTCAATCCAAAAAAACACAAGTAACAAAGTGTTTCACTTCCTCACAGAAAACACAACCAACAAAAATCACATTCATGGCTTTCTTTTTTTACTGCAACTA TTTTTAGCTTATTCAGCCATAGATCCTGAAACTGAAGAACAACCCTTAAAAGTGTTCAAGTTCTTTACTTTTTGTAACAAGCAACAACAAAAATCACATT CATGGTTTCATTCTTTCACTGCAACTACTTGGAGCTTAACAAGCCACAGATCCAGAAAGTAAAGGACAAATTTTATAGGTGCTCAAGTTTTTTCCTTTTT CTGTTTTTATTCAACCCTTAATGTTTTTAAGTGTTTTTTTATAACAATTTTGAATATCCTGCAGAAAATTGAAAGCTTTTTTCCTAATCAAAATTTGATG TAAGCCTTGTTTTTGTATTTGTAAACCATACTCATTTGTCAAAATTGCATCTTTGAAACAGATTCTAGGTGGGTTTTGAGAATAAAGGTGTTAGCTTTTG AAGAAAACTGTAGTTGGTTTTGTGGGCAGTGATATTTGTTGTTCTTGTTTCTTTTGTTAGATGAAGGCCATGCCCTTGCCTTTTGAGGAATTTCAAGGGA AGGGGGTGTTTGATTTTTGTTCTGGTGGGAACTGAACCCACTTCTGTTCTTGAATCCAGAAGAAGCCCCAATCCTTCTTTATCCTCTTCCACAATGTCCT CTTCTCTTGGCAGTAACAACAACACTGTTGCAGCCACAACCCTCTCAGAGAATCCACCACAAGCATCCTTGGAAACGAGCACTGAAAAATGTGGTATGAG GGTGGAGGATTGGGAGGGTCAAGATCAGTCTATTATGAGGTTAATCATGGGTGATGTTGAAGACCCTTCCGCAGGTTTGAGCAAGCTCTTCCAAACCGGT GGTTTCGGGTCTCAAAATGTTGATTTCAATGGAGGTTTTGGTGTTGTGGACCAAGGGTTGAATATGGTAGGTATTGTTGACCCTTATGTGCAAGGGAATT ACCCTGGCTTCCCATTCCTTGAGAATATAGGTGGTCACAATCCGAAGACTGGTTCTTCGTCTGTCTCGGAATCAATTTCTGTTTCTGCTAACAATCCGTT GTTGGTTTCATCACCCCCTGGTGTGTTTAATTCTCAGCAGCATCAGCCGGTGATTGGTCTAGTAGACGAGAAGCCTCAACTTATCAATCCTCGGTTGCTG TTAAACCAGAATCAAGTTCAGTTCTCAGAGAACCCTTCTTTGTTTGTGCCATTGGCATACTCTCAAATGCAAGAGCAGGAAGGTTTCCCTCAGCATAGAG CGAAACGGCCTTTGTCTGACACTGTTGGTCATGACAATTACCAGGTTCCGAGGTTACCCCGTTTGGACTTTGGGCAAGAGCTACTTGCTAGGGGACAGCA AACACAGCATCCGTTGTTTCCTTATCGGCATCTGCAACAGAAGCTACAATCATTGGTTGTGCCATCTGCGAAACAGGAGAAGGTGAATTCCACTGGAGAT GATGCAAGCAACCAGCTTCAGCAGAGTATATTTGACCAGCTATATAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTACTTGCGCAAGGGATATTGG CGCGGCTCAATCACCAGCTCTCCCCAGTTGGTAAGCCTTTTCAGAGGGCTACTTTTTACATGAAGGAGGCCTTGCAGTTACTGCTCAATTCGAACATTCA CAATTTTTTTGCTTTCTCACCCGTCAGTTTCATATTCAAAATTGGAGCTTACAAGTCATTTTCTGAGATATCACCGGTTCTTCACTTTGTCAACTTCACT TGCAATCAAGCGCTCATCGAAGCTATGGAAAGGTTTGATCGAATTCATGTTATTGATTTTGACATCGGGTTTGGAGAGCAATGGTCATCTTTTATGCAGG AGCTTGCCTTAAGAAATAATGGTGCAACTTCGCTTAAAATTACTGCTATTGTAACTCCCTCCACTTGCGACGATGTTGAGCTCAATTTTATCCGAGAAAA TCTGAACCAATACGCCAAAGAAATTAACATGTCGTTTGAGCTCAATTTTCTGAGCATTGAATCACTGAACTCTTCTTGTCCTCTGGCTGGTCAGTTCTTT GATAATGAGGCAATTGCTGTGAATTTACCACTTTCTTCTTTCACAAATTACCCGTCATTGTTTCCTTCAGTCCTTCGCTTTGTAAAGCAGCTTAGGCCAA AAGTGGTGGTCACTTCGGATAGAAATTGTGACCGAATCGATGTACCATTTTCCACCAATGTAGTCCATGCTCTTCATTGTTACTCAGCCTTGCTTGAGTC ACTCGATGTGGTTAATGTGAGCCCAGATGTCCTCCAAACTATTGAGCGGCATTTCATCCAACCAGCCATTAAGAAAATTGTATTGGGCCACCACCACTCA CCGGAAAAGTTACCTCCTTGGAGGAACCTGTTTCTTCAAACCGGGTTTTCTCCATTCACATTTAGTAACTTCACAGAAGCTCAAGCAGAATGTTTAGTGC AGAAGGCACCGGTGCGGGGATTTCAAGTGGAGAGAAGGAACTCATCTCTTGTGCTATGCTGGCAGCGGAAAGAACTTATCTCAGTTTTGACTTGGCGATG TTGAGCAGCTGCGCTTTAACGTATATTTTTAAAGGTGCTTCTTAACTTGCTACTGTCTTTGTCTTTGTTTATCTTGACAAAAAGCAATCAAACAATTCAT CGAAGAACATTGTCTATGTTTAAATTCATGCATTATTTTACGATATCTTGATTACTCGGTTATGAACGGAAAATTTAGCTTATATTATCGTAATACGTAT CACGTAAACCTTGCGCCATTTCAATTATGCAATATGTGTAGATGCAGGCATTTCACTCTTGGTATCCCGATTCTCACCGGTGGCATTTAGTAACTCTACT GAGTACAAAGCAGACGTGTCCGGGAAGAGGCGGTCTTCTCTTGTTCACTATTTTCTTGTTCTATGCTGGCAAAGGAAGGTTCTCATCTCAGTGAGGCAAA TTGCGCATTTGACTGCTAACTAATTTTAAAATTCGAAGGTGCTTCGTAATTAACTGCTTCTGTTGATCTATAGAATTTGCCTTTGCTATGGTTATATGCT AATTGTCTATGTTTTAGATTCTTTCTATTGAAGTAAACATCTTAATTAGCACCTAAATCCCAATTTATGTGGTTTATCTTCAATGCAGTGTCTTTCAGTT TCAGCAGTTGATTCATGCATTTTTCCTTAATTGTTCTTTAATTACTAGAAACTAACACAAATGACAAATCACTCTGAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24290; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_29000
| Blastp | Scarecrow-like protein 6 from Arabidopsis with 54.82% of identity |
|---|---|
| Blastx | Scarecrow-like protein 6 from Arabidopsis with 54.82% of identity |
| Eggnog | Scarecrow-like protein(ENOG410YANM) |
| Kegg | Link to kegg annotations (AT4G00150) |
| CantataDB | - |
| Mirbase | bdi-MIR171a (MI0011559) |
| Ncbi protein | Link to NCBI protein (XP_019464917.1) |
| Pfam | GRAS domain family (PF03514.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |