Id Trinity | FTRINITY_DN52221_c5_g1_i6 |
---|---|
Name Transcript | Ll_transcript_29010 |
Sequence | CTCAATCCAAAAAAACACAAGTAACAAAGTGTTTCACTTCCTCACAGAAAACACAACCAACAAAAATCACATTCATGGCTTTCTTTTTTTACTGCAACTA TTTTTAGCTTATTCAGCCATAGATCCTGAAACTGAAGAACAACCCTTAAAAGTGTTCAAGTTCTTTACTTTTTGTAACAAGCAACAACAAAAATCACATT CATGGTTTCATTCTTTCACTGCAACTACTTGGAGCTTAACAAGCCACAGATCCAGAAAGTAAAGGACAAATTTTATAGATGAAGGCCATGCCCTTGCCTT TTGAGGAATTTCAAGGGAAGGGGGTGTTTGATTTTTGTTCTGGTGGGAACTGAACCCACTTCTGTTCTTGAATCCAGAAGAAGCCCCAATCCTTCTTTAT CCTCTTCCACAATGTCCTCTTCTCTTGGCAGTAACAACAACACTGTTGCAGCCACAACCCTCTCAGAGAATCCACCACAAGCATCCTTGGAAACGAGCAC TGAAAAATGTGGTATGAGGGTGGAGGATTGGGAGGGTCAAGATCAGTCTATTATGAGGTTAATCATGGGTGATGTTGAAGACCCTTCCGCAGGTTTGAGC AAGCTCTTCCAAACCGGTGGTTTCGGGTCTCAAAATGTTGATTTCAATGGAGGTTTTGGTGTTGTGGACCAAGGGTTGAATATGGTAGGTATTGTTGACC CTTATGTGCAAGGGAATTACCCTGGCTTCCCATTCCTTGAGAATATAGGTGGTCACAATCCGAAGACTGGTTCTTCGTCTGTCTCGGAATCAATTTCTGT TTCTGCTAACAATCCGTTGTTGGTTTCATCACCCCCTGGTGTGTTTAATTCTCAGCAGCATCAGCCGGTGATTGGTCTAGTAGACGAGAAGCCTCAACTT ATCAATCCTCGGTTGCTGTTAAACCAGAATCAAGTTCAGTTCTCAGAGAACCCTTCTTTGTTTGTGCCATTGGCATACTCTCAAATGCAAGAGCAGGAAG GTTTCCCTCAGCATAGAGCGAAACGGCCTTTGTCTGACACTGTTGGTCATGACAATTACCAGGTTCCGAGGTTACCCCGTTTGGACTTTGGGCAAGAGCT ACTTGCTAGGGGACAGCAAACACAGCATCCGTTGTTTCCTTATCGGCATCTGCAACAGAAGCTACAATCATTGGTTGTGCCATCTGCGAAACAGGAGAAG GTGAATTCCACTGGAGATGATGCAAGCAACCAGCTTCAGCAGAGTATATTTGACCAGCTATATAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTAC TTGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAGTTGGTAAGCCTTTTCAGAGGGCTACTTTTTACATGAAGGAGGCCTTGCAGTTACT GCTCAATTCGAACATTCACAATTTTTTTGCTTTCTCACCCGTCAGTTTCATATTCAAAATTGGAGCTTACAAGTCATTTTCTGAGATATCACCGGTTCTT CACTTTGTCAACTTCACTTGCAATCAAGCGCTCATCGAAGCTATGGAAAGGTTTGATCGAATTCATGTTATTGATTTTGACATCGGGTTTGGAGAGCAAT GGTCATCTTTTATGCAGGAGCTTGCCTTAAGAAATAATGGTGCAACTTCGCTTAAAATTACTGCTATTGTAACTCCCTCCACTTGCGACGATGTTGAGCT CAATTTTATCCGAGAAAATCTGAACCAATACGCCAAAGAAATTAACATGTCGTTTGAGCTCAATTTTCTGAGCATTGAATCACTGAACTCTTCTTGTCCT CTGGCTGGTCAGTTCTTTGATAATGAGGCAATTGCTGTGAATTTACCACTTTCTTCTTTCACAAATTACCCGTCATTGTTTCCTTCAGTCCTTCGCTTTG TAAAGCAGCTTAGGCCAAAAGTGGTGGTCACTTCGGATAGAAATTGTGACCGAATCGATGTACCATTTTCCACCAATGTAGTCCATGCTCTTCATTGTTA CTCAGCCTTGCTTGAGTCACTCGATGTGGTTAATGTGAGCCCAGATGTCCTCCAAACTATTGAGCGGCATTTCATCCAACCAGCCATTAAGAAAATTGTA TTGGGCCACCACCACTCACCGGAAAAGTTACCTCCTTGGAGGAACCTGTTTCTTCAAACCGGGTTTTCTCCATTCACATTTAGTAACTTCACAGAAGCTC AAGCAGAATGTTTAGTGCAGAAGGCACCGGTGCGGGGATTTCAAGTGGAGAGAAGGAACTCATCTCTTGTGCTATGCTGGCAGCGGAAAGAACTTATCTC AGTTTTGACTTGGCGATGTTGAGCAGCTGCGCTTTAACGTATATTTTTAAAGGTGCTTCTTAACTTGCTACTGTCTTTGTCTTTGTTTATCTTGACAAAA AGCAATCAAACAATTCATCGAAGAACATTGTCTATGTTTAAATTCATGCATTATTTTACGATATCTTGATTACTCGGTTATGAACGGAAAATTTAGCTTA TATTATCGTAATACGTATCACGTAAACCTTGCGCCATTTCAATTATGCAATATGTGTAGATGCAGGCATTTCACTCTTGGTATCCCGATTCTCACCGGTG GCATTTAGTAACTCTACTGAGTACAAAGCAGACGTGTCCGGGAAGAGGCGGTCTTCTCTTGTTCACTATTTTCTTGTTCTATGCTGGCAAAGGAAGGTTC TCATCTCAGTGAGGCAAATTGCGCATTTGACTGCTAACTAATTTTAAAATTCGAAGGTGCTTCGTAATTAACTGCTTCTGTTGATCTATAGAATTTGCCT TTGCTATGGTTATATGCTAATTGTCTATGTTTTAGATTCTTTCTATTGAAGTAAACATCTTAATTAGCACCTAAATCCCAATTTATGTGGTTTATCTTCA ATGCAGTGTCTTTCAGTTTCAGCAGTTGATTCATGCATTTTTCCTTAATTGTTCTTTAATTACTAGAAACTAACACAAATGACAAATCACTCTGAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_24290; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_29010
Blastp | Scarecrow-like protein 6 from Arabidopsis with 54.82% of identity |
---|---|
Blastx | Scarecrow-like protein 6 from Arabidopsis with 54.82% of identity |
Eggnog | Scarecrow-like protein(ENOG410YANM) |
Kegg | Link to kegg annotations (AT4G00150) |
CantataDB | - |
Mirbase | bdi-MIR171a (MI0011559) |
Ncbi protein | Link to NCBI protein (XP_019464917.1) |
Pfam | GRAS domain family (PF03514.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |