| Id Trinity | FTRINITY_DN52236_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_28641 |
| Sequence | CTCACCAATCCTCACTCACACGAACATAGAGTTTTATAGAAGGCGGCGATGGGTAGCTCATCGGAGGATTTCTCGGTGGTGGTGTTGGCATCGGACCTCG CCGTAGATGCACGGCCCTTTTTGTCACACCAAGAAGAAGAAGAAGAAAACTGGCACGACTGTTCCCAACACCTCTTCCCAGATGAAGATTTCTCCGATCT CGAACTCCTCCAGTTCCTCCGCCTCCAAGGCTGCGACATCAACGGCCACCCCATTCTCCGAATTGTCGGAAAATACTATCCTGGTAGCTACCTCGTACTA ATCCTCAATTTTTTCTTTCTAAAGTTTTAATTTTGAGTTTAAGTTTGCTTGCTATGAGGGATTTTATGAAGTGGGTTTGTAATTGAAATATGAAAAGATG TGATTTTTACTCATTCTGGTACTAATCTTGTGTGGATCTATGCTTTCCTTTCTGTCTTGGCAACTGAGATTTGGATCCAAATCCCTTTTTGTATGTTTCA GTTGAAGTTGTTTGTTATGTATAGTTTGCAGTTTTAAGATCTTAACTACTAAATTTAAGATTTTGTTGTATGTGGGTTTATGTTTAGATCTGAGCTTAAA CAAGGTTGTGACCGAATTTATTAAATTTAAAGTTTTTGGTTAAATGAATTGTTCACAGGAATATTTAGACTATGGAGTTGTGTGATTGTGGAGTTGAAAG TGGGATAGAATAGACCGGATTAGAGTCGCTGCTATAACTATGATTCAACAACACGAAACATTGAAAAGTATTATACTCCCGGACAACAGCAATAACAAAA CTTTGGTCCGCCACATGAATAAACGATGTCATTGTGTTCTGTCATGTATAAACCATGTAATTTGTACTACAGGAATTAGATAAAATAAAGTTTTCCATGA ACTTTTTTCTTGCAAATTCTCCTAGGAGTTTATTATGTCTTGAATTTCTCTCCACTACCTTTCGGTATGTTGCTGTTACTCTGAACAAGTGGTTGGCTCT ATGAAGGGCTTTTCTTATTTTTCTTGTCCAATTGACATACATTCTTTTTAAAAGGTGAATGTGCATGTGATATAAAAACAATTACTGTTTTCTACTGTTT GATTCCTGCTTTTCCAGTTTTGTTAGGAATTTACCTGTCATGTGAAAGCCAATTCTCTACTACTAAGGGAAAGCATTCGTACAAATGTATTTAATCTGTG GATAACATATGATAGATTATTGAGTTAGTTATGCAAACGTTTTGCTAAATACTGGGTTTCTCATGTCTAGATAGCTGTCTGTAGTATAAAACACAATACA ATCAGTTGTTGGTTTCTGATATGCTCATGGAATATTATTCAAAAGCCTCTTTTCATATTTTCCCATCTAGTCCCTGATAATTTCTCTGGATAAAACACTG TCTCAACAGTCCATTATACTGAATCACTAATCATCATCATCTATGTAATCACCCCAATATTGTGCTCTTTATTTTCAATATGAAATGTCTATTGGAATAT TTATTGACATAGATTGAGCTGCACTGATTTACCATGTTGTGACTTTTGAATTTGAGTTCAGGTATCTCGTGTTTGCTTATATAGCAACTATATGCATCGC TCACATCTCTTTTAGACATCAATTAATTTTCTTACCATGACCTGTGTACTCTGTACTTTTCATTTGCATTCATAAATTTGAGTCTCCATGACTAGGTCTG TCCTCTCTTCTCCTCCTCTCACCTCCACTACCACCACGGCACCACCTAATATTGAATAATGTTATTGTTTCTCTAAGTTGCCCATTTAAAGTTCCTATTA ACTAATCATTTCTTAGGTTTTACTTTACAAACTTATTAATGGTCAATGAGGAACGTGAGTAGGCAATTGGAAGTGCTAATAGCCTCACCCCTCATATTCT GTTTTCAGATTTCTATATTCCCCCCTTCATGATTAAGGTGTATTGCCACTCTGCCATGGAAAAATAAAAACAGAGAACAAAACTCAAATCATAAAACAAT ACAATAAAATGAAAGATAGAGAATAAATTTCTATGGCCTTGGCGATAAGTATCTATTTTTCTGAGAAGCTTTTTTGAATATCCTATATTGCTTTGGCACT TAAGTGATGTACTTGCTCTCAAATGGTTTGCAGCAACTGTTGTGAGTGCGGAGCGGCTGAAGCGGTATGTTTCCAACAAAATATGCAGCGAGTTGCCAGA AGCGCCATTCTGCATTGTTTACATGCATACCACTGTTCAAAAGGAGGACAATTCCCCTGGCCTAACCATCTTGAGGTGGATTTATGAAGATCTGCCTTCC GACTTCAAGGATAGGCTTCAAACTGTGTATTTTATCCACCCCGGGCTTCGTTCCAGGCTTGTCATTGCTACTCTTGGTCGATTTTTCTTGAGTGGAGGAT TGTATTGGAAGATCAAGTATATCAACCGCCTTCAGTACCTTTGGGATGATATAAAGAAAGGAGACATCGAGATACCGGAATTTGTGAAAAGTCATGATGA TATTCTGGAGAATAGACCACTCACCGATTATGGCATCGAACCGGACCCCTTTAACTTGACCGGGATGCCTTCAACAACATTCTCATACGGAAGGTACGAA GAGAGATGGGCTGGAAGGGAGTATATCTCTTAGTATGGTTATCTCTTAATCATCTCATGAACTCAAACTTTTGTACATAGTAGCTCTGGTATTGTACTTG TATTCCATATACTGATGTTAGTTCCTCGTTTTGTCAAGTTGAACTTTGGTTTATGGCTCTACATGTCAAGAAAAAACTTAATTATATTAATAAATCTATG GAAGTTTTAAATGTACGTTTTCATATGATGAGTCATTCTTCAAAACTTGTTCCTTGTCCATGTTGATGTACTTATATGAATTGCTCAATAGTTGTGTGCT GTGCAAGATAGATATCTAGTATTAATGCAATGGATTTGGCATAACACTTAATGTGATTTTCTAAGGGTCTGTTTACGAGTTGGGTTTCGGAGGGAAAAGA AGGGAATTAGAGCGAATCCGTTAACGGACCTTTAAAAACAATGTTTCAGGTTCGAGTTTTACGAATGAACAAAATAAGGGTGTGTTTAATTAAGCCGGAG CAATTTCCCTTTACTCCTTCCTAGGTTCTCGATCAATATGAAGCCAGTTTGTCCTTTTGTCAAAGCTGCTCGCCCGGATGATAATACTTGTAAAAGATCC GGTGAAAACTCAGTTAAACATCAGGTAGAGCCTGAGAATAAGCTGAAGAAAGAGGTTAGCAACTCAGCTAGTACTTCGCCAAAGTGCCCTTTTGGATATG ACTCTCAAACATTTAAGATCGGTCCTCTTAGCTGTATGGTATGCCAGGCACTTCTATTTGAGAGTAGCAAATGTGTGCCATGTTCTCATGTTTTCTGCAA AGCATGTATATCACGCTTTAGCGACTGCCCATTATGTGGGGCGGATATTGTGAAGATCGAGCCTGATGCTGAGCTTCAGGGTGTAGTTGATCGCTTTATT GAAGGCCATGCTAGAATCAAAAGGTCTGCCAATTCCGGCAAACAAGAAGAAGAAACAGAAAGTAAACCAGTCATATATGAGGATGTGTCTCTGGAAAGAG GTTCTTTCTTGGTGCAACAGGCCATGAGAGTAAGTATGGACTTTTAAAATATTGTCTTATATCTGAAGGAGTAAATAAAGTAGGATCCTTGAAATTTTTG TCATTAATTATTATCTTCATCAATAACAGTGTTACCTGAAAATGATTTTAATAACTCTTGCTACATTCTAAGCTGGCATGTATTATTGGTTGTACTGCAA AAATCTTTATCCGGAAGTGGCATGTATTATTGGTTGTACTGCAAAAATCTTTATCCGGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24379; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_28641
| Blastp | Protein NCA1 from Arabidopsis with 59.78% of identity |
|---|---|
| Blastx | Protein NCA1 from Arabidopsis with 59.78% of identity |
| Eggnog | RING(ENOG411005M) |
| Kegg | Link to kegg annotations (AT3G54360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437053.1) |
| Pfam | RING-type zinc-finger (PF13445.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |