| Id Trinity | FTRINITY_DN52238_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_29712 |
| Sequence | CTTTTTTTTTTTCTTTCGTTCCGAACACTCAAATCTCTTGAATCTGTGAAAAGCGCATTGCAGTTGAAGAAAATATGGATCCAAAGCTCACAGAAGTTTC TCAAATCTTCAATCGCTTTAAGGCTGCGTTTGTTAGGAACGATTATGATAACTGTTCCAATCTCCTTTCCCAACTCAAGGTGTTACTAACAGGGTTCAGA AGCCTTCCACCTTTGTTTGAGGATACACCTAATGCAGTTCATGAATTAACAATAGCAAGTAACATTCTTCACTCCAATCAGTTACTTGTTTTTTCCCTCT CGTTTTCTTTATTCATTTTTCTGTGATCGTTGCTAAGCTTACTTATTTAAGTAATAGTACCATTCTTTACTTATTAAATTTGATCGATAAATTGATATTG TAAGGGAAAGTTATACACATTAGCTTGGCTGTAAGCTTTGTCATTGAAACTGGAATTTGTCTTCCATGTCTGTGGTCACAATAGGCAGTGGCAACTGGCA AGTACACATGAAACTTAATAACCATGTTTGTTCTTCCAACTATGGTCAGTAAGATAACTTTGCTATGTACTTCATTGTTGATTGTGGTCAAAGTACAAGG TAGACTTTATTTCAATTCATGAAAGATGCTTAATGTGATTTACTTACATATCAGACTACAAAGAGAATAATATAATATTTTTTTAATTTAAACTTGGAAA CTATTAGATGCTTGAAGGTGATGAGAAGACAAGCCATTATAATAATTTTCTTCATGAAGGAATATTTGTAGCTTGAGTAAGATGATATTTCTTAAATGAT GGAACAATGGATCTGCTAGAAGTCCTATTTTTGAGATGTTTTTTCCTGGTGGTTTTCTGAAACTTTCAGGGGAAATATACGAGCATGCTGTTGTCCTTAG CGTGAAAACTGAGGATCAAGATGCTTTTGAGAGAGATTTCTTCCAGCTGAAACCATACTACACAGATGCCAGTAATCGTCTTCCACCATCTCCCCAGGAG TACCCGATACTAGGTCTCAACTTGTTGAGACTGCTTGTGCAGAATAGGATTGCTGAATTCCACACTGAGTTGGAATTGCTTTCACCTACTGCTCTTGAAA ATCCTTGCATTAATCATGCTGTGGAGTTGGAACAATCTTTTATGGAAGGGGCTTACAATCGTGTCTTGAGTGCTCGACAGACAGTGCCACATGATACATA TGTTTATTTCATGGATCTCTTGGCAAAGACAGTCAGAGATGAGATAGCAGGATGCAGTGAGAAGGCTTATGACTATCTTTCACTTAAGGACGCTAAGCAA ATCTTGCTGTACTCCTCAGACCAGGAACTATTGGAGTATATTAAAGAGGAGCATCCTGAGTGGGAGATTAAGAATGGTTCTGTCTTTTTCCAAAAGGCAA AAGAATCTGCTCCTTGCAAAGAAATACCATCTTTGCAACTCATCAACCAGACCCTAAGTTATGCAAGGGAGTTGGAAAGGATTGTCTGAAAAGAAATGCA ATGCAATGCTTCTGTGTTTCCAAAATGTTCAGGTTTCTTGATGTTGGTTACCAGTATTGTATTTTGAAAATTTTATTTTTCCTTATTCAACTTGGAACTC TACCTCTGTGTTACTTTGTGCTGTACTTTTTTCTTTTAATTCTGCTTCGGTAATGGAAAAAAAAATCATTCACACTTAAATTATTTTTCTATGTTGAGGA TTAGATTACTGATGATGCTGGTTTATATTTTGAAATTCACACTCATTGAACTTTTGATAGCTCTGTATTCCTTAATCACTTTATAATGACATTGGGTCTT TTATCTACATACATTATATTGACTATATTTGCAAATGAAACAAAAGAAATAATGAGTTTAATTAAGTTAAAGTGTGGGGAATCTTATTTATGGACTTAGG AATACCCGTAGTGCTCAAACTTTTTTAAAATTAAAGCAAACATAGATTGGATCTATCAATCAATGATTATATTGAATCATACATTGATCATCCCTTTAGA AATTGTTTTAACTTGTAAGTGTCAAATCCAAATTTATCATAATACAATTTATGTTTGTTACTCCGATTCACGTGCATCTTGTAGCTTTGTCCTTTTTTAT CACACACTCTTCCGCACCTTTAGAAGATATTTTATTTTATTTCTTTAATTACATTACAGATAATTTAAAATATTTTATGGGTGGGACCAGAGAAATAAAT GATCCTCGACTATGTACATAAAAATTGCAAATCTACCTAATACACAAATCTTTCTTATGGCTAAATTTAAAACTAGTTCTGTGATAATGAAGTACATCAA CAATCAATTACTGAAATGATTTAATCTTCACCACTTACCAAAGAGACTCTTCTTACCAAACTTCATTTTGCCACCACTTGTTCATAGAAGCATAAATAGA TTCTAGATTTACATGAACAAAGTAAAAAACCAGATTCCTTAGTCCCCATAGATAACAGATCCATATAAACCATAGATTTTCTGTCCCAAAAAGTTCATTT TCTCATGTCTCAGCCCAATGTCATGAAATAATATAAAATATTGATTTACCTTTTTTATAATTATATATTCTGAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24398; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_29712
| Blastp | 26S proteasome non-ATPase regulatory subunit 8 homolog A from Arabidopsis with 83.33% of identity |
|---|---|
| Blastx | 26S proteasome non-ATPase regulatory subunit 8 homolog A from Arabidopsis with 75.2% of identity |
| Eggnog | 26S proteasome nonATPase regulatory subunit(ENOG410XXP2) |
| Kegg | Link to kegg annotations (AT1G64520) |
| CantataDB | Link to cantataDB annotations (CNT0000914) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464492.1) |
| Pfam | CSN8/PSMD8/EIF3K family (PF10075.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |