| Id Trinity | FTRINITY_DN52243_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_29607 |
| Sequence | TGCGTAGGTATTATTACAAATTTAGAATGTAAAAACTTAGCTTAACAATTTTGGTGGGAATAATTGGTTTGTTTAAATAGAAAAAACGAAGGGTGTTATT GGCAATTGAAGGAGTTGGAATCAGTTATGATTGTAGCGAGGATGCAGCAACATAATTTGCCTCAAATCTCTGACTCGTTAACAGCTGCGTGTGGATTTTC AATAAAGCTTGAAACTTTATAAAGGAAATGAACAACTAAAAGCTAAAAACACAGAAACAAATAGTATCACTCAAGTGGGAGTTACAAAACAAAGTATCTG AATAAGAAGGTATGGATATTTTAGACTGTAGAAGGGTTGTCTTTGACAAAATTCATAAATTTGAGCCTGAATATGCTTCAGAGATTATTGGATTACTTCT ATTTCAAGACAATGGTGAGGAAGAAATGGCTATGTTGGCTTCATGCCATGACTATTTCATCCGCAAAGTAGCCTTTAAGGCAAAAATGGTCCTTCAGGGA TTGGCTGCTAAACCTGTCCTATTTCCAATCTCACCTCCCCTCAACAATGAACAAGGTTGGAGCCATTTATCAGCAATCTCTCCAATAACTCCTACTTCGC CACCAAGCTTTCAGGTTCCGTTCCCATATTGGAATCCACATTCTGTGAGCAACACCAATCCAGACACAGTTACGAAGCAGACACGGTTATCCAGTTTGGA GAATTTCATAGAGCCTGTGAATACTGAGACCCGAGGGATCACTCATGATTACTTTGGCTTAGATGCTTCTGCTGCCAATTTCGGTGTAAAGGTTGGTAGA AGGCATTCAAGACTGTCTGAATTTCCAGTCATAACATGTCACTATTTCAAAAAGGGGTTCTGTAAGCATGGAACTAGATGTAGATACTATCATGGTCTAC TTGTCTCAGAGAGCTTCCCTCGGATGCATAGAAATGATGCTATTAATGAACGTCAGATGTTTTTACCTGGGTCACTGGCACAGTTAGAAACAGAAATTGT TGAGCTCTTAAAACCAAGAAGAGGAAGTCCACTGTCAATTGCTTTGTTGCCAATGGCATATCAGGGAAAATATAACAAGGCACTGCAGGCTGATGGTTAC TTAACTGAGAGCCAGAGACACGGCAAGTCTGGATTTAGTTTGACAAAGCTTCTTGCCAGACTGAAAAATAGTATTCAGCTGATAGACGGACCTCATGGAC AGCATGCAGTGGTTCTGGCAGAAGATGTTCCAAAATACATGCAGAATGGAGATTTTGGTCAGAATATTAGTGCAGCGCAACAGATATATTTGACATTTCC AGCTGAAAGCACTTTCACAGAGGATGATGTCTCAAACTATTTCAACACATTTGGGTGGGTTAAAGATGTAAGGATTCCTTGTCAGCAGAGAAGGATGTTT GGATTTGTGACATTTGATGATCCAGAAACTGTTAAGATGATTTTGGAAAAGGGGAATCCCCATTATGTTCATGGGTCTCGGGTGCTTGTCAAACCTTATC GAGAGAAGGCAAGGGTTGTTGACAGGTGAATTCCTTGTCTCTTCCTACCTTTTGGTTTTGTTTTCCAGTTGGAAGTTGATGTAATACTTCACTTAATCCA AGAAAAAATATTCTTAGTTCGTGCTACGACATGGAAGCTTATACCTTTGATTTAAGCTTAAAATGATTGTAACTTGTCATCAATGTTGATCGTGATAATA TATCTTTTTCTTGGTGTCATTTTTATAGTTCTTACTTTTTTCCTGAGAGTATAGAAGCTTAATTAAACCTAAAACTTTTGATTGATGTTATGGTTAGTAT ATAGTTGTTTGTAGTTTCAAAGCTAGTTTCAAAGCTAGTTTCTTCTGTCTCTATTTTTTAAATTACAGAAATTGATAAATGCTAGTATCCTGAATCAGTA TTTCACATGAGATGTTACTAGTTTCTTAAATACCATCTAGCACATTTTCCATATTCACTGTTATGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24421; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_29607
| Blastp | Zinc finger CCCH domain-containing protein 18 from Arabidopsis with 46.83% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 18 from Arabidopsis with 44.49% of identity |
| Eggnog | zinc finger CCCH domain-containing protein(ENOG410YDMG) |
| Kegg | Link to kegg annotations (AT2G05160) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460534.1) |
| Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |