| Id Trinity | FTRINITY_DN52243_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_29597 |
| Sequence | TGCGTAGGTATTATTACAAATTTAGAATGTAAAAACTTAGCTTAACAATTTTGGTGGGAATAATTGGTTTGTTTAAATAGAAAAAACGAAGGGTGTTATT GGCAATTGAAGGAGTTGGAATCAGTTATGATTGTAGCGAGGATGCAGCAACATAATTTGCCTCAAATCTCTGACTCGTTAACAGCTGCGTGTGGATTTTC AATAAAGCTTGAAACTTTATAAAGGAAATGAACAACTAAAAGCTAAAAACACAGAAACAAATAGTATCACTCAAGTGGGAGTTACAAAACAAAGTATCTG AGTGAGTTTACATTACAATAAAAGAGAAACAAAAATCAACAACTGGGTCGTGCTTCTCTCTCTGTATTGAGTTTTTTTCTTCTCCACTTTTATAAAATCA CCAACTATAAGAAGGTATGGATATTTTAGACTGTAGAAGGGTTGTCTTTGACAAAATTCATAAATTTGAGCCTGAATATGCTTCAGAGATTATTGGATTA CTTCTATTTCAAGACAATGGTGAGGAAGAAATGGCTATGTTGGCTTCATGCCATGACTATTTCATCCGCAAAGTAGCCTTTAAGGCAAAAATGGTCCTTC AGGGATTGGCTGCTAAACCTGTCCTATTTCCAATCTCACCTCCCCTCAACAATGAACAAGGTTGGAGCCATTTATCAGCAATCTCTCCAATAACTCCTAC TTCGCCACCAAGCTTTCAGGTTCCGTTCCCATATTGGAATCCACATTCTGTGAGCAACACCAATCCAGACACAGTTACGAAGCAGACACGGTTATCCAGT TTGGAGAATTTCATAGAGCCTGTGAATACTGAGACCCGAGGGATCACTCATGATTACTTTGGCTTAGATGCTTCTGCTGCCAATTTCGGTGTAAAGGTTG GTAGAAGGCATTCAAGACTGTCTGAATTTCCAGTCATAACATGTCACTATTTCAAAAAGGGGTTCTGTAAGCATGGAACTAGATGTAGATACTATCATGG TCTACTTGTCTCAGAGAGCTTCCCTCGGATGCATAGAAATGATGCTATTAATGAACGTCAGATGTTTTTACCTGGGTCACTGGCACAGTTAGAAACAGAA ATTGTTGAGCTCTTAAAACCAAGAAGAGGAAGTCCACTGTCAATTGCTTTGTTGCCAATGGCATATCAGGGAAAATATAACAAGGCACTGCAGGCTGATG GTTACTTAACTGAGAGCCAGAGACACGGCAAGTCTGGATTTAGTTTGACAAAGCTTCTTGCCAGACTGAAAAATAGTATTCAGCTGATAGACGGACCTCA TGGACAGCATGCAGTGGTTCTGGCAGAAGATGTTCCAAAATACATGCAGAATGGAGATTTTGGTCAGAATATTAGTGCAGCGCAACAGATATATTTGACA TTTCCAGCTGAAAGCACTTTCACAGAGGATGATGTCTCAAACTATTTCAACACATTTGGGTGGGTTAAAGATGTAAGGATTCCTTGTCAGCAGAGAAGGA TGTTTGGATTTGTGACATTTGATGATCCAGAAACTGTTAAGATGATTTTGGAAAAGGGGAATCCCCATTATGTTCATGGGTCTCGGGTGCTTGTCAAACC TTATCGAGAGAAGGCAAGGGTTGTTGACAGGAAATTCCGAGATAGATTTGAGAACCATAACTGTTATTCACCACACTATGTAGATTTCCACTCAGAATCT CCCTTGATTTCAAGAAGATACGGAAACCATAGTTCTCTAGTGAGACAGCTGATGGAAGATGATAAGGCCCTGCAGCAGAGGAGATGCCTTGCAGAGCTGG AATTTGCTAAAATTTCTTTGTCTAGTTCACCCCAATTTAGCACCTGCATGGATGGATCAAGGGTTTCAGGTGGTGTGTGATATTATGGATTGCATTGTTT GATATCAAGCTTCAGTATATTTTTCTTGGCAATACACATGGCTCTCTTATTGATTATTGAGTAAAATACATACTAGGATCTATAGTCAGAATGGTTAGGG AGAGATAACAAATCTGCTACAAATTAGAGAAAAAAAATGAAGGATCAAAACAAGAGATACAAAACAGCCTAGCTAACAACATCTGAAACAGTTGACACAA ATTTTATTGTAACCAATAAATCTTCCTAACAACATGTTATGCAGATGACCTTAATTTCAAGCCTGCAGAATCTTTCAGCTCTGCGCTGAATGAAAAACCT AATCAGATAGAGTCCGATTCCTCTGATGAGAACAGGTATGCATCAATGTTGATTGATTTCTCTGATAGGTTATAAACCTTGCATTTGTTATATACATTCT ACCCATTCTGATATATTCTTTATACCTTGGTCAGACCTCCATAAACAGTTATTCCTTCGTCTTATCTACCAAATTGATCTGCAAAACTTACCCCCCTTGT GATTTTGGCAATAATCTGACCCCATTCTTCCTGTCAGGAAATATTGGAAATTTCCTTAATTACTTCTGCCTTTTTTGACATTTAGAATGGATGATATTAT TTGTTTCCAAACATGCAGTATGGCTGCTATACTTTTCCGTCACAATTCGAAGCTAACTGTGGATATTATTAAATTTAATTTAATTTTATGCAGCAGTCAA GAACTCGATCTCCCGGACAGTCCATTTGCATTTCCAATAGAAAGTGGTATTGAAGCAGTCATGTAGTTTCAGAAAATCATACAGGAAAAGTATAGAGTTA AGGTGAAAGGCAGCAACTTTATTTTAATACATAGCCATTCTATTGTTCCATTTTCGCAACTAGCTCGGCAGTTTAGTCAATGTCTCCAGCAAGTGGATGA AAATAACTTCCCTCTTCACAACTTGAATTGGAGGAATTAACATACTTTCAGTGATATATGTAAGAAGGTTATAGATTTCCATTATAGCGTGATGGAAAAA GCTTTGGTTTTTATAAGATTATGTAGTTAGGAGCTTTATGAAGTCCTTAGTGGATGAAAATAACATGTTATATGTTCTCATGTACTTGTGGGGTTGTTCT CAAATTAAAACACAATGTGTGTTATTTTTAGTTACCTTATCCTCCTCTGAGATTCTTACAATTGAGGACTAAGACATAATACACATTATGTTTTGCTTGA AAAACAACATTGCAAGTAACAATGGAACTTTATCGTTATGTCAAATCAGTATCCAGTTGTCATTAGATTGCAGAACCTTTTTTAGAATCTATGGATGAAC TGATTTAAGTACTATGAACAACTTCAATAATGTTCTTTTTTTGTTGTTTGTGAAAATTATGTTTTCATTTTTATTCATTAACTGCTTTTGGATGCCTAAG TAGATGTCAGTAATGCCTTAAGTTCTCCAGGGACAGTAATCTGAATGTCTTAGTTTCTTATACTCTTATTGATATCTAGGCCAAAATAGTAATTGTATTA TTTATTTTTTTGATTTGACTTGATTGTTATTTTGTTATCAGTTTCTTGCAAGAGATCTTTGGCAGATAAACTGTATGCAGTATGCATGATAAGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24421; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_29597
| Blastp | Zinc finger CCCH domain-containing protein 18 from Arabidopsis with 46.83% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 18 from Arabidopsis with 46.83% of identity |
| Eggnog | zinc finger CCCH domain-containing protein(ENOG410YDMG) |
| Kegg | Link to kegg annotations (AT2G05160) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460539.1) |
| Pfam | OST-HTH/LOTUS domain (PF12872.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |