| Id Trinity | FTRINITY_DN52247_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_29767 |
| Sequence | GGGAGAGATTGGAAATTGGTTGAAAGAACAATGAAAGTGGGCGAAGGAATAAGAGTGGTGGTGGCCGGAGACAGAGGCAGCGGAAAATCAAGTCTGATTT GTGCAATCGCATCAGAGTCATTCCCTGATCTTGTTCCTCATCTCCTTCCTCCCACTCACTTGCCTCCTCATCTCTTCCCTCATCATCTTCCTCTTACCGT CATTGACACCTCTTCCGTATTGGAAAAACAAGCCAAGCGTAACGAAGAATTGAAGCGAGCCGATGTGGTCATTTTAACATATGCTTGCAACGATCCATCA TCCTTTACGCGCTTGCCTTCTTATTGGCTTCCCGAATTACACAACTTGGAGGTGAAGGCACCTGTAATCGTGGTTGGTTGCAAGTTAGACCTAAGGGATG AAAACCACCAAGTGAGCTTAGAGACTCAAATGTCTCACCTCTTACAACACTGCAAGTATGTTGCCACGTGTATTGAATGCTCAGCATATACCTTATACCA GGTCCCTGAAGTCTTTTATTTTGCTCAAAAAGCGGTGCTGCATCCCTTAGATGCATTGTTTGATCATGAAACCCAAGCTTTAACTGATCAATGTGTGAGG GCATTGAGAAGAATATTTGTTCTTTGCGATCGCAACATGGATGATGCCCTTGATGATACAGAACTCAATGAATTTCAGGTTAGATGCTTCAGTGCACCAT TGCAGTCATCTGACATAGCAGGGGTCAAAGCTATTGTTCAGCATAAAGTACCTGAAGGACTCAACTCTCATGGTCTTACTTTTCCAGGATTTATTTATAT CCATAAGATGTTTCTAAAGAAAGGGCGTCCAGAGACACTATGGGCTGTACTAAGAAACTTTGGATATGATAATGATCTAAAACTCCAGGATGATTTCCTT CCAATTCCATCTAAGATTGCCCCTGATCAGGTCATATACTTAGTACTTTGTTCTACTCTTGTCTTCCTGTTTCTTTAAACAGAAGAGGTTGGACTAGTAA CCATTTAACTCTACAAATTGCAATATTGGTATTAATAATAACAGAAAATGTATTGTTAAATTAGGAAGAGTAAACTGTCAGCTACAGGTTTCTTAAGCCC TAGATACATGTAAATTCTAATATTCGCTATTCGCTGCTGCATTTCTTTTTATGGCTTGTGATTTCCTAAAACGGAACATTGCAAATACTAGGTATAAATA TTTCAATCTTTACAAATAATGTGAATTTGGTTGCACTTTCTGTTTAACTTTGAAATGATATGTTTTTAATTTCTTTGGAATCATGTTAAAGAGTGTGGAG CTGACCAGCGAAGCTGTAGAGTTTCTGAACGGTGTCTTCCGACTGTTAGATATGGACAAAGATCGAGCCCTTCGACCCGCTGAAGTTGATAAGCTATTTT GTACTGCTCCACAAAGTCCGTGGAATGATGCTCCATATAAGGATGCAGCTGAGAGAACTGACATAGGTTACATGTCTCTTAACGGATTTCTATCCCTGTG GGCTCTTATGACATTAATTGATCCACGACGTAGCCTAGCTAATTTGATTTACATAGGATATAGTGGTAATCCTGCTGCAGCACTCCGTGTTACTCGTAGA AGATCCGTAGATCGCAGAAAGCAAGCAACCGAAAGGAATGTGTTCCAATGCTATGTTTTTGGTTCTAAAAATTCCGGGAAATCTGCTATTTTGGAATCAT TGTTGGGAAGGCCTTTCTCAAATAATTATACTCCAACAACGGTTGAGCAGTTTGCAGCAAATTCCATAGAATTACTAGGGGGAACTAGGAAAACTCTTGT ATTGCGGGAGATACCAGAGGGTGCAGTATCGAAAGTTTTGTCAAATCAGGATTATTTGGCAGCATGTGATGTAGCTGTTTTTGTGTATGACAGCTCAGAT GAACATTCATGGAAGAAATCCAGAGGTTTGCTTGATAAGGTTGCTAGACAAGGAGAACAAACTGGTTATAAAGTTCCTTGTCTCCTTATCGCTGCTAAGG ATGATTTAACTCCCTACCCAAGGGCAGTACAAGATTCAGTCAAGGTTACTCAGGAACTGGGAATAGAGGCACCTATTCACCTAAGTATGAAATTAGGGGA TTCAAGTAACGTGTACAATAAGATTGTTAGTGCTGCAGAACACCCTCATTTAAGCATCCCAGAAACTGAGATTGGGAGGAAAAGAAAGCAATACCAACAA CTTCTTCAAAATTCTCTTATTTTTGCCTCAGTTGGGACGGTTGTGGCAGTTGTTGGTGTAGCAGCAATGCGTGCATATGCGGTGAAGAAAAATTCTTCTG CTTAGTCTCACAGCAAGGACATGCTAACCAAGATGGAAACCTAAGTTAGAATACGTGATGTATAGTATAGTAAAATAGTGACTTCATTTATTTTGGTGCG AAGATCCTAAATATGATGCCAGTTTTTGTTTTCTTCCAGCAAAAAATATTTTTTTGGCGTGGATGTTATATTTTATTAAGGGTCACTTATCATCTGATCA TGCCTTAATTGAATTACAATGATCATTTTTTATTTATGGTCTCATTTCTTTAGAATGAATATTGTATTTTATTTTATATTTAAATCAGGAGGTGAGGTTT ATGTATTGAGTTTTTCTCTGAGAGGAAGAAAACACAAATATCAGCTAAAGGAACTTTAAGAATGCAAATGGAATAGGATCATGATAACCTATTTTGTCAA CTCTTTTGTTGATACATTGCATCAATAACAAAATGATTATAATTATACTGGTGTATAAAAAGAAAATGAAGCCTTGTGTGAAGCCTTTTGATTTCCATTG GAGATATATTGATGTCAGTCCCAAAAGACCATTTGATTCAAGATGTTATATAATGTGATATTGTGATCATGATGTGTAACATATCTTCTAATTTGATTTA AAATTAAAGTAGATGTAGGAATATGCTATATTATTATTATGATTGTATATTTCCTTATAAATGTTGTAGTGCATTTTGTTTCTTCAAGCTTTAACCCCTA AAAAAGCAAAGTAGATTGTAAAACATTCATTAATTATCCATGTTACACACGTGTACCTGTTGTCTGTCCAGTGTCCCATAAAGTTTATGTCTTTTGGTTC TCTTCATTCCATTCACTCACTCTTCCTTCCTCTTTGACTCTTTGTTTCTCCTACACAGAACAAAAGAAGAAGAAAAGGAAATGGGTAGAAAACCATATGC TGTTAAGATCAACAATGACAAAGTTCCCATGCTGGAAAAACCTTCTGTGGAGCCTTCCATTGGAAATCCTCCAGTTGAAAGCCTACACAATAAGATTCCT TCCCAGCTGACACATCTGAATTCCTCAGCCAATGGAGTGGTCACACTTCATGAATCAAATTCAGCACTGAAGCAAGTAAAGGGAAAAAAAGAGCTGCAAA AGAAACCTGCTTCTGCTACATTGAAAAGGTACTTGTCCAAAGTCCATGGTTCATCCGTGAGGCGTTCGGAACGCATTAAGAGTGCAGTTATTCCTCCCTC TAATTTCAACCATGAAATCGAACATATCAAGGATTTAACTGCTAGTGAAAGTCAGAAAGATGCTTATGAGGTTGAGTCTGAATACATAGAGAATTTAAAT GGAAAAAGTTTGGAAGAAAAAGTTGCTTATGCCTTGCAAAAAATTGAAGCTCTGGATAAGAGTTTAAAATTGTTGAAATTCAAGGTTGATGAAGATGTTG GCTTATATGAAGCCCCATCTGTGGCTTCGATTAGTTTCCGTAGCATGTACATCGACTCGCAGAGGAAGCTTGAAGCTTTAGCAGAAGAAAATCTACAATT AACCGGAAAGCTGCAAAGTTGTCTTGGAAAAATTGATGTGGTATGTTTAAATAATGCTTGCAACATAATGTTACCGATGATGAAGTCCTGCAGAACTTTG AGTGTTATTTTTATAAAATGAAACTTTAGTCATTATGGTAGCCTTCCTTGCTTGTAGTTTTTTTTCCTTCTGTACCTCTGCCCTTTCATTGGTTATTAAT GTTGTTAATATTATCTATATTTTATAAGAAGAAATGATGTTCATATAGTAGTAAGTGTTTGGAAGAACCTGTGTTTAGACAATTTACGATGCACGATACC ATGATGAACTTTTTTAAAATCTGGATGTTTCTTTCATTTATTAAAAGCTTATAGTTATTTAGGATCAGGAGACCTGAAGCATATACATTTTTTTATTTAA TGAATTCAGCTTTTAGTTAAGTTGACATGAGCCTGACTATATAACCTCGATTACTCGTTACAATGTAGTATGAGAAGGAGAATCATGTTTTGATTCAAGT ATTGGACAAACTGAAGGAGGCAGTTAATGCTGTTGCGATTTCAACCCAAGCAATGGAGAAAACTGGTTCAGCTTCTGCAGCTAAAAGAAAGAGGAGTCTT GCTAATAACATTTTGGGGAGATGATGCTATTGCTGTTATTTTGTCTATGAATACTGAAGTATTATTAGAATAGACTTTTAGCACCTAATCTGCAATGGTC TTTAACTCTGATCTGAACTTGTGTGTCTAATACTTCCTGTTGCTTACTTTGAACTTTTATTATGGTAATGCAAACTTGCAAGGTTTTATGTCTCCTGTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24448; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_29767
| Blastp | Mitochondrial Rho GTPase 2 from Arabidopsis with 61.01% of identity |
|---|---|
| Blastx | Mitochondrial Rho GTPase 2 from Arabidopsis with 61.54% of identity |
| Eggnog | Mitochondrial GTPase involved in mitochondrial trafficking (By similarity)(ENOG410XRHW) |
| Kegg | Link to kegg annotations (AT3G63150) |
| CantataDB | Link to cantataDB annotations (CNT0002300) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456243.1) |
| Pfam | EF hand associated (PF08355.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |