Ll_transcript_29646

• Id Trinity: FTRINITY_DN52248_c0_g4_i1
• Name Transcript: Ll_transcript_29646
• Sequence: TGCAACGAAGTACCGAGAAAGTAGGAAAGTGCGCTGAGAAGACAGACCAGAGAAATGGAATGCAATAAGGATGAGGCCGTCAGAGCTAAAGAAATTGCTG AGAGGAAGTTTATTGCGAAAGATACTTTGGGTGCAAAGAAGTTTGCATTGAAGGCCCAAAATTTATTTCCTGCTCTTGAGGGTATTCCTCAAATGTTAGC AACACTTGATGTGCATATTTCTGCTGAGAATAAAATAAATGGAGAAGTAGATCGGTATAGTATCCTTGGTGTAGACCCCCTTGCTGATGAGGATACAGTC AGAAAACATTACAGGAAGCTAGCTCTCACGCTTCACCCCGATAAGAACAAGTCCGTTGGAGCTGACGGGGCTTTTAAACTTATTTCAGAGGCATGGAGTT TACTATCAGATAAATCTAAAAGGGCAGCATATGATGAGAAGAGAAATGCAAAAGCTAGGAAAGTTTCAACTAAGTTTGCAGGTTCATCAGCCCAAACAGG TGTTAATGGAAGTTACAATTTTACTAAGACTGCCTCTTCAAGTGCAAAGACTCAGATGAGTAATGCTAAAGATGCTCAGAAGAGTGCTGCTAAAGAATCT CAGAAGAATAACGCTAAAGAATCTCAGAAGAATAATGCTAAAGAACACACTTCATCTTCTACCAATAAATCTAAATCAAATACATTCTGGACTGTTTGCC ATCGCTGCAAAATGCAGTATGAGTATCTTAGAATCTATCTTAATCTTAAACTCTTGTGTCCCAATTGCCATGAACCATTTTATGCTGTAGAAACTGCTCC CCCACCTTCAAGTTTTATTCGACCGCCTTCAACTTCGTGGACCTTTTCACAGCATCAGGAAAATTCTAGTCGCCAAGTGCCTAACAAGATGAAGTCTAAT GCCGGAAAGAAGGCAGCTTCAAATGTTGGAGCTGGGGGTTACTGTAAAACTGACTCTAATAACCCTACCAATTTCCAGTGGACTCCATTTTCAAAAACTT CTGGTGTCTCTAATGTTGCTCGAGCTGCTACAGTTGTTCAGCAGGCCTATAATAAAGTGAAGCGAGAACGTGTGGAAGCACAGGCAGCTATGAAAGGGGA AGATGCCTTGAGAAGAAAGCAGCATGTTCCGAAAAAAAGTTACTTCAATCCTGCTAAGAGAAGAAAGGGGTGCACGGATGATGCTACTGTGAGTAACAAT GCTACGGAACATGTAAATAGTGTGGGATTTCCTTGGGATCTTCTAATGATGAAAGCTAGGAAAGAAATCATGAAGAAACTTAGCGACGTCCAGTCAAATA CTGTTGATAAAGCTGCCATGAAAGAGAATGGAGATAACTTGCAGAAAACAAATGAGGAAGGAGAGAAGTCTGTAAGAAATTCTGAAACATGTGCTCAAAA TAACACTGGGAAGGCAGAGGATAGAAAGAGTGGATGTGAAGGCATCGAGACGATTGGAGTTACTACTATCGCCAAAATTGGCACAAAAGTTTTGGAGACA ATACCGATTGATGTCCCTGATTCTGAGTTCCATGATTTTAACAAGGTTCGAACTGAAAAATCTTTTGAAGAAAATCAAGTATGGGCTGCATATGATGACA ATGATGGGATGCCTCGAAATTATGCATTGATCCACAATGTGATCTCTCTGGATCCATTCAAGGTGCGTATCAGGTGGCTCAGCTCAAAGACCAACGGTGA ACTGGGCCCCATAAATTGGGTTGTTTCAGGCTTTTTAAAAACATGTGGGGATTTCAGAATTGGTAAACTTGAAATCTGTGACTCCATCAATTGTTTTTCT CACAAGGTTAGGTGGGGAAAAGGCAACGATGGAGCCATTTGTATATATCCCAGGAAAGGGGATGTTTGGGCCCTCTATAGGAATTGGTCACTTTTTTGGA ATGAGCTAACAGCAGATGAGGATATACACAAGTTTGATATGGTTGAAGTACTTGAGGGTTTTACTGAAGAGCAGGGTGTAATTGTTATTCCTATGATCAA AGTGGCAGGGTTCAGGACAGTATTTCGTCACCACTTAGATCCGAGTGAAATCAGGATCATTCCAAGGGAAGAGATGTTTCGGTTCTCTCACCGGGTTCCC TCACACTCACTTACTGGTCAAGATGCTCCAAATGCTCTAAAGGGCTGCATGGTGCTGGACCCAGCTGCTACTCCATCTGAACTTCTTCAGTTGATACAAA CTGTAAAAGGGGAAGACATGATGGACATCGAGGACACTGTTATAAAAGAAACAAGTGATGACATGAAAGAATCCGGTGACATGGATAAGGAAGGGGAAGA AAAGGAGGGCAATAATAAAGATATCCAAGAAATAGAAACTTTGTAAGAGAAGAAGATTTGTGAAAACTTGTAGTATTGACCATGTGCAGCACTCTTAATG AAATCAACTTGAGGACTTTTTGGCTCGTTTAAGAAATGGAAAATGCAGTAACACTCTTAAGCATACTGCAGAAAGATTTCATTTCTGTTCTGACATTGCA GTTAATTACTTCTCCAATGGTTGAAGTTAAATGGTTCAGCTCCAGATCATACCAAACAAAGCTAAGTATGGAATGATGAAGTTGTGCCATCTGCAGATTG TTCTTCTCGGTTAAAATGAGAACTTGTCTGAGATAGACCTTTTTAGGTTCTTACTCAATTTTGTTCTGTAAATCGGATTTAGTGTCATGTTCATATATTT GTAAGATTTTTAGCTACCATTAGTGATTAATAACATTGCTTTACAAATTGATTCCAGTTTCTTAAATGGTGTTTGTTTGAGTCATCTTTATATGATCAGT AGGTTAGATCATTCTGAATGAACAGAGAGATTCCTCACTTCTTC
• Tissue: flowers
• Gene name: LI_gene_24457;
• Additional information: details;

Expression of Ll_transcript_29646

FPKM

• FPAB: 3.6
• FPNAB: 4.6
• LF1: 3.1
• LF2: 3.5
• LF3: 4.1
• LF4: 3.3
• UF1: 2.8
• UF2: 2.8
• UF3: 3.2
• UF4: 2.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_29646

• Blastp: Chaperone protein DnaJ from Staphylococcus with 53.97% of identity
• Blastx: Chaperone protein DnaJ from Staphylococcus with 53.97% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (SE1266)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413745.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;