Id Trinity | FTRINITY_DN52254_c2_g6_i3 |
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Name Transcript | Ll_transcript_29516 |
Sequence | TTCCCTAGCCCCTTTTCATCAATGGACTCCTGACGTATACGAAGGATCTCCCACTCCAGTCGTTGCTTTTCTTTCTGTTACTTCGAAAGTAGCTGCTTTA GCTTTAGCCACTCGAATTTTCGATATTCCTTTTTATTTCTCATCAAACGAATGGCATCTTCTTCTGGAAATCCTAGCTATTTTTAGCATGATATTGGGAA ATCTCATTGCTATTACCCAAACAAGCATGAAACGTATGCTTGCATATTCGTCCATAGGTCAAATCGGATATGTCATTATTGGAATAATTGTTGGAGACTC AAATGGTGGATATGCAAGCATGATAACTTATATGCTGTTCTATATCTCCATGAATCTAGGAACTTTTGCTTGCATTGTATTATTTGGTCTACGTACCGGA ACTGATAACATTCGAGATTATGCAGGATTATACACGAAAGATCCCTTTTTGGCTCTCTCTTTAGCCCTATGTCTCTTATCCTTAGGAGGTCTTCCTCCAC TAGCAGGTTTTTTCGGAAAACTTCATTTATTCTGGTGTGGATGGCAGGCAGGCCTATATTTCTTGGTTTCAATAGGACTCCTTACGAGCGTTGTTTCTAT CTACTATTATCTAAAAATAATCAAGTTATTAATGACTGGACGAAACCAAGAAATAACTCCTCACGTGCGAAATTATAGAAGGTCCCCTTTAAGATCAAAC AATTCCATCGAATTGAGTATGATTGTATGTGTGATAGCATCTACTATACTGGGAATATCAATGAACCCGATTATTGAAATTGCTCAGGATACCCTTTTTT AGCTTCTAGAATCTATTTCTTAGTTCAAGATCCCTCTTATCTTACTAACTGGAATCAAAGAATTAGTAGATCTGTTCCGCCCAAAATGGGAATGGGCTAG GGTTATGAACTTATAATCTATAATCTGATGATCGAGTCGATTCCATGATTATAAGTTCATTCCATACGGACCAGATCGGAATAGGGTTATATACATTCTC CTTATGCGAAGGGGTCATTCGAGCGTATCTAAATAGATACTATGCTTACATCGAAAAGTGCTCT BLAST |
Tissue | flowers |
Gene name | LI_gene_24495; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_29516
Blastp | NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic from Gossypium with 96.62% of identity |
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Blastx | NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic from Nicotiana with 97.74% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0002482) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (YP_009027315.1) |
Pfam | Proton-conducting membrane transporter (PF00361.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |