| Id Trinity | FTRINITY_DN52260_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_29828 |
| Sequence | CTATAATTTATTCTGCAATATACTTGTTGATAAGAGATATTTTGTTTAGCATAACATTAAGGTCCAAGTTCTCATACCAAAAATCCACAAAACCAAATTC CTTGCTCACCACCACTTTCTATACCCTTTATCCAAAAACCATGTCCAGTTTCACTCATGCTACAGCACTATTCCATGCTCACATCAAATCCAAACACAAA ACCACTTCCACCACCAACAACAATAACAATCCTTTGCCCCTTAACCAACCACCCTTTTCAGCTGAACTACAGAATAATAATGTGACCAACAGAAGGAAGT TGATGTCAACATTTGTAGCCACTTCAGTGGCAGTGTTGGGAGTGCAGGGTACCCCACTAGCACTAGCCCAGAACTGGGGCACTAGGTCCTTCCTAAGGGA ACATTTCTTTGAGCCAGGGTTGTCCCCTGAAGATGCAGTGGCAAGGATAAAACAAACCGCTGAGGGGTTACATAGTATTAGGGACATGTTGGAAACCATG TCTTGGAGGTATGTCATGTTTTATATACGGTTAAAGCAGGCTTATCTTGACCAAGATTTGAAAAATGCTCTTAGCACTTTGCCAGAAAATCGGCGTAAGG AGTATGTTAAAACTGCTAATGAATTGGTGGACAACATGGCTGAGGTATTCTTAAATGTCAATGAATCACTAAATGTTTTGTTTTTTTGTGTAGTTTAATG CTTTCACGATTGATACTAATATATGTTTATCTTATTACATGTCATACTATGTTATAATATATCAGCCTAACACATCAAAGAGATATTTTTCAATGAACTT GTGGAAGAATCACCAAAACCAAACCATTTGGCCAATACTATATGTGAACTCTGAACCAAAAGTTATTAAGCTATGGATCTTTACAATATAATTTGAGTAT CACACGAAACTTCTTATTTACAAACATGAGACTCATAAAATATAAAAAAATGAGCTTTCTTTACGGAGCTAGATTGTACTTAACTTAATTCCCACCATAA ACACCCAGATAGATGTTAATCAGTACTCAACTTTTTCTTCCTTGAGTAATCATGATACATAAATTGATGTTGTGATTTATTGTTTTTTCAGTTTGATCGG TATGTTCGATCGCCAAAGGTCTATGAATCGTACCTATACTACGAGAAGACATTGAAATCAATAGATGAACTTGTTGCTATGTTAGCATAGCACAAGAAGG AAGCTGCAGAGTATTGGTGTTTGCAATTCTACTTTTTGTGTATAAAACGTCTTGAACATATAAGGTAGAATCATAAAATTCATTGTGAAAGCCATGAATG CCATAACATCATTAGAAGTTTGTAGCAGCTGTAAAACATTGATTACACTCAAATTATAAAACTATAACATTTCAAATTGCATATATTGAATCCTCCAACA CAAGCCTATAGATCAAGAGACTATCGAGAAAACACACTTTAATACCAAATACACACTAGGAAATTTTCATGAAACAACCTTTTTCAAACCACACTGTGAT GAGGAGAAAGGCACAAACACTTGGGAACACATCAATTTCAAGAGATTGCAACGGCTAATAGGAGGATCAGTATCATGAACAGAAAAACAGCAATCAAAGC CAATCAGCGAGCCCGAAATACGCTCACTTTAACTTCTTTAGATAATTTACTAGTTAAAATGTTAGCTCATTTAAACAAACTGCCCTAGTTTATAGCTCAA GTCTTGTATAATTCATAAGTTTAGCTTATCCAGCATTATAACTAAAGAATGGTGAAGCTGAACTAAGTTTTCAGCATTACAGGCTTGGTTGGTTTTGGGT GTTGGCTTGTGTTAGTTTGGCCTAAGCCCTCTTTTAGAATTGCATCTACCTTCTCTTGTATTAGAAAATTGCAGTTTAAGTAATTCTGAACTATTCTGCT GTGTATACAATTTTTACCAGTATGAGGTAGAAGAAAAGTGGCATGCTTTGGCTATTAGTAATTCTTCATACCAAAGACACAAAATTGAAGCACAATAACT ATCATGTAACTATCTTCTCTCCTTTACTAAGTGCATCAAGGTAAGGATAGCTGTTGTACTTGGAGAAAATACACTTTCAATATTACAGAACCTTAAAATT TG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24513; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_29828
| Blastp | Photosynthetic NDH subunit of lumenal location 2, chloroplastic from Arabidopsis with 58.87% of identity |
|---|---|
| Blastx | Photosynthetic NDH subunit of lumenal location 2, chloroplastic from Arabidopsis with 61.07% of identity |
| Eggnog | enhancer protein(ENOG410YK3K) |
| Kegg | Link to kegg annotations (AT1G14150) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459581.1) |
| Pfam | Oxygen evolving enhancer protein 3 (PsbQ) (PF05757.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |