Ll_transcript_29182

• Id Trinity: FTRINITY_DN52289_c3_g1_i4
• Name Transcript: Ll_transcript_29182
• Sequence: CTGATATGAAAAGAAATGTGTTTTTTTTTAGTATATCCATTGAAGTGTTGCATGTGTAATGAATCATCTGTAATTATCTCTGTGTGAAATGTCTGTGAAT CCTATTGAATTTCTTACTAAATCATGTATTAACGGTTTCTTTTATAGTTTCTGACTATGGTTACTTGATTCTTGTGAATATTGACAGGTTAATTGTAGAT TTTGATTTAGTCATCCGGTGAAGTTTTCGTTTCGAAATATATAGGGCAATGAGCTTTGTTTTCAGAGGACAAAGAGCTGATATAGAAAATGGATTTCCAG GATTTGTGCCTGAGAGGCGTGCATTGCGTGTTCATGCTGCACGTCCGAGTAATTCTAATTCACTTACTTTTCTTGTCACAGTTCTCCTTTTATTCATGAT AATGAACTCCCAGCAGTTTTCACCGAACTTTCTGCTCTGGCTGGTGCTTGGTGCTTTCCTAATCGCTACATTGTTAAGGATGTATGCAACATGCCAACAG CTACAAGCTCGGGCCCAAGCTCATGCGGCAGCAGCATCTGATATTCTCAGCCACACGGAACTACGGCTGCATATGCCATCATCAATAGAACTTGCAACTC GAGGGCGTCTGCAAGGCCTCAGACTTCAACTTGCACTTATCGATCGGGAGTTTGATGATCTAGGTTTTTTATTTATATTCTTGTTCACTTGCTACTAGAC GTTCATGGAACCTTTTCAAAACCAACTCTGCTATACTTAATTTACACATTTGTTTCAGATGTGCTAAGTAATATATTCATGTGGAGTGTCCTCCCTTCAT TTCAGATTATGAAACATTAAGAGCTCTGGATTCAGATAATGTTCATACCACACCTGCTATGACTGACGAAGAGATAAATGCTCTTCCTGTCCATAAATAC AAGGGTTATGGTCCGCAGAATAGTTCGGCAATGCAACATGCTTCATCTTCCACTCCTGCTGAGGTATCAACCACATCTTTGGTATTTTTAAATTTGGCCT AAACAAAGTTACATTGCATATCAAGACAATTTCACTTGTTCCTAGAGCATGTAGTATTTCTACTTGATTTTTAACTGGTTTTCTTACGCAATTATGGATG GGTGCTGACACTCCTCAACCTGCTTCATATATGATAATTTATTATATATATACATATATCACATTTATCACGATCTAATACTTTGGAAATTATAAATGCT ATTAGACGGATATTCTTTTTTTAATATAATTTTATCATTGGCATCCACCAGTGTGTGTATTCATCCCAATTTGTTCGAACCACCCTCAGCATATTTTTCA TCAGCCTATATGACATGATCTGCTCTCTCGAACATAATTCTTGTTTCATCTCTATTTTGATTTTAATCGGGGTTCATGGCAAAAGCTTCAACCACTAATG TACATATGGCACTTCTCCTTGCTATCACTGGAAAATATTTCATTTTATGAGCTCCTTAGCATAAGGTGACAGGTTGACATTATCTATTGCTTCTTCCTGT TTGTGGCAGAAGAGGGAAGATACTTCTAATGCAGGTGGGAGCGTAAAAGCTTCCGATGATGGCCTGACTTGCAGTGTATGTTTGGAGCAAGTTAATGTTG GAGACACACTTCGTAGCTTACCTTGTTTGCATCAGGTTCATCCCGTAGCTTTAACTTGTATTTGTTTAGCAAGTAGTTTGTTTCCTATCTGTCGAATAAT ATGTTGTGATTCTATCAGTCCATATATGCAAAATATCATCTTAGTCACCACTCTATATATTGTCTTATTGGTAGTTTCCTTCTCCTTAGCCATTAGATGG TTCAGCTCTATATGATTTTAGTTTAAGGTGGTGTCTAAACATTTACTGTTCCAAAAATTCCACATTTCTCTTCAGCTATTGATTTGATACAATAAAATTG CAAAGCATAAATGAATAACAAAATTAGTAAATTTAAAAATATTGTGAAACTCAGTTTCATATGCTAGTTTTTTGTTCAACATTTTTCTGGATTCTTCTTA GTGAGCTGTGCCATTTGCTTCGTGTTACAGTGCATTTAGATATACGTTATATATGTGTGGGCCAATTTTGTGACAAATGTTATTTTACAATTATATTAAG GAATGAAGTAATCCTAAAGATTTAGCAGCATAATGTTATTTATTTATCTCAAATGTGACACTAAGACCTTGTTTTGTCTTTCTAAGTTTCATGCTAATTG CATTGAT
• Tissue: flowers
• Gene name: LI_gene_24653;
• Additional information: details;

Expression of Ll_transcript_29182

FPKM

• FPAB: 0.1
• FPNAB: 0.1
• LF1: 0
• LF2: 0
• LF3: 0.2
• LF4: 0.1
• UF1: 0.1
• UF2: 0.2
• UF3: 0.1
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_29182

• Blastp: E3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 79.43% of identity
• Blastx: E3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 80% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT3G55530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432996.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;