Id Trinity | FTRINITY_DN52294_c11_g1_i4 |
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Name Transcript | Ll_transcript_29300 |
Sequence | ATAAAGAGGCCATTTTTGCAAATGAGGGATTACAAAAATAAAATAAAATAACTGAACTTTGACTGAAAAAAATCAGCTTTTTAAGGTCTGAACAATTGTT GGCTTGCAATCGAACTGACAAAGAGTTTGTACCTTAGCCTACGCCTTTATCTGAATCATCAATTAAGAAAAAAACATTTTCCCATTTTCCCTCCGCCACT GTACTAAGTACTGTTCCACTGGCCCCTCAATTGAACATGTTTCATTGTTGACTCAGTGGTTCAGAACAACATAGATAAGTCACCATGTTCTTCTTGCACA ATTCCAGTTTCTGTTCCATTCCTCCCTCTAATATTCCTTTTATTTTCAACAATTCACTGAAACAAAGGAACTTATTTCTTCATCAACAACCTTTCCCTTC TCTTTTTCATAGAAAGCCCAAAGCTTCCACCTTCAAAATTTTCTCTGCTGGTTTCTTTGATGGCATCGCTGAAATTGCTCATAATAAGGTTCTGATTGCA GCTACTGCTTCTATGTTGATTGGGCAAATTTCTAAGCCTTTCACTTCTGTGTTTCTGTATGGCAAAGAGTTTGATGTCAAGACTTTTTTTCAGGCTGGAG GGTTTCCATCATCACACTCCTCTGCAACAGTGGCTGCTGCAACGTTCCTTGGCCTTGAGAGAGGATTCTCAGATCCCATTTTTGGTCTTACAGTTGTGTA TGCTGGTCTAATTATGTATGATGCCCAGGTATGATATTCTTATGTCAAATATGGTAGTCTTTTTTCCTCTCCCCTTTATGCATTATATATCTTTCAATTA TAAAAAAAACTAACATTTGATATTCTTATGTATCTTTTCAAAAAACCATTCATTACAGATAATTAAATCTTTTGTAATTGTGTCTCTTATTAATTATGGT TAAGTATAGGTATTGATCTCTATATTTAAGGTTTGGCTCATTTAGCAACTTTTAATTGCTATCAAGTTTTTGTTTTTTCATTATTTGCTGTTTTTCATGT CCTGTTTACTTGTATGCATGCTGCAAGAATCCAAACCTGCTTGCTAGTCACACCTTCCTTTGTTCAATGTTTTCCCTATAATTTGCTTATATCTTGTGAA GCATTATAAATTGGTGTTGTATATAGTCTCTCCTAAGTCCGGATAAAAGATGAAGGTTGTGTTAGACAATCGAAAACTGTGCTGAATCTCAATGATATTG ATTAACGTTGTGATAATGTTAAGTCGGCAAGCATGATTTATGATAGAGCATTATTAGTTATGATATCATTCAGTCCATACAGCCGACCTACTTAA BLAST |
Tissue | flowers |
Gene name | LI_gene_24666; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_29300
Blastp | Uncharacterized membrane protein YuiD from Bacillus with 31.4% of identity |
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Blastx | - |
Eggnog | Acid phosphatase vanadium-dependent haloperoxidase related(COG1963) |
Kegg | Link to kegg annotations (BSU32060) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431248.1) |
Pfam | Divergent PAP2 family (PF02681.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |