Ll_transcript_231849

Id TrinityFTRINITY_DN52316_c2_g1_i1
Name TranscriptLl_transcript_231849
SequenceGATTCAATGGACACGTGGGTAGGACTTCAAATTATTTGATCCCTCTACCTCCCTATATGTACTACATCCTTAAACTTAGTTGAAACTTGAAAGTACACAA AGAGTTTGGGATCAAAAAAAAGGAGAGTCTTTTCAACATGAGAACTAGTTGTTGCCTCAACCTTCCACCTCCAACTTCAAACATCCTCATAAAACCACCC CATGTTTCATTGGTGAAAAACGAAGGATATTGGAGGAGGCAATGTATTATGATTGGAGTGGCATCATATTGCACCATAATTGGAATAGAAGTTAAGAACA ATTTAGTGGATAATCATGAAGGTACAAATTTAACTTATGATGAGGTTGTATCAAAAAATAGTTCCTCATCACTAGTTTATGTTAGTGGTTCTAAATGGAG CCAGAAAAGTGCATGCCCTTCATGGAGAGGCAACTCCTTCCAAACCATCGTGCCGGAGAATCTTCCACGGCCAGCCGCCCGGCGGAGATATGAGCTTGTT GGTTCCACCAACAAGGATGCACCACCACTCTCACTTCAACAATCTATCAAACATAGAAACACCAAGGGTAGTTGTTTCTCCATGTGAAATCAAATTAACT ATAAATTATTATATACTCATATACCTCAAAATGTAATGATATATCTTTGGTAGTATAAAAAAAATCTTTTTTGTTTCATAGGTGATGTAGTTAGTACATG TAAAGTAGTTATCTGATTTGTTCTCAACGTGCACCCTTTAAATGCATTAGTAAAGAAGTGCTATGTTGCTAATACACATAAGTGCACCCTGGCTTAGATA AGGAGTGTTAGGATTGTTGTGCAGCACATGATTGAGAACAAACAATCGAATAAAAGAAAAAGAATAAAGAAGAAGAGACAAAAAAAATTATTTGTTAATG AGTTTTGATCAATTTGTAAATACGTTGCCGAAAGCGTAGAGTGACTACCAATATATCGTTAGAGATTAGGATTACAAGCTCCTATAGATGCTCTTGCTGT ATTCTGGTATACACAATACATGTACATATAGCCCTATACTCGGACCTTATACATAACTCAGAAAGCTCATAAAACAGTTTCTAGATTCTATATGTAGAAT GCCGATCCACAGCCAGCCCATGCTCATAAAACAGTTTCTAGATTCTATGAGTTTTAATGCGCGAGACGTGGGCCCCTCTGGAAGATAGTCTCCTAAGATT TTGGAGTCAGCAAGGTGGTAGTCCTCACCACGTTCTTGTCGTGTTTCGTTTTACACGTATGAGCTATGCATAACAATCTCCACTTTGGCAGATATCCTGC TACTTAGGAATTATACACAACAACTTTCACCTTAGTGAATATTCTACTCTCTTTACTAGCTCCTCAATGGGACTTTCTCCACATGAGAGCATGCTTCCCT TTAGTGTTCAATTATTTTTTACTTTGTCATGGAGAAGCCAACCTAAGCCACCTGGCCATGAGCTCTTCCTTTACAAGGTAACGAGCCATTGTCGTACTCT TCTCCGAACTTGTAGTGCACCTTCTCCAAATATGTACCATCATCCAATTGAATAAGCTTCCTAGCTATCTGTTGCTAGAAGACTTTTGACATAATAGATC ATCTACGAGAGTGTACTAACAACTGCTCTCTTTAATACTCAACATAACTAAACCATGGAGTTTTATTGGAAACCCTCAACGACTGTCACCATTCTCTGTA CTAACAATCATATTTAAAAAAAACTCAAATTCCACGCTAAGGATTATACCCACCTCACCTTGCGTCAATGTCAATCAATGTCCGTGCTGCAACTTGCATC TGTGCCAATCCCTATGTTACACTTCACATATATATTAATGTCCATGTCACACCTTGCATCTATGCCAATATTTGTGTGTTATTTTTTTCCATGATGCTAC AAAAACACCATAAGAATTCACCACTTCTCATCTTAGAGCCTGATGCTCCACTTGGTTCCGTTCTAGCTCCATGTGCCTATTGAGACAGTCCCTTTTATAA TGCCTGATCTATTTGATCCTAAAGCACTATGTTTTTTGTCCACCATTGGATTTTGACTGTTTCCCCTTTGTAGAATCATCTCCGTCTCCTTTCCTTCCAC ACCTTTGACCTCCTTTCACATACAGACTGTCACTCCAAGTCCTTTCCGTTGCATTATGTTTCCTTTGACATTGAGGCATTAGTGCAACCATGATCTCATC CTGTTTGGTAGAGTATTCATGTGGGTACGGGTTGCCACCAATTGTTTGTAGGAACTAGGCAAGGAGCACAAAAAATTATTGCTTCATCTTTGTCACCAAC TTTCACGTCAAACTTGTGTAAATCTGCAATTATTTGATTGAAAGTGTTGATATGCTGTATCAAATTAGAACCATCATGCATCTTCATGCATATGGTTCTA GTAACCTTTTCCTTCAACTCATCCCACTCTAGTTGATCTATGTCTGCTAGTTTATTCTCTTGCAATGCCTTCAAAATACCTTGCTAAACCAACACATCTT TAATCCTCATTTGTTCTCAATACGAAATTACCAGTTCCATCGAACTTCTCCGACAAATTTTGAGCTGAGGTTAAGAGTCATTTTATACCAGTTACTCTGA TACTAATTGTTGTGCAACAAAACTGTTGGGAACAAGCAATTGAATAAACATGGAGAATAAAGAAGAGACAAAACACAAGGATTTTTTAACAAGGTTCAAC CAATTGTCCCTATGTCCCTGGGAGCATTGAGCGGCTATAAATATATCATTATAGATTAGGATTACAAGCTCTTACTCAACTAAGATATACAAAATACATG TATATATAGCTTTCTATCCGGACAATTGTATAACCCTAAATGCCCCTAAAGCAGCTTTTAGATTCTATTTGTTGATTGTCGATCCACTACCTTGCTGGAC ATCATGACCAACCCCTGGATCACTGCGTATCCATGCGTGTGCCAATCCATGGCCATGCTGGCCAAGATGGCCAGCCTGTGGATCTCTGTGTATCCATTCG TGTGCCAATCACGACTGTGGTGTCCAACACGCTCAAGCTGTGGGTCCCTCTGCAAGATAGCCTCTTGGGGTTCTGGGACCAATACAACCATGGTCCTCAT AACCATCTCGCCATGCTTCCTTCTACACTTATGAGCCATGCACACAACAAGGATTTTTTGATAGCAACCTAAGCTGGCTACTGGTATAACTGTGCCTTGT GATCCATTCTTTGTTTATTTCTTTTTGGGGTTTTGTTCTGTTAGTTTTTAATTAAGAGGATTTTCTTAATCAGTCGTCCTTTTGCAGGGCCAGGCAGATG TTGTTTTCAAGTCACCAGAAGATAATTCAACTCTGAATCTTAACGACGTTCAAGGACTTGTGACTTGGGTGCTTGGTGAAGGATTTATGCCATCATGGGT TTTTATCAAGAATAAACCTCTTATTCCCAAAGTGGTTATGCTCTATATGCCAGGCCTGGATGCAGCTTTGTTCTTGTCGCAGTCTAAAAGGTTTCCCAAT TTAAAAAAATTCTGTCGCAAACCAAGGCCACTTCTAGCTCTTAGCCGTATATCAGATAGTATGCAGACAGTGGATGCACTTCTAACATGCAAGCTGAAAA GAAAGAGGGACCAACATAGTTCAATTATACCAAAATCTACTCTGATAAGTCAACAAGAAAAAGGCTGTAGTGATACAGATGGTGTATCATTTACGGAGCT TGTGAAAGACATACCATTTCCCGTTACATACTATACACTAACAGAGAAACAACTGGAAGAGAATGGATACTCTGTTAATCAGCCAGGTTTTATTTCTACT ATGCCTGCTCCTCCGGGATCATTTTGTGAGATGTTGGCGCTTGATTGTGAGATGTGCATAACAAGCGAGGGTTTCGAACTGACAAGAGTTACTCTAGTGG ATGTCCAAGGACAGGTTTTGATAGATAAATTGGTTAAACCATCAAATGCTATTACTGATTACAATACCAGATTTAGTGGAATAACGTATGAGATGTTAGA TGGGGTGACGACAAGTCTGAGAGACATTCAGGAAGAGTTTCTAAAGCTGGTTTACAAAGAGACTATCCTTGTTGGGCATTCTTTGGAAAATGACTTATTA GCATTGAAGATATCACATGATTTGGTCATTGACACAGCAGTATTATACAAACACCCACGAGGAGCATCTCATAAAACTGCTCTACGGGTTCTGACTAAGA GATTTCTTTCAAGGGAGATACAACAATCAGAGAAAGGACATGACAGCATTGAAGATGCTAAAGCTACCATGGAATTGGCACTATTGAAGATCCGGAATGG GCCTGACTTTGGTTCCCCTCCATCCTTTATGAGGAAAAAACTCCTTTCCATTTTGAGCGAGTCTGGCAAAACCTCCTCTTTGATTGACAATATATCTGTT GTAAAACGATATGCCTCTGAGTCGTCTCATTCAATTCCGGTGACCTCTGATGATGATGCACTTGCAAAGACCAACAAGGAGGTGAAGAATGATAAGGTAC ATTTTATCTGGACTCAGTTTTCTGAGTTACAGTCATACTTAAAGAAACAAGCTGAAGATTCAGAGATCTTGAATAAAAGACTCGCAGAGATGATGGCATT ACTTACATGCCAGAAAGATTTGACAAAAGGTAAAGACTTGAAGTTGAGTGCATCTTCCGAACTGAAGCAAATTTTGGGTCGCATGGATGCTAGAATTCAT AAACTGTACATGGCATTGCCGACTAATGCCATGTTGATAATTTGCACTGGTCATGGAGACACAGCCGTTGTCCACAGGCTTAGGAGAATGCTTGCTGAGG AGGGTGAAAGTAATTTTTGTAGAGAACAGATTGTTGAAATCTTGGAAGAGCTTCAAGCTCGAGCTGAAGTAGCCTTATGTTTTGTAGGTGTAAAACATTG AGTGTTATCATAATACAAAAATGGATTGAAATTATTCTTGATAACCTTATGTCTTGAGGTAAGGTTCTTCAATATTTAACAATGATTATGCTTATGCTTC TTTGAATATTTATATTATTTTTTCTGGTAGCCTTTTTCATTTGTCATGACATTTTCTTCCTTTTGGATATCATCAATGAAGTTGCACAAACTTTAACATA GTTGAAACTTGAAATGTTACAGGGCTTGAGAATTTGCT BLAST
Tissueflowers
Gene nameLI_gene_24792; 
Additional informationdetails; 

Expression of Ll_transcript_231849

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_231849
BlastpSmall RNA degrading nuclease 5 from Arabidopsis with 65.02% of identity
BlastxSmall RNA degrading nuclease 5 from Arabidopsis with 65.19% of identity
EggnogDNA polymerase iii(COG0847)
KeggLink to kegg annotations (AT5G25800)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019442933.1)
PfamExonuclease (PF00929.23)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;