| Id Trinity | FTRINITY_DN52316_c2_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_231870 |
| Sequence | GATTCAATGGACACGTGGGTAGGACTTCAAATTATTTGATCCCTCTACCTCCCTATATGTACTACATCCTTAAACTTAGTTGAAACTTGAAAGTACACAA AGAGTTTGGGATCAAAAAAAAGGAGAGTCTTTTCAACATGAGAACTAGTTGTTGCCTCAACCTTCCACCTCCAACTTCAAACATCCTCATAAAACCACCC CATGTTTCATTGTAAGTACTAAAGTGTATATTTTTGGTCGTGTAACATATCATGTGCCTCATGTCACTTATATATATGTTAATTCAATCATCTTGCACAC TAGTATCATCACTACCATACTTATTTAATGCACAATTTCTTTGTTGTAAAAGGGTGAAAAACGAAGGATATTGGAGGAGGCAATGTATTATGATTGGAGT GGCATCATATTGCACCATAATTGGAATAGAAGTTAAGAACAATTTAGTGGATAATCATGAAGGTACAAATTTAACTTATGATGAGGTTGTATCAAAAAAT AGTTCCTCATCACTAGTTTATGTTAGTGGTTCTAAATGGAGCCAGAAAAGTGCATGCCCTTCATGGAGAGGCAACTCCTTCCAAACCATCGTGCCGGAGA ATCTTCCACGGCCAGCCGCCCGGCGGAGATATGAGCTTGTTGGTTCCACCAACAAGGATGCACCACCACTCTCACTTCAACAATCTATCAAACATAGAAA CACCAAGGGTAGTTGTTTCTCCATGTGAAATCAAATTAACTATAAATTATTATATACTCATATACCTCAAAATGTAATGATATATCTTTGGTAGTATAAA AAAAATCTTTTTTGTTTCATAGGTGATGTAGTTAGTACATGTAAAGTAGTTATCTGATTTGTTCTCAACGTGCACCCTTTAAATGCATTAGTAAAGAAGT GCTATGTTGCTAATACACATAAGTGCACCCTGGCTTAGATAAGGAGTGTTAGGATTGTTGTGCAGCACATGATTGAGAACAAACAATCGAATAAAAGAAA AAGAATAAAGAAGAAGAGACAAAAAAAATTATTTGTTAATGAGTTTTGATCAATTTGTAAATACGTTGCCGAAAGCGTAGAGTGACTACCAATATATCGT TAGAGATTAGGATTACAAGCTCCTATAGATGCTCTTGCTGTATTCTGGTATACACAATACATGTACATATAGCCCTATACTCGGACCTTATACATAACTC AGAAAGCTCATAAAACAGTTTCTAGATTCTATATGTAGAATGCCGATCCACAGCCAGCCCATGCTCATAAAACAGTTTCTAGATTCTATGAGTTTTAATG CGCGAGACGTGGGCCCCTCTGGAAGATAGTCTCCTAAGATTTTGGAGTCAGCAAGGTGGTAGTCCTCACCACGTTCTTGTCGTGTTTCGTTTTACACGTA TGAGCTATGCATAACAATCTCCACTTTGGCAGATATCCTGCTACTTAGGAATTATACACAACAACTTTCACCTTAGTGAATATTCTACTCTCTTTACTAG CTCCTCAATGGGACTTTCTCCACATGAGAGCATGCTTCCCTTTAGTGTTCAATTATTTTTTACTTTGTCATGGAGAAGCCAACCTAAGCCACCTGGCCAT GAGCTCTTCCTTTACAAGGTAACGAGCCATTGTCGTACTCTTCTCCGAACTTGTAGTGCACCTTCTCCAAATATGTACCATCATCCAATTGAATAAGCTT CCTAGCTATCTGTTGCTAGAAGACTTTTGACATAATAGATCATCTACGAGAGTGTACTAACAACTGCTCTCTTTAATACTCAACATAACTAAACCATGGA GTTTTATTGGAAACCCTCAACGACTGTCACCATTCTCTGTACTAACAATCATATTTAAAAAAAACTCAAATTCCACGCTAAGGATTATACCCACCTCACC TTGCGTCAATGTCAATCAATGTCCGTGCTGCAACTTGCATCTGTGCCAATCCCTATGTTACACTTCACATATATATTAATGTCCATGTCACACCTTGCAT CTATGCCAATATTTGTGTGTTATTTTTTTCCATGATGCTACAAAAACACCATAAGAATTCACCACTTCTCATCTTAGAGCCTGATGCTCCACTTGGTTCC GTTCTAGCTCCATGTGCCTATTGAGACAGTCCCTTTTATAATGCCTGATCTATTTGATCCTAAAGCACTATGTTTTTTGTCCACCATTGGATTTTGACTG TTTCCCCTTTGTAGAATCATCTCCGTCTCCTTTCCTTCCACACCTTTGACCTCCTTTCACATACAGACTGTCACTCCAAGTCCTTTCCGTTGCATTATGT TTCCTTTGACATTGAGGCATTAGTGCAACCATGATCTCATCCTGTTTGGTAGAGTATTCATGTGGGTACGGGTTGCCACCAATTGTTTGTAGGAACTAGG CAAGGAGCACAAAAAATTATTGCTTCATCTTTGTCACCAACTTTCACGTCAAACTTGTGTAAATCTGCAATTATTTGATTGAAAGTGTTGATATGCTGTA TCAAATTAGAACCATCATGCATCTTCATGCATATGGTTCTAGTAACCTTTTCCTTCAACTCATCCCACTCTAGTTGATCTATGTCTGCTAGTTTATTCTC TTGCAATGCCTTCAAAATACCTTGCTAAACCAACACATCTTTAATCCTCATTTGTTCTCAATACGAAATTACCAGTTCCATCGAACTTCTCCGACAAATT TTGAGCTGAGGTTAAGAGTCATTTTATACCAGTTACTCTGATACTAATTGTTGTGCAACAAAACTGTTGGGAACAAGCAATTGAATAAACATGGAGAATA AAGAAGAGACAAAACACAAGGATTTTTTAACAAGGTTCAACCAATTGTCCCTATGTCCCTGGGAGCATTGAGCGGCTATAAATATATCATTATAGATTAG GATTACAAGCTCTTACTCAACTAAGATATACAAAATACATGTATATATAGCTTTCTATCCGGACAATTGTATAACCCTAAATGCCCCTAAAGCAGCTTTT AGATTCTATTTGTTGATTGTCGATCCACTACCTTGCTGGACATCATGACCAACCCCTGGATCACTGCGTATCCATGCGTGTGCCAATCCATGGCCATGCT GGCCAAGATGGCCAGCCTGTGGATCTCTGTGTATCCATTCGTGTGCCAATCACGACTGTGGTGTCCAACACGCTCAAGCTGTGGGTCCCTCTGCAAGATA GCCTCTTGGGGTTCTGGGACCAATACAACCATGGTCCTCATAACCATCTCGCCATGCTTCCTTCTACACTTATGAGCCATGCACACAACAAGGATTTTTT GATAGCAACCTAAGCTGGCTACTGGTATAACTGTGCCTTGTGATCCATTCTTTGTTTATTTCTTTTTGGGGTTTTGTTCTGTTAGTTTTTAATTAAGAGG ATTTTCTTAATCAGTCGTCCTTTTGCAGGGCCAGGCAGATGTTGTTTTCAAGTCACCAGAAGATAATTCAACTCTGAATCTTAACGACGTTCAAGGACTT GTGACTTGGGTGCTTGGTGAAGGATTTATGCCATCATGGGTTTTTATCAAGAATAAACCTCTTATTCCCAAAGTGGTTATGCTCTATATGCCAGGCCTGG ATGCAGCTTTGTTCTTGTCGCAGTCTAAAAGGTTTCCCAATTTAAAAAAATTCTGTCGCAAACCAAGGCCACTTCTAGCTCTTAGCCGTATATCAGATAG TATGCAGACAGTGGATGCACTTCTAACATGCAAGCTGAAAAGAAAGAGGGACCAACATAGTTCAATTATACCAAAATCTACTCTGATAAGTCAACAAGAA AAAGGCTGTAGTGATACAGATGGTGTATCATTTACGGAGCTTGTGAAAGACATACCATTTCCCGTTACATACTATACACTAACAGAGAAACAACTGGAAG AGAATGGATACTCTGTTAATCAGCCAGGTTTTATTTCTACTATGCCTGCTCCTCCGGGATCATTTTGTGAGATGTTGGCGCTTGATTGTGAGATGTGCAT AACAAGCGAGGGTTTCGAACTGACAAGAGTTACTCTAGTGGATGTCCAAGGACAGGTTTTGATAGATAAATTGGTTAAACCATCAAATGCTATTACTGAT TACAATACCAGATTTAGTGGAATAACGTATGAGATGTTAGATGGGGTGACGACAAGTCTGAGAGACATTCAGGAAGAGTTTCTAAAGCTGGTTTACAAAG AGACTATCCTTGTTGGGCATTCTTTGGAAAATGACTTATTAGCATTGAAGATATCACATGATTTGGTCATTGACACAGCAGTATTATACAAACACCCACG AGGAGCATCTCATAAAACTGCTCTACGGGTTCTGACTAAGAGATTTCTTTCAAGGGAGATACAACAATCAGAGAAAGGACATGACAGCATTGAAGATGCT AAAGCTACCATGGAATTGGCACTATTGAAGATCCGGAATGGGCCTGACTTTGGTTCCCCTCCATCCTTTATGAGGAAAAAACTCCTTTCCATTTTGAGCG AGTCTGGCAAAACCTCCTCTTTGATTGACAATATATCTGTTGTAAAACGATATGCCTCTGAGTCGTCTCATTCAATTCCGGTGACCTCTGATGATGATGC ACTTGCAAAGACCAACAAGGAGGTGAAGAATGATAAGGTACATTTTATCTGGACTCAGTTTTCTGAGTTACAGTCATACTTAAAGAAACAAGCTGAAGAT TCAGAGATCTTGAATAAAAGACTCGCAGAGATGATGGCATTACTTACATGCCAGAAAGATTTGACAAAAGGTAAAGACTTGAAGTTGAGTGCATCTTCCG AACTGAAGCAAATTTTGGGTCGCATGGATGCTAGAATTCATAAACTGTACATGGCATTGCCGACTAATGCCATGTTGATAATTTGCACTGGTCATGGAGA CACAGCCGTTGTCCACAGGCTTAGGAGAATGCTTGCTGAGGAGGGTGAAAGTAATTTTTGTAGAGAACAGATTGTTGAAATCTTGGAAGAGCTTCAAGCT CGAGCTGAAGTAGCCTTATGTTTTGTAGGTGTAAAACATTGAGTGTTATCATAATACAAAAATGGATTGAAATTATTCTTGATAACCTTATGTCTTGAGG TAAGGTTCTTCAATATTTAACAATGATTATGCTTATGCTTCTTTGAATATTTATATTATTTTTTCTGGTAGCCTTTTTCATTTGTCATGACATTTTCTTC CTTTTGGATATCATCAATGAAGTTGCACAAACTTTAACATAGTTGAAACTTGAAATGTTACAGGGCTTGAGAATTTGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24792; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_231870
| Blastp | Small RNA degrading nuclease 5 from Arabidopsis with 65.02% of identity |
|---|---|
| Blastx | Small RNA degrading nuclease 5 from Arabidopsis with 65.19% of identity |
| Eggnog | DNA polymerase iii(COG0847) |
| Kegg | Link to kegg annotations (AT5G25800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442933.1) |
| Pfam | Exonuclease (PF00929.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |