Ll_transcript_231872

Id TrinityFTRINITY_DN52316_c2_g1_i12
Name TranscriptLl_transcript_231872
SequenceGATTCAATGGACACGTGGGTAGGACTTCAAATTATTTGATCCCTCTACCTCCCTATATGTACTACATCCTTAAACTTAGTTGAAACTTGAAAGTACACAA AGAGTTTGGGATCAAAAAAAAGGAGAGTCTTTTCAACATGAGAACTAGTTGTTGCCTCAACCTTCCACCTCCAACTTCAAACATCCTCATAAAACCACCC CATGTTTCATTGGTGAAAAACGAAGGATATTGGAGGAGGCAATGTATTATGATTGGAGTGGCATCATATTGCACCATAATTGGAATAGAAGTTAAGAACA ATTTAGTGGATAATCATGAAGGTACAAATTTAACTTATGATGAGGTTGTATCAAAAAATAGTTCCTCATCACTAGTTTATGTTAGTGGTTCTAAATGGAG CCAGAAAAGTGCATGCCCTTCATGGAGAGGCAACTCCTTCCAAACCATCGTGCCGGAGAATCTTCCACGGCCAGCCGCCCGGCGGAGATATGAGCTTGTT GGTTCCACCAACAAGGATGCACCACCACTCTCACTTCAACAATCTATCAAACATAGAAACACCAAGGGTAGTTGTTTCTCCATGTGAAATCAAATTAACT ATAAATTATTATATACTCATATACCTCAAAATGTAATGATATATCTTTGGTAGTATAAAAAAAATCTTTTTTGTTTCATAGGTGATGTAGTTAGTACATG TAAAGTAGTTATCTGATTTGTTCTCAACGTGCACCCTTTAAATGCATTAGTAAAGAAGTGCTATGTTGCTAATACACATAAGTGCACCCTGGCTTAGATA AGGAGTGTTAGGATTGTTGTGCAGCACATGATTGAGAACAAACAATCGAATAAAAGAAAAAGAATAAAGAAGAAGAGACAAAAAAAAATTATTTGTTAAT GAGTTTTGATCAATTTGTAAATACGTTGCCGAAAGCGTAGAGTGACTACCAATATATCGTTAGAGATTAGGATTACAAGCTCCTATAGATGCTCTTGCTG TATTCTGGTATACACAATACATGTACATATAGCCCTATACTCGGACCTTATACATAACTCAGAAAGCTCATAAAACAGTTTCTAGATTCTATATGTAGAA TGCCGATCCACAGCCAGCCCATGCTCATAAAACAGTTTCTAGATTCTATGAGTTTTAATGCGCGAGACGTGGGCCCCTCTGGAAGATAGTCTCCTAAGAT TTTGGAGTCAGCAAGGTGGTAGTCCTCACCACGTTCTTGTCGTGTTTCGTTTTACACGTATGAGCTATGCATAACAATCTCCACTTTGGCAGATATCCTG CTACTTAGGAATTATACACAACAACTTTCACCTTAGTGAATATTCTACTCTCTTTACTAGCTCCTCAATGGGACTTTCTCCACATGAGAGCATGCTTCCC TTTAGTGTTCAATTATTTTTTACTTTGTCATGGAGAAGCCAACCTAAGCCACCTGGCCATGAGCTCTTCCTTTACAAGGTAACGAGCCATTGTCGTACTC TTCTCCGAACTTGTAGTGCACCTTCTCCAAATATGTACCATCATCCAATTGAATAAGCTTCCTAGCTATCTGTTGCTAGAAGACTTTTGACATAATAGAT CATCTACGAGAGTGTACTAACAACTGCTCTCTTTAATACTCAACATAACTAAACCATGGAGTTTTATTGGAAACCCTCAACGACTGTCACCATTCTCTGT ACTAACAATCATATTTAAAAAAAACTCAAATTCCACGCTAAGGATTATACCCACCTCACCTTGCGTCAATGTCAATCAATGTCCGTGCTGCAACTTGCAT CTGTGCCAATCCCTATGTTACACTTCACATATATATTAATGTCCATGTCACACCTTGCATCTATGCCAATATTTGTGTGTTATTTTTTTCCATGATGCTA CAAAAACACCATAAGAATTCACCACTTCTCATCTTAGAGCCTGATGCTCCACTTGGTTCCGTTCTAGCTCCATGTGCCTATTGAGACAGTCCCTTTTATA ATGCCTGATCTATTTGATCCTAAAGCACTATGTTTTTTGTCCACCATTGGATTTTGACTGTTTCCCCTTTGTAGAATCATCTCCGTCTCCTTTCCTTCCA CACCTTTGACCTCCTTTCACATACAGACTGTCACTCCAAGTCCTTTCCGTTGCATTATGTTTCCTTTGACATTGAGGCATTAGTGCAACCATGATCTCAT CCTGTTTGGTAGAGTATTCATGTGGGTACGGGTTGCCACCAATTGTTTGTAGGAACTAGGCAAGGAGCACAAAAAATTATTGCTTCATCTTTGTCACCAA CTTTCACGTCAAACTTGTGTAAATCTGCAATTATTTGATTGAAAGTGTTGATATGCTGTATCAAATTAGAACCATCATGCATCTTCATGCATATGGTTCT AGTAACCTTTTCCTTCAACTCATCCCACTCTAGTTGATCTATGTCTGCTAGTTTATTCTCTTGCAATGCCTTCAAAATACCTTGCTAAACCAACACATCT TTAATCCTCATTTGTTCTCAATACGAAATTACCAGTTCCATCGAACTTCTCCGACAAATTTTGAGCTGAGGTTAAGAGTCATTTTATACCAGTTACTCTG ATACTAATTGTTGTGCAACAAAACTGTTGGGAACAAGCAATTGAATAAACATGGAGAATAAAGAAGAGACAAAACACAAGGATTTTTTAACAAGGTTCAA CCAATTGTCCCTATGTCCCTGGGAGCATTGAGCGGCTATAAATATATCATTATAGATTAGGATTACAAGCTCTTACTCAACTAAGATATACAAAATACAT GTATATATAGCTTTCTATCCGGACAATTGTATAACCCTAAATGCCCCTAAAGCAGCTTTTAGATTCTATTTGTTGATTGTCGATCCACTACCTTGCTGGA CATCATGACCAACCCCTGGATCACTGCGTATCCATGCGTGTGCCAATCCATGGCCATGCTGGCCAAGATGGCCAGCCTGTGGATCTCTGTGTATCCATTC GTGTGCCAATCACGACTGTGGTGTCCAACACGCTCAAGCTGTGGGTCCCTCTGCAAGATAGCCTCTTGGGGTTCTGGGACCAATACAACCATGGTCCTCA TAACCATCTCGCCATGCTTCCTTCTACACTTATGAGCCATGCACACAACAAGGATTTTTTGATAGCAACCTAAGCTGGCTACTGGGCCAGGCAGATGTTG TTTTCAAGTCACCAGAAGATAATTCAACTCTGAATCTTAACGACGTTCAAGGACTTGTGACTTGGGTGCTTGGTGAAGGATTTATGCCATCATGGGTTTT TATCAAGAATAAACCTCTTATTCCCAAAGTGGTTATGCTCTATATGCCAGGCCTGGATGCAGCTTTGTTCTTGTCGCAGTCTAAAAGGTTTCCCAATTTA AAAAAATTCTGTCGCAAACCAAGGCCACTTCTAGCTCTTAGCCGTATATCAGATAGTATGCAGACAGTGGATGCACTTCTAACATGCAAGCTGAAAAGAA AGAGGGACCAACATAGTTCAATTATACCAAAATCTACTCTGATAAGTCAACAAGAAAAAGGCTGTAGTGATACAGATGGTGTATCATTTACGGAGCTTGT GAAAGACATACCATTTCCCGTTACATACTATACACTAACAGAGAAACAACTGGAAGAGAATGGATACTCTGTTAATCAGCCAGGTTTTATTTCTACTATG CCTGCTCCTCCGGGATCATTTTGTGAGATGTTGGCGCTTGATTGTGAGATGTGCATAACAAGCGAGGGTTTCGAACTGACAAGAGTTACTCTAGTGGATG TCCAAGGACAGGTTTTGATAGATAAATTGGTTAAACCATCAAATGCTATTACTGATTACAATACCAGATTTAGTGGAATAACGTATGAGATGTTAGATGG GGTGACGACAAGTCTGAGAGACATTCAGGAAGAGTTTCTAAAGCTGGTTTACAAAGAGACTATCCTTGTTGGGCATTCTTTGGAAAATGACTTATTAGCA TTGAAGATATCACATGATTTGGTCATTGACACAGCAGTATTATACAAACACCCACGAGGAGCATCTCATAAAACTGCTCTACGGGTTCTGACTAAGAGAT TTCTTTCAAGGGAGATACAACAATCAGAGAAAGGACATGACAGCATTGAAGATGCTAAAGCTACCATGGAATTGGCACTATTGAAGATCCGGAATGGGCC TGACTTTGGTTCCCCTCCATCCTTTATGAGGAAAAAACTCCTTTCCATTTTGAGCGAGTCTGGCAAAACCTCCTCTTTGATTGACAATATATCTGTTGTA AAACGATATGCCTCTGAGTCGTCTCATTCAATTCCGGTGACCTCTGATGATGATGCACTTGCAAAGACCAACAAGGAGGTGAAGAATGATAAGGTACATT TTATCTGGACTCAGTTTTCTGAGTTACAGTCATACTTAAAGAAACAAGCTGAAGATTCAGAGATCTTGAATAAAAGACTCGCAGAGATGATGGCATTACT TACATGCCAGAAAGATTTGACAAAAGGTAAAGACTTGAAGTTGAGTGCATCTTCCGAACTGAAGCAAATTTTGGGTCGCATGGATGCTAGAATTCATAAA CTGTACATGGCATTGCCGACTAATGCCATGTTGATAATTTGCACTGGTCATGGAGACACAGCCGTTGTCCACAGGCTTAGGAGAATGCTTGCTGAGGAGG GTGAAAGTAATTTTTGTAGAGAACAGATTGTTGAAATCTTGGAAGAGCTTCAAGCTCGAGCTGAAGTAGCCTTATGTTTTGTAGGTGTAAAACATTGAGT GTTATCATAATACAAAAATGGATTGAAATTATTCTTGATAACCTTATGTCTTGAGGGCTTGAGAATTTGCTATTACATTTGCCAAATGTTGTTAAAATGG GAAACTGACTCATGTGGGTTTTGTATATTTATATTATGCAAGACTTCTTAATAATAGTGTTGTAAGGCTCTGCCCAGATTCCAAGGTGATCAAAAAGGTC AATAATTCAATTTATGGAAGCAATACTTATTGGTGGACAGTCACACATTTAGAAAGAGATTAATTTCTTACTCAAAAAGGGTGAAAGGATACCATTGGTA GTACAAAAAATGGATATATATAATGAGAATAAAGTATCTCGTTATACAAGGAGATAATTT BLAST
Tissueflowers
Gene nameLI_gene_24792; 
Additional informationdetails; 

Expression of Ll_transcript_231872

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_231872
BlastpSmall RNA degrading nuclease 5 from Arabidopsis with 65.02% of identity
BlastxSmall RNA degrading nuclease 5 from Arabidopsis with 64.38% of identity
EggnogDNA polymerase iii(COG0847)
KeggLink to kegg annotations (AT5G25800)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019442933.1)
PfamExonuclease (PF00929.23)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;