| Id Trinity | FTRINITY_DN52316_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_231860 |
| Sequence | GATTCAATGGACACGTGGGTAGGACTTCAAATTATTTGATCCCTCTACCTCCCTATATGTACTACATCCTTAAACTTAGTTGAAACTTGAAAGTACACAA AGAGTTTGGGATCAAAAAAAAGGAGAGTCTTTTCAACATGAGAACTAGTTGTTGCCTCAACCTTCCACCTCCAACTTCAAACATCCTCATAAAACCACCC CATGTTTCATTGGTGAAAAACGAAGGATATTGGAGGAGGCAATGTATTATGATTGGAGTGGCATCATATTGCACCATAATTGGAATAGAAGTTAAGAACA ATTTAGTGGATAATCATGAAGGTACAAATTTAACTTATGATGAGGTTGTATCAAAAAATAGTTCCTCATCACTAGTTTATGTTAGTGGTTCTAAATGGAG CCAGAAAAGTGCATGCCCTTCATGGAGAGGCAACTCCTTCCAAACCATCGTGCCGGAGAATCTTCCACGGCCAGCCGCCCGGCGGAGATATGAGCTTGTT GGTTCCACCAACAAGGATGCACCACCACTCTCACTTCAACAATCTATCAAACATAGAAACACCAAGGGTAGTTGTTTCTCCATGTGAAATCAAATTAACT ATAAATTATTATATACTCATATACCTCAAAATGTAATGATATATCTTTGGTAGTATAAAAAAAATCTTTTTTGTTTCATAGGTGATGTAGTTAGTACATG TAAAGTAGTTATCTGATTTGTTCTCAACGTGCACCCTTTAAATGCATTAGTAAAGAAGTGCTATGTTGCTAATACACATAAGTGCACCCTGGCTTAGATA AGGAGTGTTAGGATTGTTGTGCAGCACATGATTGAGAACAAACAATCGAATAAAAGAAAAAGAATAAAGAAGAAGAGACAAAAAAAATTATTTGTTAATG AGTTTTGATCAATTTGTAAATACGTTGCCGAAAGCGTAGAGTGACTACCAATATATCGTTAGAGATTAGGATTACAAGCTCCTATAGATGCTCTTGCTGT ATTCTGGTATACACAATACATGTACATATAGCCCTATACTCGGACCTTATACATAACTCAGAAAGCTCATAAAACAGTTTCTAGATTCTATATGTAGAAT GCCGATCCACAGCCAGCCCATGCTCATAAAACAGTTTCTAGATTCTATGAGTTTTAATGCGCGAGACGTGGGCCCCTCTGGAAGATAGTCTCCTAAGATT TTGGAGTCAGCAAGGTGGTAGTCCTCACCACGTTCTTGTCGTGTTTCGTTTTACACGTATGAGCTATGCATAACAATCTCCACTTTGGCAGATATCCTGC TACTTAGGAATTATACACAACAACTTTCACCTTAGTGAATATTCTACTCTCTTTACTAGCTCCTCAATGGGACTTTCTCCACATGAGAGCATGCTTCCCT TTAGTGTTCAATTATTTTTTACTTTGTCATGGAGAAGCCAACCTAAGCCACCTGGCCATGAGCTCTTCCTTTACAAGGTAACGAGCCATTGTCGTACTCT TCTCCGAACTTGTAGTGCACCTTCTCCAAATATGTACCATCATCCAATTGAATAAGCTTCCTAGCTATCTGTTGCTAGAAGACTTTTGACATAATAGATC ATCTACGAGAGTGTACTAACAACTGCTCTCTTTAATACTCAACATAACTAAACCATGGAGTTTTATTGGAAACCCTCAACGACTGTCACCATTCTCTGTA CTAACAATCATATTTAAAAAAAACTCAAATTCCACGCTAAGGATTATACCCACCTCACCTTGCGTCAATGTCAATCAATGTCCGTGCTGCAACTTGCATC TGTGCCAATCCCTATGTTACACTTCACATATATATTAATGTCCATGTCACACCTTGCATCTATGCCAATATTTGTGTGTTATTTTTTTCCATGATGCTAC AAAAACACCATAAGAATTCACCACTTCTCATCTTAGAGCCTGATGCTCCACTTGGTTCCGTTCTAGCTCCATGTGCCTATTGAGACAGTCCCTTTTATAA TGCCTGATCTATTTGATCCTAAAGCACTATGTTTTTTGTCCACCATTGGATTTTGACTGTTTCCCCTTTGTAGAATCATCTCCGTCTCCTTTCCTTCCAC ACCTTTGACCTCCTTTCACATACAGACTGTCACTCCAAGTCCTTTCCGTTGCATTATGTTTCCTTTGACATTGAGGCATTAGTGCAACCATGATCTCATC CTGTTTGGTAGAGTATTCATGTGGGTACGGGTTGCCACCAATTGTTTGTAGGAACTAGGCAAGGAGCACAAAAAATTATTGCTTCATCTTTGTCACCAAC TTTCACGTCAAACTTGTGTAAATCTGCAATTATTTGATTGAAAGTGTTGATATGCTGTATCAAATTAGAACCATCATGCATCTTCATGCATATGGTTCTA GTAACCTTTTCCTTCAACTCATCCCACTCTAGTTGATCTATGTCTGCTAGTTTATTCTCTTGCAATGCCTTCAAAATACCTTGCTAAACCAACACATCTT TAATCCTCATTTGTTCTCAATACGAAATTACCAGTTCCATCGAACTTCTCCGACAAATTTTGAGCTGAGGTTAAGAGTCATTTTATACCAGTTACTCTGA TACTAATTGTTGTGCAACAAAACTGTTGGGAACAAGCAATTGAATAAACATGGAGAATAAAGAAGAGACAAAACACAAGGATTTTTTAACAAGGTTCAAC CAATTGTCCCTATGTCCCTGGGAGCATTGAGCGGCTATAAATATATCATTATAGATTAGGATTACAAGCTCTTACTCAACTAAGATATACAAAATACATG TATATATAGCTTTCTATCCGGACAATTGTATAACCCTAAATGCCCCTAAAGCAGCTTTTAGATTCTATTTGTTGATTGTCGATCCACTACCTTGCTGGAC ATCATGACCAACCCCTGGATCACTGCGTATCCATGCGTGTGCCAATCCATGGCCATGCTGGCCAAGATGGCCAGCCTGTGGATCTCTGTGTATCCATTCG TGTGCCAATCACGACTGTGGTGTCCAACACGCTCAAGCTGTGGGTCCCTCTGCAAGATAGCCTCTTGGGGTTCTGGGACCAATACAACCATGGTCCTCAT AACCATCTCGCCATGCTTCCTTCTACACTTATGAGCCATGCACACAACAAGGATTTTTTGATAGCAACCTAAGCTGGCTACTGGTATAACTGTGCCTTGT GATCCATTCTTTGTTTATTTCTTTTTGGGGTTTTGTTCTGTTAGTTTTTAATTAAGAGGATTTTCTTAATCAGTCGTCCTTTTGCAGGGCCAGGCAGATG TTGTTTTCAAGTCACCAGAAGATAATTCAACTCTGAATCTTAACGACGTTCAAGGACTTGTGACTTGGGTGCTTGGTGAAGGATTTATGCCATCATGGGT TTTTATCAAGAATAAACCTCTTATTCCCAAAGTGGTTATGCTCTATATGCCAGGCCTGGATGCAGCTTTGTTCTTGTCGCAGTCTAAAAGGTTTCCCAAT TTAAAAAAATTCTGTCGCAAACCAAGGCCACTTCTAGCTCTTAGCCGTATATCAGATAGTATGCAGACAGTGGATGCACTTCTAACATGCAAGCTGAAAA GAAAGAGGGACCAACATAGTTCAATTATACCAAAATCTACTCTGATAAGTCAACAAGAAAAAGGCTGTAGTGATACAGATGGTGTATCATTTACGGAGCT TGTGAAAGACATACCATTTCCCGTTACATACTATACACTAACAGAGAAACAACTGGAAGAGAATGGATACTCTGTTAATCAGCCAGGTTTTATTTCTACT ATGCCTGCTCCTCCGGGATCATTTTGTGAGATGTTGGCGCTTGATTGTGAGATGGTAAGTCAATTTGGTTGAAAGATAGTGCTGTTTTCTTCATGCAAAA GTTAAGTTCTGGGTGATATCTTGATTGTCATTGAGGGATCAGGTTTCTCTGTTTATGAAAAACTGTTCATCTCTTCTTCCTCGATAAGCTTGTTGAATAC TTGCTTAGTAGTGTGAAAATGAAATTTTCAAATTGGCAATTTCATCATAATCTTAAGAGGGACCTTTTACCAATCTGCACAACAATTGATTATTATTTTT CATTTATGAAGTCTAAAAGTCTTAACCTCATCAAATCTGGACCATAGTAGTGGATCCCAAATAGCAGTTTGGAGCAGTCAACTCTAAAAACATTGTAGTA GTATAGCAAATAGTGTTCCTCTATACCAATATACACGATTCAATATAAATAATTTATAATACACGTGGAAACTCAAAACACAGAAGAGTGGTCAAAGTTT AATACATTTATAAATAATACTCTAAGTAATCCATTTAAAAATTTGTACTAATAAAACAAATGAAACATTAAAGACTAATTTTCTTCATGTTTGTCTATGT GTTATGAACATTTAAGTCATAATAGCAAGTCTTGAAAGGATAACCAATTAAGGGTGACCCAGTGCACGAGGCTCCCAAGTAATAGGGTCGAGGGATGGTA GATGAACGCAATCTTATCCTTGCAAGCGAAGAGTTTATTTCTAGGATTTAAACCCATGGCTTTCATGTCACAAGGCAAGCAACCTTACAGTCGAGATTGA GCCGAATGTATACAACAGGCTTGGCTGGAAAACCTTTGGGCTGTCAGGTTTCACTGGAAAATGTGTGGTTAGCTTGAAGAGTAACATATTTGCTTGAGAT GAGGCTGAAACCAGTATTGTCGATGGTGGATGGCAACCTATGATGATTGTCAAAATTCTGCTATCGTGGCATTGCGCAAATAGCAGACATTATTATGGTG GTTGACAAAATAATAAAAAATGTAATATATATGGAAAAAAATATAGAGAAAAAAAAGAAAGAATAACATCAAGAAGAAAACCAACTTGCCTTTTAAAAGA AATAAAAAAAAGTAATGAAGCAGAGAATGAAGAAAGAAGCAGTTGCTGCCTTGCTGTAGAGAAGGAAGAAGGAAGCAGAGAAAGCAGTTGACGTTAATGC CTTATATGAAGCAAACCAACCAACTTCAGAAAACAAACGAGGAAGACGAAGTAGAGAAGTCACATACGAAGCAATTGCCTTGAACGAAGACGAAGCAAAC AAAGCATAAGTTAATGGCTTTGAGTTAGGTTTCCCAATTTATTGGGGGAAAAGCCAAAATTGGGCCTTAGAAAACCTGAAAACCACAAAAGTCCAATAAG AGCAACTTTTCCTCCATGAGCCGCCACCGCCATATCACCATGGCAGTCCTAAAGCTGCAATTGAGGATGTCACCATTTGAAGTGTTTTATGAAATAGCGA ATAGTATTTGACCAAAAAATGCCACCGCTCCATGGCCGCCATTTGACAACACTGGTTGAACACATGAGGAGAAATTTCAGCTGCTATCTGCACTACACAT AAACATGAAGCAACAAGTCACCTGTAGTGGCCAGTGGCAGCTCTGGCTCAAATGAGGCACTATAGCGTGCTATTGACTACACTAATCTGGACAACGACCA TGAGACAGTGATAATATTTTTATTTCCTGATTATTTGAATTTTTTCCATTGCCTTGAAGTCATTTATCTCAATGCACAATGGCACGATTGCATAATTGAC GGGATTGAACACTGACACCAAGTTTTGGTTGTATGCGAAAAACTCAGTGTACTGGATTCATTTCATCCATGGAAGTGGGCTGGCAATAACTGAAATTCAT ATTAACTGAGGTTTTATTGAAACACAGGACCCATAATTCTTTGGAACTTCATTTTACAGTAGTTATGATATTTTTATATGACTAATATCTTTATATTTGT TTTATCATGATCAGTCTCTGTTTATTTTTTTGGTTAGTGCATAACAAGCGAGGGTTTCGAACTGACAAGAGTTACTCTAGTGGATGTCCAAGGACAGGTT TTGATAGATAAATTGGTTAAACCATCAAATGCTATTACTGATTACAATACCAGATTTAGTGGAATAACGTATGAGATGTTAGATGGGGTGACGACAAGTC TGAGAGACATTCAGGAAGAGTTTCTAAAGCTGGTTTACAAAGAGACTATCCTTGTTGGGCATTCTTTGGAAAATGACTTATTAGCATTGAAGATATCACA TGATTTGGTCATTGACACAGCAGTATTATACAAACACCCACGAGGAGCATCTCATAAAACTGCTCTACGGGTTCTGACTAAGAGATTTCTTTCAAGGGAG ATACAACAATCAGAGAAAGGACATGACAGCATTGAAGATGCTAAAGCTACCATGGAATTGGCACTATTGAAGATCCGGAATGGGCCTGACTTTGGTTCCC CTCCATCCTTTATGAGGAAAAAACTCCTTTCCATTTTGAGCGAGTCTGGCAAAACCTCCTCTTTGATTGACAATATATCTGTTGTAAAACGATATGCCTC TGAGTCGTCTCATTCAATTCCGGTGACCTCTGATGATGATGCACTTGCAAAGACCAACAAGGAGGTGAAGAATGATAAGGTACATTTTATCTGGACTCAG TTTTCTGAGTTACAGTCATACTTAAAGAAACAAGCTGAAGATTCAGAGATCTTGAATAAAAGACTCGCAGAGATGATGGCATTACTTACATGCCAGAAAG ATTTGACAAAAGGTAAAGACTTGAAGTTGAGTGCATCTTCCGAACTGAAGCAAATTTTGGGTCGCATGGATGCTAGAATTCATAAACTGTACATGGCATT GCCGACTAATGCCATGTTGATAATTTGCACTGGTCATGGAGACACAGCCGTTGTCCACAGGCTTAGGAGAATGCTTGCTGAGGAGGGTGAAAGTAATTTT TGTAGAGAACAGATTGTTGAAATCTTGGAAGAGCTTCAAGCTCGAGCTGAAGTAGCCTTATGTTTTGTAGGTGTAAAACATTGAGTGTTATCATAATACA AAAATGGATTGAAATTATTCTTGATAACCTTATGTCTTGAGGTAAGGTTCTTCAATATTTAACAATGATTATGCTTATGCTTCTTTGAATATTTATATTA TTTTTTCTGGTAGCCTTTTTCATTTGTCATGACATTTTCTTCCTTTTGGATATCATCAATGAAGTTGCACAAACTTTAACATAGTTGAAACTTGAAATGT TACAGGGCTTGAGAATTTGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24792; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_231860
| Blastp | Small RNA degrading nuclease 5 from Arabidopsis with 67.22% of identity |
|---|---|
| Blastx | Small RNA degrading nuclease 5 from Arabidopsis with 68.68% of identity |
| Eggnog | DNA polymerase iii(COG0847) |
| Kegg | Link to kegg annotations (AT5G25800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442933.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |