Ll_transcript_230954

• Id Trinity: FTRINITY_DN52330_c0_g3_i5
• Name Transcript: Ll_transcript_230954
• Sequence: ACAGCTAGCCATATATCTGAGCTTGGTGCTCAAGTTTTGAATGATCACTGGGTATCTGTCACTTCAGGAAGTGAGGATTATTCTTTCAAGCATATGCGCA GGAATCAGTATGAAGAAAACTTGTTCAGATGTGAAGATGACAGATTTGAGCTGGACATGCTATTAGAGTCTGTCAGTTCAGCTGCTAAACGTGCAGAGGA ATTGTATAATAACATTGCTGAAAATAAGATCAATATGGAGAGTCTGGGCCGTGTTGAAGATCATTTTACCGCACTAAATGTAAGGTGCATTGAACGTCTA TATGGTGACCATGGTCTTGATGTTGTAGACATTTTGCGTAAAAATCCAACTCATTCCCTGCCTGTCATAATTACCCGACTGAAGCAGAAACAAGAGGAGT GGACTAGGTGTCGTTCAGATTTTAATAAGGTCTGGGCTGAAATTTATGCTAAAAATCACTACAAATCACTTGATCACCGTAGCTTCTACTTCAAGCAACA AGATTCAAAGAACTTGAGCACAAAATCTTTGGTGGCTGAGATTAAAGAAATTAAAGAGAAGCAGCAAGAGGAGGATGATATTCTTCAGTCGATTTCTGCT GGAAATAAACAGCCTCTAATTCCACATCTCGAATTTGAATATTCTGATGCTGGGATTCATGAAGACCTGTATAAACTTGTTCGATACTCGTGTGAGGAGG TCTTCTCTAGTAAGGAGTTGTTAAGTAAAATTATGAGACTTTGGGATACCTTCTTGGAGCCAATGCTCGGTGTTCCTTCCCAGTCTTGTAGGACAGAAAG GGTCGAGGACAGGAAAGAAAGCCACAATGCCTGTGATGGAAGTCCTCACAGAGACTCGGTTTCAATAAACTCAAGGTTACCGAAATTGAATAAGAATGAG GCTGATGGTAGGGTAACGGAAGTGAAGAATGCTCATCGGACAAGTTTAGTAGCTAATGGTAAAGAAAATGTATCTGTCGGTGGTGAACTGGTTTGTAGAG ACGATCCAATGATGGATAAAGGGCAGAAAAGTGTAGACTGCAGTGTGAAAGTGTCTGGATTTAGTAAACCATTTGCCTCTGATGAACAAGTTTCTAAAAA TAATGCATCAATTGCAGTTAGAGAAGAAAATAGCCTGAGCAGAACCAATGCAGAATTGAATGCAGGCTGTGTTACTACTCCATCACGGGCTACTGATACC GACGACTCTGTGGCCAAGTGTCAGAGTGCTAATGCTCCATTGGTGGAGGGATGTGACACTACAGCTCCGGTTCCAGTAGTGAATGGGGTGCTAACTGAGA GCAGTAAAGTTAAAAGCCATGAAGAATCTGCTGGGCCTAGCAAAATTGAAAAGGAAGAGGGTGAATTATCACCAAATGGTGATTCCGAGGAAGATAACTT TGTTGGTTATGAAAATTCAAATGCACAGTCAATGGTCAAGTCAAAGCACAATATCGAAATAAGGAAATATCATTCTAGAAATGGAGAGGACGAGAGCTGT CCTGATGGTGTAGGTGATAATGACGCAGATACTGATGACGAGGACAGTGACGATGTTTCTGCAGTTGGTGAAGATGCCTCAGGCAGTGATTCTGCTGGTG ATGAAGGCTCCCGTGAAGATCACGAGGAGGAGGAAGATATGGAACACGATGATGTTGATGCTAAGGCTGAGAGTGAAGGCGAAGCTGATGGAGATGCACA TTCTGTTGGAGATGGTTTGTCATTACCATTGTCCGAGAGGTTCCTTTCGTCAGTGAAACCCCTCACAAAGCATATATCAGCAGTTTCATTTGTTGAAGAA ATGAAGGATTCCAGGGTGTTTTATGGAAATGACAATTTTTATGCGCTTTTTAGGCTCCATCAAATTCTTTATGAAAGGATCTTATCAGCAAAAACAAATT CAATGAGTGCAGAAACGAAATGGAAAACGAAGGATGCTAGTTCCGCAGATCCTTACTCAAGATTTATGAATGCGTTGTACAACTTGCTTGATGGATCTTC TGAGAATGCAAAGTTTGAAGATGAGTGCCGAGCGGTTATTGGGAATCAGTCGTATGTGTTATTCACATTGGACAAGTTAATATATAAGTTGGTCAGACAG CTTCAAACTGTCGCAACCGATGAGGTAGACAGTAAACTTCTCCAATTGTACGAGTATGAGAAGTCTCGGAAACCTGGGAAACTAAATGATTCAGTCTATC ATGCAAATGCACATGTCATCCTTAATGAGGAGAATATATATCGATTGCAATGTTCTTCTACTCCTTCTCGACTTTCCATCCAGATCATGGACAATATGAA TGAAAAGCCTGAGATGTTTGCTGTATCTATTGATCCGGATTTTTCCTCTTATCTGCAAAGCGATTTTCTGTCTGCCTCTCCTTGCAAAAAGGAACCAAAT GGCGTTATACTGCGAAGAAACAAACACAAATATCGAGGCTTAGATGAGCTCTCTGCAATTTCTTCTGCCATGGATGGCGTTAAAGTGATTAACGGATTGG AATGCAAGATAGCCTGCAACTCATCTAAGATTTCCTATGTTCTCGACACACAAGATTTTTTCTTCCGCCCCAGAAGGAAAAGAGGAACATCACGGACCGC GTCCACGTCTACTACCCGACATTCTCGGGAGGAAAGATTTCGCAAATTGTTGGCATAACCTTAATGCTTTGTATACCCATTGCAACAGAAACCCTTTAGA TACAACAAGAAATTCATGTTAAAGCAGTTTAAGACACTCAAATCCATACTTTTTATGTCTAAAGGAGTCTCGGTGCAACAACCTAGGAATCCTTTGGTTG TTAATTTTATTGTCATGATGCAAACATGAAGGTTAGGAGGGGAATGCAAATTGGTGCCTCTTCTATGTAAATAGTTTCCTGCATAATATATTAGTAGAAA TTTGTACCAATTTGATCTTGCTCTTAATTAAAGGTGCAATTATATGGAATTAGATTCATATTTTTTTTTTTTTTTTTCATTGTTCCTATATAATACTTGT CTTGTTGGATTGGTGACCCTAAAATAGATCACCAATGGATTAATGAACACATGAGGTGCAATGGAAAAGCTTTTCCAATGTAACATTACTACTGATTTAT CTTAAGGATAGTATTGAATATGATAGCTTATGAAGTTAGAGTCTAAATCATTATTAGAAATTAGGGTAGTCTCTAGTTTAAGGTAGATAAAACATTTGCG AGGGTAAGGTTGCATATATTTACATTTTCTAGATTATATTAAGTGGAAACTTGGTGTATAGAGCTATCTTTATTTGATGAATTGTGAAGTAACATGAAGA TATCTACATTTAAAAGTTTTAGTGATACAAATATGTAGCTGTTTACTTAGAAATTTGGAG
• Tissue: flowers
• Gene name: LI_gene_24880;
• Additional information: details;

Expression of Ll_transcript_230954

FPKM

• FPAB: 11.3
• FPNAB: 7.7
• LF1: 6.7
• LF2: 6.3
• LF3: 7.1
• LF4: 5.7
• UF1: 4.3
• UF2: 6.4
• UF3: 6.3
• UF4: 5.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_230954

• Blastp: Paired amphipathic helix protein Sin3-like 2 from Arabidopsis with 54.61% of identity
• Blastx: Paired amphipathic helix protein Sin3-like 3 from Arabidopsis with 47.85% of identity
• Eggnog: Paired AMPhipathic helix protein(COG5602)
• Kegg: Link to kegg annotations (AT5G15020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442610.1)
• Pfam: Sin3 family co-repressor (PF08295.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;