| Id Trinity | FTRINITY_DN52332_c2_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_231474 |
| Sequence | ATTGTGAGACTTTTTTATTCACACTTGAAATACCCAACATTCTCAATTATAGAAAAGAACTATATCCATTGACATTAACTCATATTATTGTATACCTAAA TGTATCTAATGTACAAAATGGCAAAATATAAAAAAAAAACTTCATTTTCACTTATAAAATCGAACGACAAAGTATTTCTCTTTTCAGATGAGCATAAAAT TAGGAGACACTGAACTAGGAGTATAGTATACACACTATTTGTTATTAGTCATACACTATCATGTTAAGGAGTCACTATATTATCTTACCTATAATATGTT GGGCTAAAAGATTAGGTTTACCACTTTAGACTATGTAAAAGGTTTATTAAGTGAAATAGGTAAATTTATTTAATTATATTAGACTATTTAATCAAAACTT GAATATAAAAAAACGTAATTTAAATATGTTGGTTTATTTAAAGTGTTCACTTTTAGGACCTGACCCGTTTTCACTGAAGTTGTTGTCTATGAAGTGGTCA CTCAAATCCTCTGACGGCGATTCAGGTGAGCTTCCACCTAATTCTCATAATCCCAACTTCGTCAATTTACTTCTCTAAACGTTTCCCAAACATTCCAATC TCATAGTAGAGTAGAATAGAAAGGAACACGTTCCTGCAACATTGGAAGCTGCTTGCTTACGAAGTGTTTGATAAAATGGCTATTCCAATTTTCATACCTT GGTTGCGTATATATTTCTCTAATCATTGACCCATGTGATGAAAATGTTAATTTAATAGCATATATGATAAACCGCTTTTTAATGGGTATAAGTACATCAT ATTTCAACCCCTTACATTCACCATCATATGTTACTTTTTCGTAATTTTATACTGGAGGGTATTTTGTTTTCAATTGGTTATGATATTGTCATTGTGTCAT TTTTTTATTTGAAAAAAAGGTTTTTCAGGCAACTGACTGCCATTGCATGAGTCATCAGATCACTCTTATCATATGTTTCCAGAGCATCGTCCACACTTTT TTTATGAGGTTAATGCTAGTTGGAAATTAGTGGTTTGAACTTTGAATTAATGGGTTTGGAATTCTAGTATACATCCCATCCATGAATTTTAATTGAAGAA TATTACTGTTGTAGCTACATTTATATAGCCTATATGTTTAAATTCTTCTAATGTTGCAGTTGAAGTGTTAAAGAAAAGACGAAACATATGATCCAACATA GAAGTCGTGTTCAGAAATTTGTTAGATTTCTTTCCTGGATCCTGTGGTGAAGGTTAAAAGTCACTTATAATTTCCAAAGCCTGGTCTAATGCTGCTTGAA GCTTCAAACCCTTAAAGTTCTGTGTAAAGAGCTCATAGAAATGTTTGCTGTTCGAAATCTCGCCCCTTCAAAGTTTAAGCCACTCCGTTATTTATCACTT CTTTCTGAGTGCAGAAACCATGCCCAATCGAATCTCTTGCCAATCTCAATACCATACTCAAAACCCCATCTCCAAAGCTTTGCAAAATTCTCACTACAAC CCTCAATTAATTTGTTTAGGACTTTCTCTTCACAGCCTGGAGGTTCACCTCTGAAACAAAACTTGCCCCTTTCCCGTGAAGGTAATTATGATGAAGGCAC TTCATTGTCTCTTTCCGTCTGCCCTGGTTGTGGGGTTTATATGCAGGACTCCAGCCCTAAGCATCCTGGTTATTTTATCAAACCATCTGAAAAGGACCCA AATTATAGACTGCATGCTCATCTTGAACATGGAGCACAAGAGCCAGAGTTCTCCAATTCTGTTAAAACGGGACTTGTTGTTGAACCAGAAAAGCTCAACG CTGGTGATTTGAACTTGACCAGGAAACCAGAGAAGCCAGTGGTATGTGCACGTTGCCATTCATTGAGGCACTATGGGAAGGTGAAGGATCCAACAGTGGA AAACTTGCTACCGGATTTTGACTTTGATCATACGATAGGAAGGAAGTTGGCATCAACAAGCGGGACACGCTCAGTGGTGCTTCTGGTTGTGGATGCAGCA GATTTTGATGGGTCTTTTCCAAGGAAGGTTGCAAATTTGGTATCTAAGACAATTGAGGATAATTCTGCTGCGTGGAAGCAGGGCAAGTCAGGGAATGTGC CTAGAGTGGTACTTGTGGTGACAAAGATTGACTTAATTCCTAGCTCATTGTCTCCAACAACATTTGAGCATTGGATTAGGCAAAGAGCAAGAGAGGATGG AATTAATAAGATTACTCGTTTGCACATGGTGAGTTCGCTGAGGGATTGGGGACTGAAGAATCTCGTTGATGATATAGTTGAATTGGCTGGGTCTCGAGGG AATGTGTGGGCAGTTGGGGCACAAAATGCAGGAAAGAGTACATTAATAAATTCTTTAGGAAAGTATGTTGGAGGGAAGATTTCACATCTGACAGAAGCAC CTGTGCCAGGGACCACGCTAGGCATTGTTAGAGTAGAGGGTGTTCTTCCAAGTCAGGCAAAACTATTTGATACACCTGGCCTTCTTCATCCTTACCAGAT CACAACTAGGTTGACGAGAGAAGAGCAAAAGCTTGTTCACATAAGCAAGGAGTTGAAACCTCGGACATACAGAATTAAGGCTGGTCAATCTATTCACATT GCTGGTCTAATGAGATTGGATATAGAAGAAATGTCCTCGGATACTATTTATGTCACAGTGTGGGCATCTCCTTATCTTCCACTGCATATGGGTAAAGTAG AAAATGCTTCTAAAATGTTTGAAGATCATTTTGGCCGCCAGTTGCAGCCACCAATCGGGGAGAAACGAGTTCAAGAACTTGGGAAATGGGCGAGAAAGGA ATTCCATGTTAGTGGAAACAGTTGGGAGTCAAGTTCTGTAGACGTTGCTGCTGCTGGCCTTGGGTGGTTTGCTATTGGACTTAAAGGAGATGCAAAGTTA GGTGTTTGGACTTATGAAGGAGTTGATGTTGTTATTCGTAATTCTTTGATACCCTATAGATCAAATACTTTTGAAGTTGCTGGGTTTACAGTATCCAAGA TTGTCTCTCAGTCTGACCAATCCTTGAATAAGTCACATCAACGAAATGACAAAAAGGCAAAGGCATCAAAAGCGCCATCAAGTTTTGTTGAATTAGCACC ATTAACTTCTGATGGAGGCATCTCCTAATGGTGTCAGTTTTGAAGGAAGTGAGTGGAATTGAATTGCCATTTAGTTTCTGAATGGATAATTTCCAAAAGA TCAAAATTTCAAGTGGCAAATGCAAGCAAGGAGGGTTGCGTAATGGGTGGAGGATCAAGTGAGGCATAAGATAATTTTGCAGTAATCTTTTTATCCAAAG TCCAACCTAAAGTTGTAGCATCTGGATATATCGTTTTCCTTGTAGTTTCCTTAATTCAATTGATGAGTTTTATTACATTTTGTGGGTACTGTTATGCTGC TTCTTAACTTTATTATTGCAGACTAGAAATGTCCCTTATTGTTAGGGTCCTTGCTAGTTACTTGAGTCTTGAACTAACTCAATGAAATGAGTCTAAATCA AATGGGTCTTTAACTGACAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24897; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_231474
| Blastp | GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic from Arabidopsis with 52.81% of identity |
|---|---|
| Blastx | GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic from Arabidopsis with 52.81% of identity |
| Eggnog | Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (By similarity)(COG1161) |
| Kegg | Link to kegg annotations (AT3G57180) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413995.1) |
| Pfam | 50S ribosome-binding GTPase (PF01926.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |