| Id Trinity | FTRINITY_DN52344_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_231898 |
| Sequence | TGGAAAAACACGCGTTTGCGGAAGAACATAAATAAGAAAAAATAGGGATTAAAATTAAACGTAGATGCAGAAAGGGGATAGTGAGAGAAGAGCGAGTGAG CGAAGCGAGTGGACCTTCCGAGTTTGTCTCCGATCCCATCCCAAACATAATTTGTTTCCCCCACTCGCCATACAACAACTTTCAAATTCTAACTTCCGTC ACCTATCCCCGCTTTTTCAGGTTTTCTCTCTCCCTCTTTCCTTATATTTTTTTTCTAGCAATAGTAAGGTTGTTTTTCTTGTGACCTTGTTATGCTTGCG AGGCTGCAAACATCTAATTCTCGGCCCGAGTCTCGTGCACTGGGCCGTCTTAGAAATTATTCTTTTGGAAGGGTTGTAAATGAAAGATGACAAACTCAAC ATAATTGTTAAAAGTCGATGTGGGTCTTGTGTAATTATATTAACTTGTGAGATTTGTGACGTAAAGGTTGTATATTTGCAGAAAATGGGAATAAAGTACT ACTTGTAGTCTAAGAAAATGAGCCCCAAGTTTGAACCCAAAACACAATTTTAAGTGAATTCTGATAGAAAAGCTTCAATACATTTTCGTTGAATAATATG ATTGTGTGGGGTGTTGTTCACACGGTTGAGAGATCATTTTTGTGCTGAGTGATTAACAAGTTTTAATATTTTGCTTCAGCTGAAAGTCGGAAACTTTGAT ACTGTAGCGTCTTTTATAGTGACAGAATGTGGAAAAACTGAATGGAGGTTGTGTTATTTCACTTATTTAGAATTTTGGATTTACTGCTACAGTGGTTGTT TTTTTAGTTTCTTGGTCAAGTGTGACTTTGTGCATAATTGACTTGTTTCAATACCCTGTTTCAATACTTTGTGTAAATAGTATTTAAAGTCATTTTAAGG CTAACCAAATCATGTAATTAAGGTAATTATGATGTTTTGTGATCTTTGCATTTTTATTAAAATAACTCAAGTTCAGCCTCTGTTGTGTAATTCTGGCACA CAGATTTGATCACAAGTCTCTCTTTTCTCTTAATAGTATTTTGTATTTCTTAATTATTTGAAGCCATTCATTATAAATAACATCAGACCTTGAATTTGGG GCAGGCTAACATTGTATAGCAGTTATGGCAAGGTACACAAGGGTTGTATGCTTCTGATTTTTAAATTGCAAGATTTGCACTTATGAGAAACTTGAAGCCA TTTGTCATGATTAACATCATAATATATTCAGAACAGAATGCATGATAGTGAAGTGAGTGAAATATGGTTGATGCATTAAATGAAGCGCAACGCCGGGGTA GTGCCCTAGCTATTTCTCCAAAGAGGGACAGTGCTATGTTTGAAGGGGACAGAGATTTTGAGCCGCACAATGGAATTGAATTTGAATCTCATGAAGCAGC CTATTTATTTTATCAGGAATATGCCAAATCTATGGGATTCACCACTTCAATAAAAAATAGCAGACGCTCAAAGAAAACAAAGGAGTTTATTGATGCCAAA TTTGCATGCTCCAGGTATGGAGTTACACCTGAGTCTGACAGTGGGAGCAGTCGAAGACCAACTGTAAAGAAGACAGATTGCAAAGCCTGCATGCATGTGA AGAGAAGGCCGGATGGAAATTGGATCATTCATGAATTTATAAAGGAACATAATCATGAACTTTTACCAGCTTTGGCATATCATTTTCGGATTCATAGAAA TGTGAAGTTAGCTGAGAAGAATAACATTGACATTTTGCATGCTGTTAGTGAACGCACCAGAAAGATGTATGTTGAAATGTCTAGGCAGTCAGGTGGCTCT CAACGCATTGGGTCTCTCTTGGATGACATAAACTATCAGTTCGATAGAGGCCAATATTTGGCTTTAGATGAGGGAGATGCCCAAGTTATGCTTGAATATT TCAAGCGAATTCAAAAGGATAATCCCAACTTCTTCTATGCTATAGATTTAAATGAAGAGCAACGGTTAAGAAATCTATTTTGGGTTGATGCAAAGAGTAG AAGCGACTATCTCAGCTTTAATGATGTAGTTTCATTTGATACCACTTACATAAAAAGCAATGATAAGTTGCCATTTGCTCCTTTTATTGGAGTGAACCAT CACTCTCAACCTATATTGATTGGATGTGCATTGGTTGCGGATGAGACTAAATCGACATTTGTTTGGTTAATGAAGACATGGCTTAGAGCGATGGGTGGTC AAGCTCCCAAAATTGTAATCAGTGATCAGGACAATGCTTTGAAGACTGCAATTGAAGAAGTCTTCCCAAACGTCCGACATTGCTTTTCTCTTTGGCACGT GCTAGAAAAGATACCTGAAAATCTGTCTTTTGTGATCAAACAATATAAGAACTTCTTGCCAAAGTTTAACAAGTGCATTTTCAAGTCATGGACAGATGAA CAATTCGACATGAGATGGTGGAAAATGGTCTCTAGATTTGAACTCCAATATGATGTGTGGTTTCAGTCATTGTATGAAGACCGGAAAAAGTGGGTGCCGA CATATATGGGGGATGCATTTTTAGCTGGAATGTCTACACATCAACGCTCTGAAAGTATGAACTCTTTCTTTGACAAATATATTCATAAGAAAATCACCCT TAAAGAGTTTGTGAAACAATATGGGATAATTCTTCAGAATAGGTATGAAGAGGAAGCCATTGCAGATTTTGATACTTTGCACAAACAACCAGCACTTAAA TCTCCTTCACCTTGGGAGAAACAAATGTCAACAGTTTATACACATGCAATATTTAAGAAATTCCAAGTTGAAGTTTTGGGTGTAGCTGGCTGTCAATCTA GGATACAGGCTGGAGATGGAACTATCGCAAAATTTATAGTTCAAGATTATGAGAAGGATGAAGAGTTTTTGGTAACATGGAATGAGATGAGCTCAGAGGT CTCTTGCTTCTGTCGAATGTTTGAATATAAAGGCTTCCTTTGCAGGCATGCATTGAGTGTTCTCCAACGTTGTGGCTGTTCAAGTGTTCCATCTCATTAT ATCATGAAGAGGTGGACCAAAGATGCTAAAAATAGCCAATCCTTGGCAGATAGGACTCGTAGGATTCAAACTCGGGTGCAACGTTATAATGACTTGTGTA AACAAGCTATTGATTTGAGTGAAGAAGGATCGTTATCTGAAGAGAGCTATAATGTTGTTTTTCGTGCACTTGTTGACGCCCTGAAGAACTGCGTACTTGT AAATAATTCTAATCACAATGGTGCAGAAACTAGCAACAATTCTTACAGCTTTCGTGAAACAGAAGAAAATCAGGGTATCCTTGCTTTAAAACCAAGTAAG AAGAAGGCCACAGCTAGGAAAAGAAAGGTGCAATTAGAGCAGGATGTTATACTTGATGCGCAAGATAGCCTGCACCAAATGGTCTGTGTTTGCTCCTTTC AATTGTCTATTTTCGTTTTTACAAATGAGCAGAGTGCACTAGATCTCTTGAAAATTATATCATAATATTCATGAACCTCTACTGCTTTGAATCCAGTCCA CAGATCTGCCTATGCTACATCTAACTTGTCCATTCATTCTTGTAGGATAACCTTAGCTCAGATGCAATAACTCTTAATGGATATTACGGTGCCCAGCAAA ATGTGCAAGGACTGGTATTTTATATTTGTTGACCAATACATGATTACATATATCTTTATTTTAAGGAAAAATGTAATGCTTAAATAATATTTTTTGGTTT TTGTAGCAGGTACAGTTGAACTTAATGGAGCCACCTCATGATAGTTACTATGTTAATCAACAGAGCATGCAAGGCCTGGTAAGTTGTCCTAATCAAGATT ATAATTTGCAGACATGATTGTGTTATATGGTTAATTGGTTATGTAGGAATAGGGTTCTGAACTGATATCGATATTCTTGTAGGGTCCATTGAATTCTATG GCTCCAAGCCATGATAGTTTTTTTCGAACACAGCAAAACATTCATGGGCTGGTATGATACTTTTTATTATGTTATGCTATTTGTTTTTCGTTGAAATTAT TGGGAAGTCTGATCATTTGACCAACTTTAAATGATGAAATTTTGCTAAGTCTGTATTGGTTTATCATGTAGGGAGGGCAATTGGAATTTCGTCCAACAAC TACTTTTGGATATAGCCTGCAGGTTTGTGCATGAAATGTGCCATGTCCTAGCATTTGAACTTGGAATAACAAAATTTGCACTTGGTTTTCATTGTCTTTA GTACATAACTTTGATTGCAGGATGAGCCAGAACCTCAGTTTCATGGCAACAGTTCAAGAAATTAGAAGTTGTCCCTTCTCTAATATGATAGTTTCCTCAG ATGCTGTCAAGATTCTATGTGGATATGGTGATGAAAAGATTTTGAACTTTTGAAGGAACTTGGACTGCTCCATTGTGTTAACAACAGTTCATATTTATAC TTCAAAGTTTCTGCTACTATCTTTCCCATCAAAGTTTCTTCATATCTGGACAAGAGTTCACCTTCATGTATTTTACATGGAAGTTGCCTCTTATTGGGCC CCTCAAAATGAATTTATATAGATGAGTACGTAGAGAATCATCTTGCAATTCTGCATGTCACATATTTCGGGTAGCAGAAATATTAGGAACCAAATCTTCT CAGGTATTGGAGTCTGTTGAGAAAGAAGATATCTGTTTCTCGCAACTAAGATGCAGTTGGAAGAAATAAAAGCACAACTGATTTGTATGATTCTTCTCAA CAAAATTCGTCTCGCAAATCGCAAATCGCAAATCGCAAAGTATGTTATTTGCTGCCAATTGGGTTAGGTAGTTGTAATACTTGGAATATTCAGAGTATAT GTATAATAGATGCAACACAAGTTTTGGTATCCATATTTTTCTTTAAAAAATACAAATCTTTTCATATTCCATCTTATTTTCCAAATTCCATTGTAGTATA TATTATATGTTCTTCCAAATTGTTGATGTGTATCATTAAATGATTTGGTTTTCAAGCACTTCATCAATTGTAGCCCAAATGTTTTGCTAGAACTACCATA AAAACAAAGGAGTATACAAACCAATCCTTAATCCTATAATATGAAGTAGACTGATCAAAACATGTTATAATATTGCATTATGTATTATGTTTCTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24960; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_231898
| Blastp | Protein FAR-RED IMPAIRED RESPONSE 1 from Arabidopsis with 68.96% of identity |
|---|---|
| Blastx | Protein FAR-RED IMPAIRED RESPONSE 1 from Arabidopsis with 68.96% of identity |
| Eggnog | Protein FAR-RED IMPAIRED RESPONSE(ENOG410YB4A) |
| Kegg | Link to kegg annotations (AT4G15090) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441488.1) |
| Pfam | FAR1 DNA-binding domain (PF03101.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |