| Id Trinity | FTRINITY_DN52347_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_231088 |
| Sequence | AAGACATACACAGATTTGTGGAGATTGAAACTCCAATACTTTCTAGATCCACACCAGAAGGTGCACGGGATTATTTAGTTCCATCAAGAATCCAGGTATT TACTTATGCTACCTCTTGACAATCTTAAAATTGTCATATTCACATGAATATTATAGTTGAAGACTATCTTAGAACTTTTCAAATATACTCTACTAATTTT TCTACATATTATTCATTGGGTTTCTTCCTCTAGTATAAGGAGTTCAGTTACCAATTTGAGCAACCTTGCATTAGATATCTCTAAAAAGTTAGGATATAAA TTATGGTTTTTAAATGTGTTTCAATTTACAATAGAGTAAAGACCACAACTTATCTATTCCTGATGTAATTAGGTTTAACTTCTTTACAATTAGATCAATT TAATGTTCTTACAATTGTCAAATTAGAAATTACAATGTTGAATTTTAAGAGTTGATGGGTTCCTTCATCGCTTATGCACACACCTTGTTAGCAACACTCT TGATTTTTACCTTATTATGCATGTGCCCTCAAAGCATCATCATGGTGCATATGTACTTTATTTTTGGTGGGGGCTAGTATAAAATATGATAGCAAAAGTC ATATGTTTGCTGCCTATTTTTGTCTAAATTAGGCCACAAAATGATTTATATTCTATTGGAGCAGCATCTGTGATGTGCAAAGCATTGATATGAGCAAAAT CATTCTAAGTCCTTTTATCTATATTTTGCTAATTTATACTATTTAAAATTTAGTGTTGTTTATTCACTAATCACATGAATTATGAAGACAGGGACGTTCT ATGCCTTGCCACAAAGTCCACAGCTATTTAAGCAAATGTTAATGGTAGCTGGTTTTGATAAATATTATCAGGTAGCAAGGTAATAATTTGTTGGTTTAGT TTCTAATGATATTTATGTGTTCAAGATATGCGAAGAGTTTGGTTAGTCTTGACGCATTGTTGTTTTTTGTTTGTTCCTTGTCTCTCGACTTCTGTTTTGG AGGATATGTCGTCCTCCCCCCTTTAGTGCTTTTCCTTTTTTTCTGTTTACCAACTATGTCCTTTCTATTAAAAAATGCATTTGGTTCTAACTTACATAAA CTAAGAAAACAGAATGTTTTTGGTAGATGTTTCCGTGATGAAGATTTAAGAGCTGATAGACAACCTGAGTTCACCCAATTAGATATGGAGTTGGCTTTTA CTCCTTTAGAAGATATGTTGACCCTTAATGAAGAATTGATCAGAAAGGTTTTTCTTGATATTAAAGGTGTGGAGTTACCAAACCCTTTCCCGAGGCTGAC ATACGCTGAAGCAATGGCTAGATATGGTTCAGACAGGCCAGACACCCGATTTGATCTTGAGTTAAAAGATGTATCCGACATTTTCTCAGGGTCTTCCTTC AGGGTTTTGTCTGATTCCTTGGAGAGTGGGGGAGTTATTAAAGTTTTGTCTATACCTTCTGGTGCAAAAAGATACTCAAATTCAGCTCTTAAGAAAGGTG ATATTTATAGTGAAGCACTCAAATCTGGTGCAAGGGGTTTGCCTTTTATCAAGGTCTTGGATAATGGGGAGATTGAGGGGATTTCGGCATTAGTATCGAG TATGGATTCTACAACAAGGGAGAATTTGTTACAGCGATGCTCTGCAGGGCCTGGTGATCTCATTCTATTTGCAGTGGGTCCTCATGCATCTGTAAATAAA ACTCTAGACCGACTTAGAACTCGCGTGGCCCATGACCTAGATTTGATTGACCATGGCAAGCATTCAATTTTGTGGATCACTGATTTTCCAATGTTCGAGT GGAATGATTCAGAGCAGAGGTTTGAGGTCCGTTCTGCTTTTAATAACTTCGACTTCAGCTATGTATTTCTCAATATAATAAGTAATAACATATCTAGTTT TGAATTTCCGTGCTTGTTCATTGTCATTACAGTTATCTTTCCTGTTCCTCTATCATTTTCGTTAAATTTCTGTCATTGTATGAATCGGCAATTTTCTCCA TTCTCTGTTCTTCATTCTGTGGTCATCTTCGTATTATTGTTTAAATTATTGTCTAGTGCAGGCTCTGCATCATCCTTTCACTGCACCAAATCCCGAAGAC ATGAGTGACCTTGCATCTGCTCGTGCATTGGCTTATGACATGGTTTACAATGGAGTAGAGATTGGTGGGGGAAGCTTGAGAATTTATAAGCGCGACATAC AGCAAAAGGTTCTTGAGATTGTTGGCATCTCAATAGAGCAGGCCGAAGCCAAGTTTGGTTACCTTCTTGAAGCACTTGACATGGGGGCTCCACCACATGG AGGCATAGCTTATGGTTTAGACAGATTGGTGATGATGTTGGTTGGTGCTAATTCCATAAGGGATGTGATTGCATTCCCAAAAACAACTACTGCACAGTGT GCCCTCACAAGGTCACCATCTGAGGTGGATCCCCAACAGCTTAAAGATCTTTCAATAACTATTTAGATATATACACACCCCATTTTTGCATTATCCTAAG GAACACTTGATTTGTATGTTTTATTAAAAAAATAATTATAACATTATTGATGTATATCAAGTGGAGTTTTAATTTATATGTATTTTTTATGGAGGGGTTC CAGTTGTGGATTGTATCATTGGACTTGTACTTGTTCATGTTCTTGGTGGTGTATTCTAGCCAAAAATAGTTATGCCGATTAATTTATTTGAATTCTCAAG AGGTAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_24999; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_231088
| Blastp | Aspartate--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 71.21% of identity |
|---|---|
| Blastx | Aspartate--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 76.79% of identity |
| Eggnog | aspartyl-trna synthetase(COG0173) |
| Kegg | Link to kegg annotations (AT4G33760) |
| CantataDB | Link to cantataDB annotations (CNT0000141) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020220208.1) |
| Pfam | tRNA synthetases class II (D, K and N) (PF00152.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |