Id Trinity | FTRINITY_DN52349_c0_g2_i3 |
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Name Transcript | Ll_transcript_231332 |
Sequence | TTGAGACTCGGTCTCCCTCTACTTTGATTCTTTTCTCTTTTATTCAACACACAAGTTGTGGAATCCGAAAACAAACTCCATTTCCAACTCTTTCTTCATT CATAAGCATAAGCAGAGATGGCGAGTCGGTTGAAGGAAGAAGAGAAAAACGAACGCATGATTCGAGGACTTCTCAAGCTTCAACACAATCGTAGATGCAT TAACTGCAACAGTTTGGTTAGTAAGAATAACACGAGAACTCGCGAGTGTTTTATCAATGAAATTGAAATTTATGCATGCTTAGACCTCATTTATTGTGTT AGATTCACCTTCGATTATTTAGAAGTTGCTTTAAATGGATTTCTACTTAGTTCAAATTTGAAAATAGGTGGTTTTAAGTTGGATTCGATGTTGCGGTTAT ATTGTGTTTAGTGCAATTGCGGATAATTGCTAACCACAGTGTAAAACCTGCATTCAGGGAAGACCATTGAACTTGAAATTAATGACACTGTTTTTTTATC TGGTGTTATATTATAATGTACTGGAGTGTGGAGAAATTCTAGCTTGCTCATGGAGTAGCAATAAATGCATGATTAGGAAGATCTATACCAATGATTTAAG TTGGCTATTTTAAGCTTTTATTGAAACGTGCTTAAAATCAATGGTGAAAATCTTCCAAGAGCATCCGGTTTATCGTTGCTCCATGATTATGCTAGATTTT CCCGGAATGTCGTGTGCAGCAGTAGTGATAAAGAAAGCAAAAGCATGATATAATTTCACATGTTTTTGGCATGTGAATCATTAGAATCTTTAATTTAAGT TGGTGGTTGAAAATTAGAGTACGGAATTAGATATTGTGATTACTTAATGTGAGGTCTTACTTAATTAGTAACATAATCTTGACGCGTGGCGTTTTCATTT TAAATTTTGGGAATGCACCATTTCATTTTATGAAATTGATTATCATTCGGCAAAACTACAGATTAAATATTATCCTCAAATTTCATGCATTTGTCTTTGG GAAACACTGGTTTTTTTGTGCTATAAGTGCATATTTGGCATCATAAACTCTTGGAGATGAATATTTATTTTGTATTTGAATAATTTTATATTAAAAAAAA TAGCTAGATGAGCTTATTCGGGCAATCATGCTCTTATTGTTAGTATTAAAATGAAAAATAGGCTGTTGAGAATTAGTTGTTTCACTTGTTGAGATATTTC AAATTTGCTTAAACAGTTGTTTGAAGAGCACTTCTGATGAGTACAGGGTCCATTTGGAACTAAACTATTGTTGACTATATTACTGAGCATTTTAGATTTA AATCACAAAACAAGTTCTAAATAAATCTTTTGGTCCAAGTCCAACGAACAAGAATGAAAACATTTCTGATGCTACTTTAATCATTCAGTTTCAAGGGGCT AAGTTAATTTTTGTAATAATCTAAAAGGCCTCCAAGGAAGGTTTAGAATATCTACTTCTATAGTACAAATTGGGAGATTATTATGAATAATTTAAAGTTT GCTATTGAATTATTTAAGGATGTGTTTAAGTTGCATGTTCCTTTGACTTTGGAGTGATATTGGGATATTTTTAAGAATGATTGCATGTTTCTATTATAGG GCAGTTAACATGTAAATTTGGTCAACTGTCAGATTCTGTATCAACCATTGTTAGAGATAGATTTCATTTCATCCTTGACAGACAGAACAATGTTTCCATT TGTATCTAATAACTTGCTTGTAGCCTGCAGACTACCAAAATTGCAAGGATGATAACAATTAACAGCATCAAGCAACTATTGATACTTCTTTAGATTCCAT TAAAAAAAAGAACCTTTAACGATGAGATAAATTTTAATCTTTGCTTGAATTCTTTTGTTAGGCATATTTGTCATCATGTTGTAGACTTTAACTCATGTGT TGTTAATCTCCAACCACCTTTCAGAGCATTACGATTGCATTCTTCTTAACCTAGGAAGGAAACTTTGGCATTTGACATTGACAGGTGTAGTATATTACTT ATTCTCTTTTCTCTTTTGGAAGGGACCACAATATGTATGTACAAACTTCTGGACGTTTATTTGTGCAAACTGTGGTGGAATACAGTAAGTCCTTACATTT CCTTTGCTGATTGTATTATCTGTATGTCTAAACTGTGCTTTGAGCTGAATATATGTTTTTATAGTTCATGGAGGCCTGCTGTGCTGCCTAATTTTGCACA TTTTAATGAACTTGAATATTTCCATTTGCATTTTGTTTAAATGCTTTGCTTGTGTTTTCCTCATGAATTACTACTCAATGATGAATCTCAAAGCAATTTT ATACTATAACTTGTGTACTTTCTGTATATTGTTGCAATGTTGTTTTTAAGGGATAGGAGTTCTTATACTTGAATGTCTACCAAAATCTGATTTTCCCATT ATCAGGGTATAAATCTCAAACAGTGTAATTATGCTTATCCTCTTATATGGTTCACATGTATCAGTGTATGAACTGTATTTTGTTCAAAATATATTATTCT GTACCGGGAATAGGACAATAATGTCTACTTTGTAATGCACACTGTTCTTTGAAAGTTATCTTTTTTTTTGTTATTTTACAGTCGGGAATTTACACATCGA GTAAAATCCATATCAATGTCTAAATTTACTTCACAAGAAGTTAAAGCACTTCAAGAAGGAGGGAATCAGCATGCAAAAGAAATTTATTTTAAAGAATGGG ATGCCCAACATCAACCTTTCCCTGATAGCAGTAGTGTTAACAGGCTCCGTGACTTTATCAAGCATGTTTATGTGGATAGAAAATTCACTGGAGAGAGGAC CTATGACAAACCACCGAGAGTAACAATGGATGACAAAGACGATTCCTATGAAAACAGGAGAGTTGAGACGAATCAGGGAGGATCTAAAAGTCCTCCATAT GAACGTCAATATGATGACAGGTCTAGTTCGGGTGGAAGAAGTCCTGGATATGATCAAGAAGGTAGGCAATATGGTGATTATAAGAGAGGTTCTGGTTACC CTCCTGTAGTCAATGATTGGCGTCATGAAGATCGTAGAATATCTGAGGAAAGCCAATCTCCTGAGCGAACCAATGACTTGGATTCTTCAAGCTCACCTGT GGTCCGTCCTGTTAGAGATATTTTGGGAGAAAATATATCACCTCTTCGGATAAGTGAACCTCCTAAACCAGACAGTGGAGTAGCTGCTTATGGCTCAGCA CTGACACAGAGAACTGCATCTTCCAGTAGCTTGACATCCAACAATGCAAACCCAATGCCAGAAGATGTTAAGCTTGAGACTATAAAGAGCCTTATTGATT TTGATGTTGATCCTGAACCTCCTGCTGCTCCAGCAATTTCTCAAGCTGAACAAACTAATATGTCTCAACCTGCTGTGCAGCCAGCAAATCCCAGTGATGA CAACTGGGCCTCTTTTGATGTTGCTCCTGGGGCAAAAGCAACTCCAAGCCCTGCAAATATAAATACTCTTGAATCTGTGCTGTCTCAGTTGTCAGTGTCA GCATCCTCACCTGCTCATGTTCCTGGAGTCCAAGGTGATTCACATGTTGCAATAGCTATTCCCAGGGGCAGTATGATGACATTACCAAGAACTGATGACT TATCTGTTACACCTGCAGGAGCTGGTCCAGCATCATCTTTTACTTCTGCTTCTGGACCTGCTAGGGCTAGCAGTTTGTCAGCTTTCCCACAAATTGGTGC TTTAGCATCATCTCCTGGGTTTACAACAGTATCACCTCTTAATAATTCAGGACAGTGGGCCAATTTTCAGCATCAACAACCATTGTTCCCTGTCACTGTG AGTCAGTCTACTACTCAACAATTTACACCACCATTTGGTAGAGCTGTGAATAATCAGCCCTGGAATGCACCTTCTGTACCCATAGTACAAAGACATCCAA ACACACCAATGCCACGTGCATACCATCATGCCTCAAAGCCCGCCAATGAGACTATATCCAGTGTTGTTTCACAACCTTCCACTGTAGAAGTAAATCCAAG TGCAAGAAAAGCGCTCCCTGAGGATTTGTTCACTGTAAAATATTCATCCTTCCCTGCTCCAGTTCGAGGTTGGCAAATAGGTCTTCATCATGGCATGGGT ATCCCAATGCAATATAATAACGTGGTGCCCGTGGCAAGTTTTCTGCAGCCAACAAGATCAACGAATCCATTTGATATTGGCAGTGAGCAAACCCCAAATC AAGCCCCAACTTTTCCTTCCATGTCATCCTTGCAAGGTGCTCTGCCTAGTGTAGCGCCTTCTGTTTCAATGCACCTTTCAGGCCTGAGTTATCCATCAAA TGCCTGGACTCTGCCTCCATCATCATCATATGTATCAGTCCTGCCTGCACAAGCACAAGCACAAACTCATGCATCAGCTTTTGGACCAAGGGCATACATG GGACAACAAATGCCAACCAACATGGGACAACACGTCCCACTTAACATTCCAATACCAAGGCAAGAAGTTGGTAATTTTGGTGCTGGGGGAGCTGCTATTG GCTTGTCAAATCCATATCAACACCTGACAGGAAATTCATCAACCAATCGCAACCCTCATCCTTTCCCTGGAGGAGGGAACCCATTTGGATGATGTGAAAA TTGTCCAAGTGGCCTTGTAAAGTTAAGCATCAACTTCTTCCTCCCTGTACAAATAATGGGTAAGTTCTGTTTATATTGTTTCATTTAGAGTGATTCACAC ATGAATAATGTGCAATTTTAGGTAAGGCTAGGGTCGAAGTCAAATATTTGCGAATGGGTATTACAGGACTGAGATAAATAGTGTATGAATATGAAAGGGG TGCAGGTGACCCTTCGTGGAGGCATTTTTTGTCTTTTTGGGTGCACCACTGTGTTCATTTGTAATTGTATAGTAGATGGGGTGATAATGTGTGCTTATTT GGTGGCCCCTAGTTGTATTCTTTATTCCTTTTACTAATATTATATGATGTATGATTTTGTAATCTCAATTTTGTGAGGATTTATGTTATTTTGACAAGTT TTAAGTTGCCATTTGGTTTCTAGACAAGTTTTTTAGATGCTTCTAGACAAACAATAAAAAAGTAAAATAGAAATATTTTGATTTGTGTATGAGTTGTTC BLAST |
Tissue | flowers |
Gene name | LI_gene_25013; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_231332
Blastp | Probable ADP-ribosylation factor GTPase-activating protein AGD14 from Arabidopsis with 48.04% of identity |
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Blastx | Probable ADP-ribosylation factor GTPase-activating protein AGD14 from Arabidopsis with 52.73% of identity |
Eggnog | ArfGAP with FG repeats(ENOG41122WA) |
Kegg | Link to kegg annotations (AT1G08680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436655.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |