Id Trinity | FTRINITY_DN52368_c0_g1_i10 |
---|---|
Name Transcript | Ll_transcript_231927 |
Sequence | GTACCTGCCATCCCTCCTCGTTTACATATGTTCCGGATCAAATTATGAACGAGTAAAATTTACAGGATTTGTTGGACTATATTAATTTATATTAATTTGT TGGAAATTTTGTTGTAAGATAAGAGGACGAATAATAATAAAAAACTATATAAAGGAATTGCAAAATGAGGAAAACCTAGAGAGAGATCGAAGCAATAAGA AATGGCGAACTCAAACTGGAACGTTAGTCTTCAACCCACAAAGCTTGTCGTTTTGGCTGATCTCAACGTTGATCCTCCTGAAAACGACGATGACGACGAT TCCCCCTTTCTCGTTCCTCCTCCTCCACCTTCACTTTCAAGGTTGACAATTGATGAAAACACTCAAGATAAGAGTTTGTTGTCCAAAGACACCGATGTTA TTGAAGGCGAAGGCAAGAAATTGAACAAACTGGGGAAATGCCGCTCCAGGCTAAGCAAGACAGATACTTCTCTTGATTGTGGTGCTGATGCAGAGGGTGA TCAACATGTTCATGGGGCTCCTTCCACTCGGGAGGAAAAAGTTAGCAGCATCAAGACTGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCTCAT GCGCATTTTATACTTGGCTTGATGTACCAAAGATTAAGCCAACCTCAAAAGGCGGTACTGGCTTATGAAAAGGCAGAAGAGATCTTACTGAAGCCTGAAG CTGATATCGATAGGCCAGAGATGCTTTCTCTAGTTCAGATTCATCATGCACAGTGCCTGATTCTAGAAAGTTCATCAGAAGATAATTCAGATAAAGAACT TGAACCTCAAGAACTTGAGGAAATTCTTTCTAAATTGAAAGAGTCTGTGCGGTCAGATATCAGACAAGCAGCTGTATGGAATACATTAGGGTTTATCCTT CTTAAAACCGGTCGAGTGCAGAGTGCTATTTCAGTTTTGTCATCATTGTTGGCCATTACACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTT ATCTCCAAATGTAAGTTTGAATGGTAATTAACTCTTAATTTTTGGGTCTAAACAATTGCACTTGTTTGTTATTAGTTTTTATACTGTTTTCATTTTGAGT AGTACATTCAACATATGGTCCATCAATTCCTCATGCAATTTGTGGTAAAAGTGTCATTTTTTGGGGTGTTAATATATATGAGCAATGTGAATAATCAAGC AATTTAAAAAGGAGCAAACATACGATGCTTAAAAGCAGAGATTTGAGAATAAATTTGTCTTATAAATAATTCATGGGATTAACAACCAAAGCCTTTTCCC TATTGGTATGTTTGGGAGTAGGATAAATGTGATCAAAAGTGCGAGTTGAAGCGTCAAATTGCATGGTTCAATGCTTTTCATGGTGAACAGCAAGTTGGTT TGGGGGAAGTGTTCCAGAGCTGGAGCGTGACAGCACAACACTTTGGAGTGGATGCATCCCACATGGCATTCCAGATGCATCCCACGTGACATTCCAGATG CATCCCACGTGACATTCCAGATGCATCCCGCGTGACATTCCAGATGCATGCTACATTGGTCTCTGGGATGGATGTGGTTACCATTTGATGTTTCGGGGAT TTTGTTGGTGGAAATGTTTTTTGAGGGACTAAATTGGTGCCATCGAATTTTTCATGGACCAAAATCATGTTTTATTCATAAATTAAAAAGGATTATGAGT TTTTAATCTATCCATATCTTTCCACAGTACTGTTACTGACTATGTTTCCTTCCAGTGGGAATTTGGATTTTTCTGCAAAATGTTTCCAAGAGTTGATCTT AAAAGATCAAAATCATCCTGCAGCTTTGGTCAACTATGCTTCCCTTCTTTTATGTAAATATGCTTCCGTTGTAGCAGGGGCTGGTGCAAGTGCTGCTGAA GGTGCTTCGGCAGATCAGGTTACTGCTGCTAATGTTGCTAAGGAATGTTTGTTAGCTGCAGTCAAAGCAGATAGCAAATCAGCTCATATCTGGGCAAACC TTGCCTACGCATTTTCTATTAGTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCAGCAAAACTAGATCCCAATTGCATGTCTACTCGTTATGC TGTTGCTACCCATCGAATAAAGGAGGCCGAAAGATCACAAGATCCTAGTGAACTGCTTTCATGTGCTGGAAATGAGATGGCTTCTATAGTAAGAGATGGT GATTCATCCCTGGTTGAGCTTCCAGTAGCATGGGCTGGGCTTGCAATGGTCCACAAGGCTCAGCATGAGATAGCAGCATCATATGAAGGTGAAAAGCATG GGCTGGTGGAAATTGAAGAGCGTGCTGTTTGCAGTTTGAAGCAGGCTGTAGCCGAAGATCCAGATGATGCTGTACAGTGGCACCAACTTGGCCTTCATAG TCTTTGTGCCCGGCAATTCAAAACTTCCCAAAAGTACCTCAAAGTTGCTGTTGCCTATGACAAGAATTGCAGTTATGCATGGTCTAACCTAGGTGTCTCA CTTCAACTATCAGAAGATCCTTCTAAAGCCGAAAAAGTATACAAACGTGCTTTGTCTTTGGCAACAACTCAACAAGCGCATGCAATATTATCCAACTTGG GAATTTTCTACCGCCACCAGAAACAATATCAACTTGCCAAGGCAATGTATACAAAGTCGCTTGAATTACAGCCTGGCTATGCTCCCGCGTTCAACAATCT GGGTCTCGTGTTTGTTGCTGAGGGTCTTTGGGATGAGGCCAAATACTGTTTTGACAAAGCACTTCAATCAGATCCATTGCTGGATGCAGCAAAGTCTAAC TTGAGTAAGGTGGTTGCCATGGTCTAAAAAAGAATACAAGTCCCAAGTCTCTTTCTTCCACGTGGAGAATGCTCACAAGTCTCAACCTGATCTTGGAATT GGAACAATCTAACCAAAAACAAAACATGTGTTGGAAGTTAGAACCTTTGCATTTCATGGTCCCACCAAACCAACCCAACTAGATAAGTTGAACAAGTATA AGGATGTGGCATTGATATACTTTGCAAGGTGACCATTAAAAATAATGGCAGCAGCAACAACCATCATCTCAATTTCCTCATCTTCACTAACTCCAAAACT TCAAAACAGCATCCTCAAACACAAACACAGCCACTATGAACAAGTTCCAACATCCTCTTTCATGGGTACTACAACAATTACTCTTAAGATATCAAAACCA ACAACAAAGCATGGAATTATTACAAAATGCTTAGCATCTTCAAGTAATCTTCCTTCTGCTCTTTTGTTTGACTGTGATGGAGTGCTTGTTGATACTGAGA AAGATGGTCACCGTATATCTTTCAATGAAACCTTCCAAGAGAAAGAACTAGGCGTTGCATGGGATGTGGACTTGTATGGGGAGTTGCTCAAAATTGGAGG TGGTAAAGAAAGGATGACAGCATACTTTACAAAGACTGGTTGGCCTGCAAATGCCCCAGCGGGCGAACAAGAACGAAAAGATTTCGTAGCTTCACTCCAC AAGCGAAAGACGGCACTATTCATGGCCCTTATTGAGAAAAAACTGTTGCCTCTTCGCCCAGGTGTTGCAAAGTTGGTTACTATCTTCTGTTCTTTTATAT TATATCCAATGAATTTATTTATAACAGTTTTAGTTAGATATGAATACAACAACATTCATATTTGTTAAATATGAATGTGAGAATAAAATTGGCATATGTT TTATCTAATAGATATTGTTGAAAGATGTTTAGAACAACTTTGGATAATTGGTTCTTAGAAATTTCATTTGAACTTGAAATTCAACAGAAGTAAATTACCT GCAAAAGAATGGATCTATGACGAGCGAAGCATCCCCTATCACGGATTCATGATCTTGATTCCTCCGTAAACATTAGCCTGATATTGTTTATGATATCACT TAATTTAGATATGAAGTTCATAGTTTTCATGATATACATTGCAAGATTAAAAACTCTATGGTTTATTATCAAGAGACATTAAGTTTGATCCTCATCTTGT TATGTATTTCTTTCTATTAAAACATGCAGGCTTATTGATCAGGCTTTAGGTCAAGGAATCAATGTTGCTGTTTGCAGCACTTCCAATGAGAAGGCGGTAT GCATAATCCGTTAGACAACTCCTAGAATAAATCCTTTTCATACCGAAGGGAATGATGGTCCATACTATTTTAAAGATTCATTTCCTTATAGTAATAGCCT CTCGGTTAAATGTTGATGTTGCGTATAATTGTTCATAATTGCAATACAGGTGTGATTGGATCTACATTTACTTGTTATTTTTATCTTCTGACCTAAATTG CGAGTTTATTTTAGGTCTCTGCAATAGTTTCATTCTTGCTGGGACCTGAGCGAGCCGAAAAAATGAAGATATTTGCAGGAGACGTGGTTCCCCGCAAAAA GCCTGATCCGGTAAGGTCCTCATCCTTGTGACGTTAATTTGGTAATGCAATCATGCCTGCTCCTATTTTACACCCTTGCATCTTAACAAATTTTCATCCA TTCAATAAAAGCTATTTTAAAATGAAACTGAATGATTAAATGTCCTTTATGCCTGTGTAAGAAGCCAAGTATATCTGTTTATTATTCTGAAATATTCAGT GACACTATCTAATAAAACATTTCTTGTGGTATAGCAACCATATAGCACACTCAAGTTGAATTATGCAGTTGTATTTTCTAAATTATTAAATAAGTATCGT GGTGTGATCTCGGAAGCTTATCACATTCGCTCATTCTGACAGGCCATATATCTATTAGCAGCCAACACTCTGGGAGTTGAACCTTCAAGGTATCGCACGA TAGTGTAGTCTGTAGTGCCTATGTAATATAATCCTTGTTCAAATATGATGCATACAGGTATGAAGTTGCTGGTTAGGTTTGATACAGCATGTGCATTCTG CGATGGCTTACTCGATTTTGCAAGAGAAAAATAAAATGAACTGAAGTCTTGGAACATTCTTCGGATAGCCCGAATTTCATTACTTTTTTTCCTACAGATG TGTTGTGGTGGAGGACAGTGCCATAGGCCTAGCAGCTGCTAAAGGAGCTGGGATGAAGTGTATAATAACAAAGAGCGGGTAAATTTCTGTTATATACTTT ATGAAAGTAACTTAATGTTTTTAACAATCATAGAAGTGTTAATCCTACCTTGCAATATCTGATCAGAAAGTTATCTAAGCTTACCAATCTCTACAGAAAA TTGTACCCATCATCATAGAGTAGCCACTATTGTTTGTAGTGAAGGTTGCATGAATGATTTTGTAGCCTTCATATGCCTTCTTGAGAAATTATCTGCCATT AATCATGAAATTTTGTTCTGTACTTATACGCAATAAGCAGCAATGTCAAAATTAGCTATAGGGTAGTTCTCTACTATTAGCCAACCCCACCTAGTGGAAT AAAGACTCGGTTGTTGTTGATGTTATAGTTCTGCGGGAGAAGCATAACTGAACAATATTTATTATAGCTGATTGGGTTTAGGGTATCTCTTACAAGAAAT TTCCTGTGTATCTTAGGTTAAAGAGCTTTTGATGGTTCCTTTTCTTCAACATTATGGTTAAGTATCTGTACTTAATGTTTCAGCATATGCAATGTCATAT AATGCAATAGTTCAATATATGAGGTTGCTCTCCATTGTATATAAGAAAAAGTTGATTTGTACAACTTTTCACAGACACCATGCAGTCTCCCTTTGCTTTT GCTTATGAGGAGTCTTTGTGCAACATTAAGGGTATTTGCCTTGTAACTAGGAGGTCACGAGTTTAAATCACTGGAAAAACCTCTTTGCTTGCGAGGGTAA CGCTGTGTACATTTACTCTCTTCAGACCCCACTCACCGGGAGCCTCGCACCCTAGGCTGCCATTTAGAGTATAAAACACATCTCCAATCTTGAAGTTCAA GAATGGAATATAAATAATAGAACTTGTATATAAGCACATGATTAATTCCAACCAATGTTTTTGGCTCCAAATTTAGCTTTAAATGCAAATGGATTGTGAA CATGAGATTGCATTCTCCTGACTTTATTATCATTACAACTGCAGCTATACAGCAGATGAAGATTTCGTAAATGCAGACGCGGTCTTCGACTTCATTGGTG ATCCTCCTGAGGAGAGATTTGACTTGGCATTCTGTGGAAGCCTACTTGAGAAGCAATATGTGAGCTAGAAAACTGTCAAGTGATGCTCTTGGATTTTGTA TGATTCAAGTTTCCTTCACTATTACTATAACTCTCTAATTCATCTTATGTTTTGAAGCCAATAATATATAACTACAAAAAATGTTATTGCACAATTTGCA ATGGAAAATACCAGAAATACTTTGGACAAAACATTCAATTATAATGTCAATAATTAACATTTTTATGGTGAAAAAGAAAGTTCGGTGATAGGGAAGGGAA GGGAATGGCATTGAGTCTGTCACATTGTGATTTTGGTTGGTTTTGCAATTTTCTAACCATTATCTGCAGTGTTAAAAAACATAGCACAAGGTGATTTTAA TTTAAAACTCAAGACTCCCGAACâBLAST |
Tissue | flowers |
Gene name | LI_gene_25131; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_231927
Blastp | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY from Hordeum with 27.74% of identity |
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Blastx | CBBY-like protein from Arabidopsis with 81.73% of identity |
Eggnog | repeat-containing protein(COG0457) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414885.1) |
Pfam | Tetratricopeptide repeat (PF13181.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |