Ll_transcript_231935

• Id Trinity: FTRINITY_DN52368_c0_g1_i18
• Name Transcript: Ll_transcript_231935
• Sequence: GTACCTGCCATCCCTCCTCGTTTACATATGTTCCGGATCAAATTATGAACGAGTAAAATTTACAGGATTTGTTGGACTATATTAATTTATATTAATTTGT TGGAAATTTTGTTGTAAGATAAGAGGACGAATAATAATAAAAAACTATATAAAGGAATTGCAAAATGAGGAAAACCTAGAGAGAGATCGAAGCAATAAGA AATGGCGAACTCAAACTGGAACGTTAGTCTTCAACCCACAAAGCTTGTCGTTTTGGCTGATCTCAACGTTGATCCTCCTGAAAACGACGATGACGACGAT TCCCCCTTTCTCGTTCCTCCTCCTCCACCTTCACTTTCAAGGTTGACAATTGATGAAAACACTCAAGATAAGAGTTTGTTGTCCAAAGACACCGATGTTA TTGAAGGCGAAGGCAAGAAATTGAACAAACTGGGGAAATGCCGCTCCAGGCTAAGCAAGACAGATACTTCTCTTGATTGTGGTGCTGATGCAGAGGGTGA TCAACATGTTCATGGGGCTCCTTCCACTCGGGAGGAAAAAGTTAGCAGCATCAAGACTGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCTCAT GCGCATTTTATACTTGGCTTGATGTACCAAAGATTAAGCCAACCTCAAAAGGCGGTACTGGCTTATGAAAAGGCAGAAGAGATCTTACTGAAGCCTGAAG CTGATATCGATAGGCCAGAGATGCTTTCTCTAGTTCAGATTCATCATGCACAGTGCCTGATTCTAGAAAGTTCATCAGAAGATAATTCAGATAAAGAACT TGAACCTCAAGAACTTGAGGAAATTCTTTCTAAATTGAAAGAGTCTGTGCGGTCAGATATCAGACAAGCAGCTGTATGGAATACATTAGGGTTTATCCTT CTTAAAACCGGTCGAGTGCAGAGTGCTATTTCAGTTTTGTCATCATTGTTGGCCATTACACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTT ATCTCCAAATGTAAGTTTGAATGGTAATTAACTCTTAATTTTTGGGTCTAAACAATTGCACTTGTTTGTTATTAGTTTTTATACTGTTTTCATTTTGAGT AGTACATTCAACATATGGTCCATCAATTCCTCATGCAATTTGTGGTAAAAGTGTCATTTTTTGGGGTGTTAATATATATGAGCAATGTGAATAATCAAGC AATTTAAAAAGGAGCAAACATACGATGCTTAAAAGCAGAGATTTGAGAATAAATTTGTCTTATAAATAATTCATGGGATTAACAACCAAAGCCTTTTCCC TATTGGTATGTTTGGGAGTAGGATAAATGTGATCAAAAGTGCGAGTTGAAGCGTCAAATTGCATGGTTCAATGCTTTTCATGGTGAACAGCAAGTTGGTT TGGGGGAAGTGTTCCAGAGCTGGAGCGTGACAGCACAACACTTTGGAGTGGATGCATCCCACATGGCATTCCAGATGCATCCCACGTGACATTCCAGATG CATCCCACGTGACATTCCAGATGCATCCCGCGTGACATTCCAGATGCATGCTACATTGGTCTCTGGGATGGATGTGGTTACCATTTGATGTTTCGGGGAT TTTGTTGGTGGAAATGTTTTTTGAGGGACTAAATTGGTGCCATCGAATTTTTCATGGACCAAAATCATGTTTTATTCATAAATTAAAAAGGATTATGAGT TTTTAATCTATCCATATCTTTCCACAGTACTGTTACTGACTATGTTTCCTTCCAGTGGGAATTTGGATTTTTCTGCAAAATGTTTCCAAGAGTTGATCTT AAAAGATCAAAATCATCCTGCAGCTTTGGTCAACTATGCTTCCCTTCTTTTATGTAAATATGCTTCCGTTGTAGCAGGGGCTGGTGCAAGTGCTGCTGAA GGTGCTTCGGCAGATCAGGTTACTGCTGCTAATGTTGCTAAGGAATGTTTGTTAGCTGCAGTCAAAGCAGATAGCAAATCAGCTCATATCTGGGCAAACC TTGCCTACGCATTTTCTATTAGTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCAGCAAAACTAGATCCCAATTGCATGTCTACTCGTTATGC TGTTGCTACCCATCGAATAAAGGAGGCCGAAAGATCACAAGATCCTAGTGAACTGCTTTCATGTGCTGGAAATGAGATGGCTTCTATAGTAAGAGATGGT GATTCATCCCTGGTTGAGCTTCCAGTAGCATGGGCTGGGCTTGCAATGGTCCACAAGGCTCAGCATGAGATAGCAGCATCATATGAAGGTGAAAAGCATG GGCTGGTGGAAATTGAAGAGCGTGCTGTTTGCAGTTTGAAGCAGGCTGTAGCCGAAGATCCAGATGATGCTGTACAGTGGCACCAACTTGGCCTTCATAG TCTTTGTGCCCGGCAATTCAAAACTTCCCAAAAGTACCTCAAAGTTGCTGTTGCCTATGACAAGAATTGCAGTTATGCATGGTCTAACCTAGGTGTCTCA CTTCAACTATCAGAAGATCCTTCTAAAGCCGAAAAAGTATACAAACGTGCTTTGTCTTTGGCAACAACTCAACAAGCGCATGCAATATTATCCAACTTGG GAATTTTCTACCGCCACCAGAAACAATATCAACTTGCCAAGGCAATGTATACAAAGTCGCTTGAATTACAGCCTGGCTATGCTCCCGCGTTCAACAATCT GGGTCTCGTGTTTGTTGCTGAGGGTCTTTGGGATGAGGCCAAATACTGTTTTGACAAAGCACTTCAATCAGATCCATTGCTGGATGCAGCAAAGTCTAAC TTGAGTAAGGTGGTTGCCATGGTCTAAAAAAGAATACAAGTCCCAAGTCTCTTTCTTCCACGTGGAGAATGCTCACAAGTCTCAACCTGATCTTGGAATT GGAACAATCTAACCAAAAACAAAACATGTGTTGGAAGTTAGAACCTTTGCATTTCATGGTCCCACCAAACCAACCCAACTAGATAAGTTGAACAAGTATA AGGATGTGGCATTGATATACTTTGCAAGGTGACCATTAAAAATAATGGCAGCAGCAACAACCATCATCTCAATTTCCTCATCTTCACTAACTCCAAAACT TCAAAACAGCATCCTCAAACACAAACACAGCCACTATGAACAAGTTCCAACATCCTCTTTCATGGGTACTACAACAATTACTCTTAAGATATCAAAACCA ACAACAAAGCATGGAATTATTACAAAATGCTTAGCATCTTCAAGTAATCTTCCTTCTGCTCTTTTGTTTGACTGTGATGGAGTGCTTGTTGATACTGAGA AAGATGGTCACCGTATATCTTTCAATGAAACCTTCCAAGAGAAAGAACTAGGCGTTGCATGGGATGTGGACTTGTATGGGGAGTTGCTCAAAATTGGAGG TGGTAAAGAAAGGATGACAGCATACTTTACAAAGACTGGTTGGCCTGCAAATGCCCCAGCGGGCGAACAAGAACGAAAAGATTTCGTAGCTTCACTCCAC AAGCGAAAGACGGCACTATTCATGGCCCTTATTGAGAAAAAACTGTTGCCTCTTCGCCCAGGTGTTGCAAAGCTTATTGATCAGGCTTTAGGTCAAGGAA TCAATGTTGCTGTTTGCAGCACTTCCAATGAGAAGGCGGTCTCTGCAATAGTTTCATTCTTGCTGGGACCTGAGCGAGCCGAAAAAATGAAGATATTTGC AGGAGACGTGGTTCCCCGCAAAAAGCCTGATCCGGCCATATATCTATTAGCAGCCA
• Tissue: flowers
• Gene name: LI_gene_25131;
• Additional information: details;

Expression of Ll_transcript_231935

FPKM

• FPAB: 4.5
• FPNAB: 2.8
• LF1: 4.8
• LF2: 4.7
• LF3: 4.2
• LF4: 4.2
• UF1: 3.7
• UF2: 4
• UF3: 4.2
• UF4: 4.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_231935

• Blastp: Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY from Hordeum with 27.74% of identity
• Blastx: CBBY-like protein from Arabidopsis with 82.82% of identity
• Eggnog: repeat-containing protein(COG0457)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414885.1)
• Pfam: Tetratricopeptide repeat (PF13181.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;