Ll_transcript_231937

Id TrinityFTRINITY_DN52368_c0_g1_i20
Name TranscriptLl_transcript_231937
SequenceGTACCTGCCATCCCTCCTCGTTTACATATGTTCCGGATCAAATTATGAACGAGTAAAATTTACAGGATTTGTTGGACTATATTAATTTATATTAATTTGT TGGAAATTTTGTTGTAAGATAAGAGGACGAATAATAATAAAAAACTATATAAAGGAATTGCAAAATGAGGAAAACCTAGAGAGAGATCGAAGCAATAAGA AATGGCGAACTCAAACTGGAACGTTAGTCTTCAACCCACAAAGCTTGTCGTTTTGGCTGATCTCAACGTTGATCCTCCTGAAAACGACGATGACGACGAT TCCCCCTTTCTCGTTCCTCCTCCTCCACCTTCACTTTCAAGGTTGACAATTGATGAAAACACTCAAGATAAGAGTTTGTTGTCCAAAGACACCGATGTTA TTGAAGGCGAAGGCAAGAAATTGAACAAACTGGGGAAATGCCGCTCCAGGCTAAGCAAGACAGATACTTCTCTTGATTGTGGTGCTGATGCAGAGGGTGA TCAACATGTTCATGGGGCTCCTTCCACTCGGGAGGAAAAAGTTAGCAGCATCAAGACTGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCTCAT GCGCATTTTATACTTGGCTTGATGTACCAAAGATTAAGCCAACCTCAAAAGGCGGTACTGGCTTATGAAAAGGCAGAAGAGATCTTACTGAAGCCTGAAG CTGATATCGATAGGCCAGAGATGCTTTCTCTAGTTCAGATTCATCATGCACAGTGCCTGATTCTAGAAAGTTCATCAGAAGATAATTCAGATAAAGAACT TGAACCTCAAGAACTTGAGGAAATTCTTTCTAAATTGAAAGAGTCTGTGCGGTCAGATATCAGACAAGCAGCTGTATGGAATACATTAGGGTTTATCCTT CTTAAAACCGGTCGAGTGCAGAGTGCTATTTCAGTTTTGTCATCATTGTTGGCCATTACACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTT ATCTCCAAATGTAAGTTTGAATGGTAATTAACTCTTAATTTTTGGGTCTAAACAATTGCACTTGTTTGTTATTAGTTTTTATACTGTTTTCATTTTGAGT AGTACATTCAACATATGGTCCATCAATTCCTCATGCAATTTGTGGTAAAAGTGTCATTTTTTGGGGTGTTAATATATATGAGCAATGTGAATAATCAAGC AATTTAAAAAGGAGCAAACATACGATGCTTAAAAGCAGAGATTTGAGAATAAATTTGTCTTATAAATAATTCATGGGATTAACAACCAAAGCCTTTTCCC TATTGGTATGTTTGGGAGTAGGATAAATGTGATCAAAAGTGCGAGTTGAAGCGTCAAATTGCATGGTTCAATGCTTTTCATGGTGAACAGCAAGTTGGTT TGGGGGAAGTGTTCCAGAGCTGGAGCGTGACAGCACAACACTTTGGAGTGGATGCATCCCACATGGCATTCCAGATGCATCCCACGTGACATTCCAGATG CATCCCACGTGACATTCCAGATGCATCCCGCGTGACATTCCAGATGCATGCTACATTGGTCTCTGGGATGGATGTGGTTACCATTTGATGTTTCGGGGAT TTTGTTGGTGGAAATGTTTTTTGAGGGACTAAATTGGTGCCATCGAATTTTTCATGGACCAAAATCATGTTTTATTCATAAATTAAAAAGGATTATGAGT TTTTAATCTATCCATATCTTTCCACAGTACTGTTACTGACTATGTTTCCTTCCAGTGGGAATTTGGATTTTTCTGCAAAATGTTTCCAAGAGTTGATCTT AAAAGATCAAAATCATCCTGCAGCTTTGGTCAACTATGCTTCCCTTCTTTTATGTAAATATGCTTCCGTTGTAGCAGGGGCTGGTGCAAGTGCTGCTGAA GGTGCTTCGGCAGATCAGGTTACTGCTGCTAATGTTGCTAAGGAATGTTTGTTAGCTGCAGTCAAAGCAGATAGCAAATCAGCTCATATCTGGGCAAACC TTGCCTACGCATTTTCTATTAGTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCAGCAAAACTAGATCCCAATTGCATGTCTACTCGTTATGC TGTTGCTACCCATCGAATAAAGGAGGCCGAAAGATCACAAGATCCTAGTGAACTGCTTTCATGTGCTGGAAATGAGATGGCTTCTATAGTAAGAGATGGT GATTCATCCCTGGTTGAGCTTCCAGTAGCATGGGCTGGGCTTGCAATGGTCCACAAGGCTCAGCATGAGATAGCAGCATCATATGAAGGTGAAAAGCATG GGCTGGTGGAAATTGAAGAGCGTGCTGTTTGCAGTTTGAAGCAGGCTGTAGCCGAAGATCCAGATGATGCTGTACAGTGGCACCAACTTGGCCTTCATAG TCTTTGTGCCCGGCAATTCAAAACTTCCCAAAAGTACCTCAAAGTTGCTGTTGCCTATGACAAGAATTGCAGTTATGCATGGTCTAACCTAGGTGTCTCA CTTCAACTATCAGAAGATCCTTCTAAAGCCGAAAAAGTATACAAACGTGCTTTGTCTTTGGCAACAACTCAACAAGCGCATGCAATATTATCCAACTTGG GAATTTTCTACCGCCACCAGAAACAATATCAACTTGCCAAGGCAATGTATACAAAGTCGCTTGAATTACAGCCTGGCTATGCTCCCGCGTTCAACAATCT GGGTCTCGTGTTTGTTGCTGAGGGTCTTTGGGATGAGGCCAAATACTGTTTTGACAAAGCACTTCAATCAGATCCATTGCTGGATGCAGCAAAGTCTAAC TTGAGTAAGGTGGTTGCCATGGTCTAAAAAAGAATACAAGTCCCAAGTCTCTTTCTTCCACGTGGAGAATGCTCACAAGTCTCAACCTGATCTTGGAATT GGAACAATCTAACCAAAAACAAAACATGTGTTGGAAGTTAGAACCTTTGCATTTCATGGTCCCACCAAACCAACCCAACTAGATAAGTTGAACAAGTATA AGGATGTGGCATTGATATACTTTGCAAGGTGACCATTAAAAATAATGGCAGCAGCAACAACCATCATCTCAATTTCCTCATCTTCACTAACTCCAAAACT TCAAAACAGCATCCTCAAACACAAACACAGCCACTATGAACAAGTTCCAACATCCTCTTTCATGGGTACTACAACAATTACTCTTAAGATATCAAAACCA ACAACAAAGCATGGAATTATTACAAAATGCTTAGCATCTTCAAGTAATCTTCCTTCTGCTCTTTTGTTTGACTGTGATGGAGTGCTTGTTGATACTGAGA AAGATGGTCACCGTATATCTTTCAATGAAACCTTCCAAGAGAAAGAACTAGGCGTTGCATGGGATGTGGACTTGTATGGGGAGTTGCTCAAAATTGGAGG TGGTAAAGAAAGGATGACAGCATACTTTACAAAGACTGGTTGGCCTGCAAATGCCCCAGCGGGCGAACAAGAACGAAAAGATTTCGTAGCTTCACTCCAC AAGCGAAAGACGGCACTATTCATGGCCCTTATTGAGAAAAAACTGTTGCCTCTTCGCCCAGGTGTTGCAAAGTTGGTTACTATCTTCTGTTCTTTTATAT TATATCCAATGAATTTATTTATAACAGTTTTAGTTAGATATGAATACAACAACATTCATATTTGTTAAATATGAATGTGAGAATAAAATTGGCATATGTT TTATCTAATAGATATTGTTGAAAGATGTTTAGAACAACTTTGGATAATTGGTTCTTAGAAATTTCATTTGAACTTGAAATTCAACAGAAGTAAATTACCT GCAAAAGAATGGATCTATGACGAGCGAAGCATCCCCTATCACGGATTCATGATCTTGATTCCTCCGTAAACATTAGCCTGATATTGTTTATGATATCACT TAATTTAGATATGAAGTTCATAGTTTTCATGATATACATTGCAAGATTAAAAACTCTATGGTTTATTATCAAGAGACATTAAGTTTGATCCTCATCTTGT TATGTATTTCTTTCTATTAAAACATGCAGGCTTATTGATCAGGCTTTAGGTCAAGGAATCAATGTTGCTGTTTGCAGCACTTCCAATGAGAAGGCGGTAT GCATAATCCGTTAGACAACTCCTAGAATAAATCCTTTTCATACCGAAGGGAATGATGGTCCATACTATTTTAAAGATTCATTTCCTTATAGTAATAGCCT CTCGGTTAAATGTTGATGTTGCGTATAATTGTTCATAATTGCAATACAGGTGTGATTGGATCTACATTTACTTGTTATTTTTATCTTCTGACCTAAATTG CGAGTTTATTTTAGGTCTCTGCAATAGTTTCATTCTTGCTGGGACCTGAGCGAGCCGAAAAAATGAAGATATTTGCAGGAGACGTGGTTCCCCGCAAAAA GCCTGATCCGGCCATATATCTATTAGCAGCCAACACTCTGGGAGTTGAACCTTCAAGGTATCGCACGATAGTGTAGTCTGTAGTGCCTATGTAATATAAT CCTTGTTCAAATATGATGCATACAGGTATGAAGTTGCTGGTTAGGTTTGATACAGCATGTGCATTCTGCGATGGCTTACTCGATTTTGCAAGAGAAAAAT AAAATGAACTGAAGTCTTGGAACATTCTTCGGATAGCCCGAATTTCATTACTTTTTTTCCTACAGATGTGTTGTGGTGGAGGACAGTGCCATAGGCCTAG CAGCTGCTAAAGGAGCTGGGATGAAGTGTATAATAACAAAGAGCGGCTATACAGCAGATGAAGATTTCGTAAATGCAGACGCGGTCTTCGACTTCATTGG TGATCCTCCTGAGGAGAGATTTGACTTGGCATTCTGTGGAAGCCTACTTGAGAAGCAATATGTGAGCTAGAAAACTGTCAAGTGATGCTCTTGGATTTTG TATGATTCAAGTTTCCTTCACTATTACTATAACTCTCTAATTCATCTTATGTTTTGAAGCCAATAATATATAACTACAAAAAATGTTATTGCACAATTTG CAATGGAAAATACCAGAAATACTTTGGACAAAACATTCAATTATAATGTCAATAATTAACATTTTTATGGTGAAAAAGAAAGTTCGGTGATAGGGAAGGG AAGGGAATGGCATTGAGTCTGTCACATTGTGATTTTGGTTGGTTTTGCAATTTTCTAACCATTATCTGCAGTGTTAAAAAACATAGCACAAGGTGATTTT AATTTAAAACTCAAGACTCCCGAAC BLAST
Tissueflowers
Gene nameLI_gene_25131; 
Additional informationdetails; 

Expression of Ll_transcript_231937

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_231937
BlastpProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY from Hordeum with 27.74% of identity
BlastxCBBY-like protein from Arabidopsis with 81.73% of identity
Eggnogrepeat-containing protein(COG0457)
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019414885.1)
PfamTetratricopeptide repeat (PF13181.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;