| Id Trinity | FTRINITY_DN52368_c0_g1_i22 |
|---|---|
| Name Transcript | Ll_transcript_231939 |
| Sequence | GTACCTGCCATCCCTCCTCGTTTACATATGTTCCGGATCAAATTATGAACGAGTAAAATTTACAGGATTTGTTGGACTATATTAATTTATATTAATTTGT TGGAAATTTTGTTGTAAGATAAGAGGACGAATAATAATAAAAAACTATATAAAGGAATTGCAAAATGAGGAAAACCTAGAGAGAGATCGAAGCAATAAGA AATGGCGAACTCAAACTGGAACGTTAGTCTTCAACCCACAAAGCTTGTCGTTTTGGCTGATCTCAACGTTGATCCTCCTGAAAACGACGATGACGACGAT TCCCCCTTTCTCGTTCCTCCTCCTCCACCTTCACTTTCAAGGTTGACAATTGATGAAAACACTCAAGATAAGAGTTTGTTGTCCAAAGACACCGATGTTA TTGAAGGCGAAGGCAAGAAATTGAACAAACTGGGGAAATGCCGCTCCAGGCTAAGCAAGACAGATACTTCTCTTGATTGTGGTGCTGATGCAGAGGGTGA TCAACATGTTCATGGGGCTCCTTCCACTCGGGAGGAAAAAGTTAGCAGCATCAAGACTGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCTCAT GCGCATTTTATACTTGGCTTGATGTACCAAAGATTAAGCCAACCTCAAAAGGCGGTACTGGCTTATGAAAAGGCAGAAGAGATCTTACTGAAGCCTGAAG CTGATATCGATAGGCCAGAGATGCTTTCTCTAGTTCAGATTCATCATGCACAGTGCCTGATTCTAGAAAGTTCATCAGAAGATAATTCAGATAAAGAACT TGAACCTCAAGAACTTGAGGAAATTCTTTCTAAATTGAAAGAGTCTGTGCGGTCAGATATCAGACAAGCAGCTGTATGGAATACATTAGGGTTTATCCTT CTTAAAACCGGTCGAGTGCAGAGTGCTATTTCAGTTTTGTCATCATTGTTGGCCATTACACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTT ATCTCCAAATTGGGAATTTGGATTTTTCTGCAAAATGTTTCCAAGAGTTGATCTTAAAAGATCAAAATCATCCTGCAGCTTTGGTCAACTATGCTTCCCT TCTTTTATGTAAATATGCTTCCGTTGTAGCAGGGGCTGGTGCAAGTGCTGCTGAAGGTGCTTCGGCAGATCAGGTTACTGCTGCTAATGTTGCTAAGGAA TGTTTGTTAGCTGCAGTCAAAGCAGATAGCAAATCAGCTCATATCTGGGCAAACCTTGCCTACGCATTTTCTATTAGTGGTGATCATCGAAGTTCCAGCA AGTGCTTGGAGAAGGCAGCAAAACTAGATCCCAATTGCATGTCTACTCGTTATGCTGTTGCTACCCATCGAATAAAGGAGGCCGAAAGATCACAAGATCC TAGTGAACTGCTTTCATGTGCTGGAAATGAGATGGCTTCTATAGTAAGAGATGGTGATTCATCCCTGGTTGAGCTTCCAGTAGCATGGGCTGGGCTTGCA ATGGTCCACAAGGCTCAGCATGAGATAGCAGCATCATATGAAGGTGAAAAGCATGGGCTGGTGGAAATTGAAGAGCGTGCTGTTTGCAGTTTGAAGCAGG CTGTAGCCGAAGATCCAGATGATGCTGTACAGTGGCACCAACTTGGCCTTCATAGTCTTTGTGCCCGGCAATTCAAAACTTCCCAAAAGTACCTCAAAGT TGCTGTTGCCTATGACAAGAATTGCAGTTATGCATGGTCTAACCTAGGTGTCTCACTTCAACTATCAGAAGATCCTTCTAAAGCCGAAAAAGTATACAAA CGTGCTTTGTCTTTGGCAACAACTCAACAAGCGCATGCAATATTATCCAACTTGGGAATTTTCTACCGCCACCAGAAACAATATCAACTTGCCAAGGCAA TGTATACAAAGTCGCTTGAATTACAGCCTGGCTATGCTCCCGCGTTCAACAATCTGGGTCTCGTGTTTGTTGCTGAGGGTCTTTGGGATGAGGCCAAATA CTGTTTTGACAAAGCACTTCAATCAGATCCATTGCTGGATGCAGCAAAGTCTAACTTGAGTAAGGTGGTTGCCATGGTCTAAAAAAGAATACAAGTCCCA AGTCTCTTTCTTCCACGTGGAGAATGCTCACAAGTCTCAACCTGATCTTGGAATTGGAACAATCTAACCAAAAACAAAACATGTGTTGGAAGTTAGAACC TTTGCATTTCATGGTCCCACCAAACCAACCCAACTAGATAAGTTGAACAAGTATAAGGATGTGGCATTGATATACTTTGCAAGGTGACCATTAAAAATAA TGGCAGCAGCAACAACCATCATCTCAATTTCCTCATCTTCACTAACTCCAAAACTTCAAAACAGCATCCTCAAACACAAACACAGCCACTATGAACAAGT TCCAACATCCTCTTTCATGGGTACTACAACAATTACTCTTAAGATATCAAAACCAACAACAAAGCATGGAATTATTACAAAATGCTTAGCATCTTCAAGT AATCTTCCTTCTGCTCTTTTGTTTGACTGTGATGGAGTGCTTGTTGATACTGAGAAAGATGGTCACCGTATATCTTTCAATGAAACCTTCCAAGAGGTGC TTTTCTTAATTACTTAGTGCTTACTCTACTGCATTATTGCATTTGTTTATGCGGTGGAATAATGATGATTGGCATGATTACATTTGGTGTTGTTGTTTCA AAAGTTACACTCACTTAATGTTTATGTCATAGTTATATTTACATCCATTAGGATGGTGATTTTAAATTACAATTACAATTACAATTACCACAATGGCTGA AAATTATGCAAAAATTCAGCCGTATCGGCCATAACTGTGGTCACAATGCCATTGTGAAGACTTCAAATGGAGATTGATATAGTTTCTCAGACAAGAGTAT TATTATTGATTAAGTCAATGTATTAGACCTTACCAAAAAGCGGTTAGTCTAGCGGTAAGGTTACTGTGAGACACGCTTGTTGGTAGGGGTAGTCACGCAC CCCGAAAATGATTAATTCTTTACCTATGAGTGAGAGATATCTTTGGTTATACCAGAAATATATATTACATCTCATGGAAGGTCAATGTAATTTTCTCAAG AACTTCGTACAAATTATGTTACCTTGTTTCGGGTCCACAGAAAGAACTAGGCGTTGCATGGGATGTGGACTTGTATGGGGAGTTGCTCAAAATTGGAGGT GGTAAAGAAAGGTATTTCCATCTTTTCCTCAACTTAAAAATCCTCCATTTTTCAATTGCATTGCCATGATTTCCATTGTTGAATTCATCATTTGGTTGAA GTTGAAACTACACTTGATGTGCCATTTTTAAAGGATGACAGCATACTTTACAAAGACTGGTTGGCCTGCAAATGCCCCAGCGGGCGAACAAGAACGAAAA GATTTCGTAGCTTCACTCCACAAGCGAAAGACGGCACTATTCATGGCCCTTATTGAGAAAAAACTGTTGCCTCTTCGCCCAGGTGTTGCAAAGTTGGTTA CTATCTTCTGTTCTTTTATATTATATCCAATGAATTTATTTATAACAGTTTTAGTTAGATATGAATACAACAACATTCATATTTGTTAAATATGAATGTG AGAATAAAATTGGCATATGTTTTATCTAATAGATATTGTTGAAAGATGTTTAGAACAACTTTGGATAATTGGTTCTTAGAAATTTCATTTGAACTTGAAA TTCAACAGAAGTAAATTACCTGCAAAAGAATGGATCTATGACGAGCGAAGCATCCCCTATCACGGATTCATGATCTTGATTCCTCCGTAAACATTAGCCT GATATTGTTTATGATATCACTTAATTTAGATATGAAGTTCATAGTTTTCATGATATACATTGCAAGATTAAAAACTCTATGGTTTATTATCAAGAGACAT TAAGTTTGATCCTCATCTTGTTATGTATTTCTTTCTATTAAAACATGCAGGCTTATTGATCAGGCTTTAGGTCAAGGAATCAATGTTGCTGTTTGCAGCA CTTCCAATGAGAAGGCGGTATGCATAATCCGTTAGACAACTCCTAGAATAAATCCTTTTCATACCGAAGGGAATGATGGTCCATACTATTTTAAAGATTC ATTTCCTTATAGTAATAGCCTCTCGGTTAAATGTTGATGTTGCGTATAATTGTTCATAATTGCAATACAGGTGTGATTGGATCTACATTTACTTGTTATT TTTATCTTCTGACCTAAATTGCGAGTTTATTTTAGGTCTCTGCAATAGTTTCATTCTTGCTGGGACCTGAGCGAGCCGAAAAAATGAAGATATTTGCAGG AGACGTGGTTCCCCGCAAAAAGCCTGATCCGGCCATATATCTATTAGCAGCCAACACTCTGGGAGTTGAACCTTCAAGGTATCGCACGATAGTGTAGTCT GTAGTGCCTATGTAATATAATCCTTGTTCAAATATGATGCATACAGGTATGAAGTTGCTGGTTAGGTTTGATACAGCATGTGCATTCTGCGATGGCTTAC TCGATTTTGCAAGAGAAAAATAAAATGAACTGAAGTCTTGGAACATTCTTCGGATAGCCCGAATTTCATTACTTTTTTTCCTACAGATGTGTTGTGGTGG AGGACAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_25131; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_231939
| Blastp | Tetratricopeptide repeat protein 37 from Homo with 24.86% of identity |
|---|---|
| Blastx | CBBY-like protein from Arabidopsis with 76.79% of identity |
| Eggnog | Tetratricopeptide repeat domain 37(ENOG410ZG1H) |
| Kegg | Link to kegg annotations (9652) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414885.1) |
| Pfam | Tetratricopeptide repeat (PF13181.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |