| Id Trinity | FTRINITY_DN52368_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_231922 |
| Sequence | GTACCTGCCATCCCTCCTCGTTTACATATGTTCCGGATCAAATTATGAACGAGTAAAATTTACAGGATTTGTTGGACTATATTAATTTATATTAATTTGT TGGAAATTTTGTTGTAAGATAAGAGGACGAATAATAATAAAAAACTATATAAAGGAATTGCAAAATGAGGAAAACCTAGAGAGAGATCGAAGCAATAAGA AATGGCGAACTCAAACTGGAACGTTAGTCTTCAACCCACAAAGCTTGTCGTTTTGGCTGATCTCAACGTTGATCCTCCTGAAAACGACGATGACGACGAT TCCCCCTTTCTCGTTCCTCCTCCTCCACCTTCACTTTCAAGGTTGACAATTGATGAAAACACTCAAGATAAGAGTTTGTTGTCCAAAGACACCGATGTTA TTGAAGGCGAAGGCAAGAAATTGAACAAACTGGGGAAATGCCGCTCCAGGCTAAGCAAGACAGATACTTCTCTTGATTGTGGTGCTGATGCAGAGGGTGA TCAACATGTTCATGGGGCTCCTTCCACTCGGGAGGAAAAAGTTAGCAGCATCAAGACTGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCTCAT GCGCATTTTATACTTGGCTTGATGTACCAAAGATTAAGCCAACCTCAAAAGGCGGTACTGGCTTATGAAAAGGCAGAAGAGATCTTACTGAAGCCTGAAG CTGATATCGATAGGCCAGAGATGCTTTCTCTAGTTCAGATTCATCATGCACAGTGCCTGATTCTAGAAAGTTCATCAGAAGATAATTCAGATAAAGAACT TGAACCTCAAGAACTTGAGGAAATTCTTTCTAAATTGAAAGAGTCTGTGCGGTCAGATATCAGACAAGCAGCTGTATGGAATACATTAGGGTTTATCCTT CTTAAAACCGGTCGAGTGCAGAGTGCTATTTCAGTTTTGTCATCATTGTTGGCCATTACACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTT ATCTCCAAATGTAAGTTTGAATGGTAATTAACTCTTAATTTTTGGGTCTAAACAATTGCACTTGTTTGTTATTAGTTTTTATACTGTTTTCATTTTGAGT AGTACATTCAACATATGGTCCATCAATTCCTCATGCAATTTGTGGTAAAAGTGTCATTTTTTGGGGTGTTAATATATATGAGCAATGTGAATAATCAAGC AATTTAAAAAGGAGCAAACATACGATGCTTAAAAGCAGAGATTTGAGAATAAATTTGTCTTATAAATAATTCATGGGATTAACAACCAAAGCCTTTTCCC TATTGGTATGTTTGGGAGTAGGATAAATGTGATCAAAAGTGCGAGTTGAAGCGTCAAATTGCATGGTTCAATGCTTTTCATGGTGAACAGCAAGTTGGTT TGGGGGAAGTGTTCCAGAGCTGGAGCGTGACAGCACAACACTTTGGAGTGGATGCATCCCACATGGCATTCCAGATGCATCCCACGTGACATTCCAGATG CATCCCACGTGACATTCCAGATGCATCCCGCGTGACATTCCAGATGCATGCTACATTGGTCTCTGGGATGGATGTGGTTACCATTTGATGTTTCGGGGAT TTTGTTGGTGGAAATGTTTTTTGAGGGACTAAATTGGTGCCATCGAATTTTTCATGGACCAAAATCATGTTTTATTCATAAATTAAAAAGGATTATGAGT TTTTAATCTATCCATATCTTTCCACAGTACTGTTACTGACTATGTTTCCTTCCAGTGGGAATTTGGATTTTTCTGCAAAATGTTTCCAAGAGTTGATCTT AAAAGATCAAAATCATCCTGCAGCTTTGGTCAACTATGCTTCCCTTCTTTTATGTAAATATGCTTCCGTTGTAGCAGGGGCTGGTGCAAGTGCTGCTGAA GGTGCTTCGGCAGATCAGGTTACTGCTGCTAATGTTGCTAAGGAATGTTTGTTAGCTGCAGTCAAAGCAGATAGCAAATCAGCTCATATCTGGGCAAACC TTGCCTACGCATTTTCTATTAGTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCAGCAAAACTAGATCCCAATTGCATGTCTACTCGTTATGC TGTTGCTACCCATCGAATAAAGGAGGCCGAAAGATCACAAGATCCTAGTGAACTGCTTTCATGTGCTGGAAATGAGATGGCTTCTATAGTAAGAGATGGT GATTCATCCCTGGTTGAGCTTCCAGTAGCATGGGCTGGGCTTGCAATGGTCCACAAGGCTCAGCATGAGATAGCAGCATCATATGAAGGTGAAAAGCATG GGCTGGTGGAAATTGAAGAGCGTGCTGTTTGCAGTTTGAAGCAGGCTGTAGCCGAAGATCCAGATGATGCTGTACAGTGGCACCAACTTGGCCTTCATAG TCTTTGTGCCCGGCAATTCAAAACTTCCCAAAAGTACCTCAAAGTTGCTGTTGCCTATGACAAGAATTGCAGTTATGCATGGTCTAACCTAGGTGTCTCA CTTCAACTATCAGAAGATCCTTCTAAAGCCGAAAAAGTATACAAACGTGCTTTGTCTTTGGCAACAACTCAACAAGCGCATGCAATATTATCCAACTTGG GAATTTTCTACCGCCACCAGAAACAATATCAACTTGCCAAGGCAATGTATACAAAGTCGCTTGAATTACAGCCTGGCTATGCTCCCGCGTTCAACAATCT GGGTCTCGTGTTTGTTGCTGAGGGTCTTTGGGATGAGGCCAAATACTGTTTTGACAAAGCACTTCAATCAGATCCATTGCTGGATGCAGCAAAGTCTAAC TTGAGTAAGGTGGTTGCCATGGTCTAAAAAAGAATACAAGTCCCAAGTCTCTTTCTTCCACGTGGAGAATGCTCACAAGTCTCAACCTGATCTTGGAATT GGAACAATCTAACCAAAAACAAAACATGTGTTGGAAGTTAGAACCTTTGCATTTCATGGTCCCACCAAACCAACCCAACTAGATAAGTTGAACAAGTATA AGGATGTGGCATTGATATACTTTGCAAGGTGACCATTAAAAATAATGGCAGCAGCAACAACCATCATCTCAATTTCCTCATCTTCACTAACTCCAAAACT TCAAAACAGCATCCTCAAACACAAACACAGCCACTATGAACAAGTTCCAACATCCTCTTTCATGGGTACTACAACAATTACTCTTAAGATATCAAAACCA ACAACAAAGCATGGAATTATTACAAAATGCTTAGCATCTTCAAGTAATCTTCCTTCTGCTCTTTTGTTTGACTGTGATGGAGTGCTTGTTGATACTGAGA AAGATGGTCACCGTATATCTTTCAATGAAACCTTCCAAGAGAAAGAACTAGGCGTTGCATGGGATGTGGACTTGTATGGGGAGTTGCTCAAAATTGGAGG TGGTAAAGAAAGGATGACAGCATACTTTACAAAGACTGGTTGGCCTGCAAATGCCCCAGCGGGCGAACAAGAACGAAAAGATTTCGTAGCTTCACTCCAC AAGCGAAAGACGGCACTATTCATGGCCCTTATTGAGAAAAAACTGTTGCCTCTTCGCCCAGGTGTTGCAAAGTTGGTTACTATCTTCTGTTCTTTTATAT TATATCCAATGAATTTATTTATAACAGTTTTAGTTAGATATGAATACAACAACATTCATATTTGTTAAATATGAATGTGAGAATAAAATTGGCATATGTT TTATCTAATAGATATTGTTGAAAGATGTTTAGAACAACTTTGGATAATTGGTTCTTAGAAATTTCATTTGAACTTGAAATTCAACAGAAGTAAATTACCT GCAAAAGAATGGATCTATGACGAGCGAAGCATCCCCTATCACGGATTCATGATCTTGATTCCTCCGTAAACATTAGCCTGATATTGTTTATGATATCACT TAATTTAGATATGAAGTTCATAGTTTTCATGATATACATTGCAAGATTAAAAACTCTATGGTTTATTATCAAGAGACATTAAGTTTGATCCTCATCTTGT TATGTATTTCTTTCTATTAAAACATGCAGGCTTATTGATCAGGCTTTAGGTCAAGGAATCAATGTTGCTGTTTGCAGCACTTCCAATGAGAAGGCGGTAT GCATAATCCGTTAGACAACTCCTAGAATAAATCCTTTTCATACCGAAGGGAATGATGGTCCATACTATTTTAAAGATTCATTTCCTTATAGTAATAGCCT CTCGGTTAAATGTTGATGTTGCGTATAATTGTTCATAATTGCAATACAGGTGTGATTGGATCTACATTTACTTGTTATTTTTATCTTCTGACCTAAATTG CGAGTTTATTTTAGGTCTCTGCAATAGTTTCATTCTTGCTGGGACCTGAGCGAGCCGAAAAAATGAAGATATTTGCAGGAGACGTGGTTCCCCGCAAAAA GCCTGATCCGGCCATATATCTATTAGCAGCCAACACTCTGGGAGTTGAACCTTCAAGGTATCGCACGATAGTGTAGTCTGTAGTGCCTATGTAATATAAT CCTTGTTCAAATATGATGCATACAGGTATGAAGTTGCTGGTTAGGTTTGATACAGCATGTGCATTCTGCGATGGCTTACTCGATTTTGCAAGAGAAAAAT AAAATGAACTGAAGTCTTGGAACATTCTTCGGATAGCCCGAATTTCATTACTTTTTTTCCTACAGATGTGTTGTGGTGGAGGACAGTGCCATAGGCCTAG CAGCTGCTAAAGGAGCTGGGATGAAGTGTATAATAACAAAGAGCGGGTAAATTTCTGTTATATACTTTATGAAAGTAACTTAATGTTTTTAACAATCATA GAAGTGTTAATCCTACCTTGCAATATCTGATCAGAAAGTTATCTAAGCTTACCAATCTCTACAGAAAATTGTACCCATCATCATAGAGTAGCCACTATTG TTTGTAGTGAAGGTTGCATGAATGATTTTGTAGCCTTCATATGCCTTCTTGAGAAATTATCTGCCATTAATCATGAAATTTTGTTCTGTACTTATACGCA ATAAGCAGCAATGTCAAAATTAGCTATAGGGTAGTTCTCTACTATTAGCCAACCCCACCTAGTGGAATAAAGACTCGGTTGTTGTTGATGTTATAGTTCT GCGGGAGAAGCATAACTGAACAATATTTATTATAGCTGATTGGGTTTAGGGTATCTCTTACAAGAAATTTCCTGTGTATCTTAGGTTAAAGAGCTTTTGA TGGTTCCTTTTCTTCAACATTATGGTTAAGTATCTGTACTTAATGTTTCAGCATATGCAATGTCATATAATGCAATAGTTCAATATATGAGGTTGCTCTC CATTGTATATAAGAAAAAGTTGATTTGTACAACTTTTCACAGACACCATGCAGTCTCCCTTTGCTTTTGCTTATGAGGAGTCTTTGTGCAACATTAAGGG TATTTGCCTTGTAACTAGGAGGTCACGAGTTTAAATCACTGGAAAAACCTCTTTGCTTGCGAGGGTAACGCTGTGTACATTTACTCTCTTCAGACCCCAC TCACCGGGAGCCTCGCACCCTAGGCTGCCATTTAGAGTATAAAACACATCTCCAATCTTGAAGTTCAAGAATGGAATATAAATAATAGAACTTGTATATA AGCACATGATTAATTCCAACCAATGTTTTTGGCTCCAAATTTAGCTTTAAATGCAAATGGATTGTGAACATGAGATTGCATTCTCCTGACTTTATTATCA TTACAACTGCAGCTATACAGCAGATGAAGATTTCGTAAATGCAGACGCGGTCTTCGACTTCATTGGTGATCCTCCTGAGGAGAGATTTGACTTGGCATTC TGTGGAAGCCTACTTGAGAAGCAATATGTGAGCTAGAAAACTGTCAAGTGATGCTCTTGGATTTTGTATGATTCAAGTTTCCTTCACTATTACTATAACT CTCTAATTCATCTTATGTTTTGAAGCCAATAATATATAACTACAAAAAATGTTATTGCACAATTTGCAATGGAAAATACCAGAAATACTTTGGACAAAAC ATTCAATTATAATGTCAATAATTAACATTTTTATGGTGAAAAAGAAAGTTCGGTGATAGGGAAGGGAAGGGAATGGCATTGAGTCTGTCACATTGTGATT TTGGTTGGTTTTGCAATTTTCTAACCATTATCTGCAGTGTTAAAAAACATAGCACAAGGTGATTTTAATTTAAAACTCAAGACTCCCGAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_25131; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_231922
| Blastp | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY from Hordeum with 27.74% of identity |
|---|---|
| Blastx | CBBY-like protein from Arabidopsis with 81.73% of identity |
| Eggnog | repeat-containing protein(COG0457) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414885.1) |
| Pfam | Tetratricopeptide repeat (PF13181.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |