| Id Trinity | FTRINITY_DN52378_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_231886 |
| Sequence | GGAGAAGAAGGGCTATGAGGTACTCTACATGGTTGATGCCATTGATGAGTATGCTGTTGGCCAGCTCAAGGAATTTGAGGGCAAGAAGTTGGTATCTGCT ACCAAGGAAGGTCTAAAACTTGAGGAGAGTGAGGAGAGAGAGAAAAAAGAGATTAGCAGCGTGTGAAAGCGTGGATGAAAATGTTAGGTATGGACGAGCG CACTGTAACATCAAACCCTAACGACAATGGCGAAGGAAAAATGAAGAAGAAACCGAAGGTGGTTGTCATCACCGGACCCACCGCTTCCGGAAAATCCAAA CTCGCCGTCGATTTAGCTTCCCTCTTCCCAATCGAAGTTATCAACGCTGATTCCATGCAAGTCTACCGTGGTCTCGATGTTCTCACCAACAAAATCCCCT TCTCACAACAAAACGGTGTGCCTCACCATTTGTTGGGTTCTATAAGTCCAAACGTAGAATTCACTGCTAAAGCGTTTCGAGATTCTGCTATTCCTATCAT TGATGATATATTGGATCGCAATCATTTGCCTGTTATTGTTGGAGGTACAAACTACTATATCCAGGCTCTTGTGAGTCCATTTCTTCTAGATGATTTGGCA GAAGATATGAATGAAAGCTGTTTGGACGACTTGCCTGGTACCACACAGTGTGATATCAGTTTCATTGCTGAAAATGACTCTTTAAATGATAGTTACGATC TACTTAAAGATATTGATCCAGTTGCAGCAAATAGAATCCACCCAAATAACCATAGAAAGGTCGGAGTCTCATTTCATTATTTATCCTTCCGGAGACTTAT GCAAAGGGCTATTTATTTATCCAGTTAGAGTTACATATGTAACATTTTTGTGATGTTTTTCTGTTGTGTTATGTAAGATGCTTGCACAACCTTTTTCCTT TGTTGTAATTCACATCTTTTTAAGGTGCAACTTGAAGTTTCGGTGTGTTGTCCATCCATTAGAAGCAATAGACCTGTTCAATTCATTTATGAAAAAATTA TATGAATTGCCCAACTGTGGCTGACTCGGCTAGACATGTGTCTATTTTTGGTTTCAGATAAACCAATATATTAGCTTGTATGCTCGTACTGGTGTTCTTC CTAGCAAAGTTTTTCAAGGAAAGGCAGCAGAGGGCAGAATTGGGGTCAAGTTGATAACTTAAGATATGATTGCTGTTTCATATGTGTGGACGCATCTCTC CCTGTACTCGACAAATATGTTGAGCAGAGAGTAGATTGCATGATGGATGCTGGATTACTGAATGAAGTCTATGCCATCTACAATTTGGAAGCAGATTATA CTAGAGGTTTGCGGCAGGCCATTGGTGTCCGTGAATTTGAGCCCCTTCTTAAAACTTGTGTTGTTGAAGACATTTACAAAAAAGAGAAGGAATTGACTGG GTCCAGCACAGAAAAGGGTGAGACATTGCTTGATAGTAATCTGAGGGAGTGGTTGATATCTTCCTCTGATAGTAAATCCATAATTCTTTTGGAAGAAGCA ATTGAAAAAGTAAAAGTTAATACCCGAAGACTTGTCCGTCGTCAGAAAAGGATGCTCAACCGACTGCAAACACTGTTTGGTTGGAACATACACTATGTTG ATTCAACGGAATCAATATCAAGAAAATCAGAAGAGGTATGGGCTGGCCAAGTGGTTGAGTCTGCCATGAAGATAATTAGATCATTCCTGAGTGAGAATGA AAGCTTGACATCCACCGTTGAGTTGTCTAATATGACTGGGATGAAAATAATCCAGAGGGACCTCTGGACTCGATATATATGCAATGTATGTTTTAGAATG GGACTTTAGCTGCTTTCTTATGACAAGAATAACATCTTCATTGTTTTGCTTACTGACCACCCTTCAATCACATCTTTTTATTGGGATAGAGGAAACAGAG TGATTCTCATGGCCAGTTCTAGCTCTAGGTTTCGTTGCATTGCTTTTGATTTAATGCCTTGATGCAAATCTGGGCCACAGATTGCAAACATCTCACCATA TTCTGTTTTTTATGAGCTTCCTTCCTATTGACAGGCCTGTGGAGATCGGGTGCTTAGAGGATCACATGAATGGGAGCAACACAAACAAGGTCGTGGGCAC CGAAAACGTGTTTCTAGTCTCAACAGGAAGGCACGGGGTCTTACTTTCGTGGAACAAAAGCTGGAGTATTCCGAGTGCAACTAGCTTGAATATATCTTCT AAATTTGCAGTTGACTCTGCTTAGCTGTTAGCATGAAGAAGATCAACCGCTGCAGTTTATGTCATTGACACCATACAATTCCATGTCGTGTCACATGAGT AATTTTCTTTTTAAATTCTTGTGGCGTAACATTCAAGTTTTTAATTCCTATTATATTTAAGGGTCATATGTTAACCTGCTGAGGATAAGGAGTGAAATTA AGGTATAGGTAAGGGTCATATGTTAAACTAAATTCATTAGTACTTGTAGGAATAAATTCTTTATTTTTTCAATATAAAGTTATGCTCATTTATGCTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_25167; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_231886
| Blastp | tRNA dimethylallyltransferase 2 from Arabidopsis with 53.26% of identity |
|---|---|
| Blastx | tRNA dimethylallyltransferase 2 from Arabidopsis with 58.97% of identity |
| Eggnog | Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (By similarity)(COG0324) |
| Kegg | Link to kegg annotations (AT2G27760) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448813.1) |
| Pfam | IPP transferase (PF01715.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |