| Id Trinity | FTRINITY_DN52406_c4_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_87529 |
| Sequence | CAGGGTTGTTATACATTGCCTATACGGGTAAAGGATGCTTTTCTAGGAAACTTGTGAAATTCCTTTTATAAGCTATAATAAATTGAAGTGAAGTTATATA TATCAACATATATGTATGTGAAAGACATTTTCAGTCAACTCACTAAAAAAGAAGCATAATGGCTATGCCCATTCAAGTTCAAGTAAAGGTATGGATGTTT GTTGGTTTTGTTTCATCTGTTGTTGGATTGCTTTGTTATGCTCTCAGTTCCTCCTTCAACAAACTATTTGGAGAGTGGAACTTCTTCAAAATCTTTCTCT ATGTTATAATCAGTTTCACCATCTTCTTCATGACTTTGGTTGCAAAGGTTTTAGTTATTCCCTTATCATTATTAGTTCCTGGACAGATATCACACCCCAA ATTGAGGATTTTGAAGTAAATGTCATTGAAGTGGATTCACATCACTTGGTCATTGAAGTGGATTCACTTAGACATCAGGTACCAGCTAAGATGCACGGAT CGTTGGATAAAAACTGTGAAGAAATTAAATCTTTGTTGAGAATGGAGTCAAAAGAAGTTCAAAAGATTGGTATTTGGGGCATGGGTGGCATGGGTAAGAC AACCATGGCCAAAACTGTTTTTGATGAACTGTCTTCTCAATTTGATTGTATTTGCTTTCTGGCAAATGTACGTGAAGATTCAAGTAGGTATGGACTTAAC TATGTTCGCAAAAGACTTTTTTCCGAGTTACTAGGGATAGATGTTGATATTGACGCTCCCAGAGTACCCTCTAATGCTATGCGTATGCTGGTGAATAAGA AAGTTCTAATCGTATTAGATGATGTGAGTTCATCAGAACATGTAGAGAAATTGATTGGAGTAGGGCATGACTGGCTAGGTGCTGGAAGCATAGTCATTTT AACAAGCAGAGATCGGCATGCGCTTCTGAGCGCAAGAGTTAACGTGTTTTATGAAGTCCAACCAATGAACTTTCAAGACTCCCTTGAACTATTCAGCATA TATGCCTTTAACCAAACCCATCCTGAAACAGAATATGAGGAGCTATCAAAGACAGCAGTTGGTTACGCCAATGGCATGCCCTTAGCTTTGGTAGTTTTAG GATCATCTCTTCACTCCAAAACTAAAAGTGGATGGGAAAGTATACTAAAAAGACTAACGATGATTCCCGAACCAAATATTCAGGAAGTTATGATATTAAG TTTCGATGAATTAGCAGATGCAGAAAGAGAAATATTTCTAGACATTGCGTGTTTTTTTGAAGGGCGTCATATAGACCAAGTATCAAGAGTATTAGATGCT TGTGGTTTCTTTGCAGATATTGGGATTAAAATCCTTTTAGACAAGGCTCTTATAACTATTGATTCATACGGTTGTATTAAAATGCATGGCCTCTTACGGA AGATGGGTTGTGATATTGTTTATCACGAATCTATCAAGAACCCTGGAGAACGGAGCAGACTGTGGAACTCTCAGGACATCATGGATGTGCTGACAAGTAA TAGAGGAACAGATGCTGTTGAAAGCATGTTCTTGGATATGACTCAAATTCCTAATCTACACTTAAGCTCATATGCCTTCAAAAAGATGCCAAACCTAAGA TTACTTGCTTTTGATAGCAGCAACAGTTCAGTGATTAAGAATCCTGTGAGCATTCCGGAGGGTCTTGAATTGCCTGCTAACTTACGATATCTGCAATGGG ATGGATATCGATTGAAGTCTCTACCATCAATTCGGTGGGAAAAGCTTGTTGATCTATCCATGCCACACAGCAACCTTCAAAAACTTTGGGATGGAGTACA GAATATGCCGATGCTAAAGAGAATTTATCTTCCTTTCTCAACGCTTCTGATAGAGTGTCCAGATTTTTCTGGTTCACCAAATCTTGAATCTATCTCATTT CGTGGTTGTGAAAATTTGGGTCAACTTCATCCATCTACTTTCACTCTCCAAAAGCTTAAAGAATTAGATGTGAGTGAATGCACATTGCTTACCAGCCTTT GCAGCAAAACTTGTTCACCATCTCTCCAAAGATTGTATGCTGTGGGATGTACCAATCTCCAAGAGTGCTCAATCACAACGCCTGGCGATCAATGCAAAAC TCATTTGCATATGAACTCTGAACTCAGAGAGTGATCAAGCAGCAAGGACAAAGGTGTGTGCAGTGCCAAATGGGGTTGAGGGTTTGGCATCATCATCTAT GTTCTTATCAAATTGCTTATTGGGTTCTTTATTCTCAATTCATGATTATGAGATCATTAGGTTCTGTTGGATATCTTACTTTTCTGCATAATATAGTAGT AAGTTGAATTTTTATTTGATAATTAGAAATAGTGAGTTAATGCCACATTTCTGAGATTAGTGTGATTGAAAAGTTACCTTGTCTACTGGGTCTGCCTGGA GTTCATAAACTGCAATAAGATCTTTTGATCATGTGATAAGATTTATTTCCTGTAATGCTTTTATAATAAATGGTAGATTTAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_25368; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_87529
| Blastp | TMV resistance protein N from Nicotiana with 34.6% of identity |
|---|---|
| Blastx | TMV resistance protein N from Nicotiana with 34.65% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446043.1) |
| Pfam | NB-ARC domain (PF00931.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |