Ll_transcript_88096

• Id Trinity: FTRINITY_DN52419_c8_g4_i1
• Name Transcript: Ll_transcript_88096
• Sequence: AAAAAATTAAGGTAACATTTAGGTCTTCACTCTATAATTTATTGATTGGGGAAAAAATGCACAAGAAGGTTCTATTTATCCAAATAATGTATTTCCCTCT CTGAAGAAACAAAATGAAGTAGCTCATCACTGCACCAAACATGTCTCTTTTCAAATCATTCACTTCAAATTCTTCTGCTTTCAAACCCATGGAAACAACC ATGGCTATGTTCATGCACATTTCTTCCTACAGGGTACTCTCCCGTACTGTTTGTTCATCCTCCAGGAGAACTAGTTCTTCTGGCTTATTTAATTCCCGGG GAATATCGTCAGTTAAAGTGCTTTCTCTTTCAAACATGTCAAACTACTGTACTCATTCAAGGGATGAGATTTCTTCTTCAAAGCGAAGATCACGAGGGCC TGTTATGGCCGGAAAAAAGGCTGCAGAAGGAACAAAGCAAGAAGATGGTAAATACAAGCACACAGTCGATCTTCCCCAGACAAAATTCGGCATGAGAGCG AATTCTTCAGTAAGGGAGCCTGAAATTCAGAAAATGTGGGAGGAGAATCAAGTATTTCAGAAAGTTGTTGACAAAAATAGTGGAGGAAATTTTGTTCTTC ATGATGGCCCTCCATATGCTAATGGTGACCTTCATATTGGCCATGCCTTAAATAAAATTTTGAAGGATATCATAAATCGCTATAAGCTCCTTCAAAACTA TAAAGTTTACTATGTGCCCGGATGGGATTGTCATGGCCTACCAATTGAATTAAAAGTTTTACAGTCACTGGATCAGGAGGCTAGAAAAAATCTCACACCA TCGAAGTTGAGAACAAAGGCCGCTAAATTTGCCAAAGAAACTGTTAAAACTCAAATGTCATCTTTTAAGCGCTTTGGAATATGGGCAGACTGGAATAATC CGTATCTCACTCTAGATCCAGAATATGAAGCTGCCCAGATTGAAGTATTTGGCCAGATGGCCTTGAAAGGCTACATCTACAGAGGTAAAAAACCCGTACA CTGGAGTCCCTCGTCACAAACAGCACTTGCTGAGGCTGAGTTGGAGTATCCTGAAGGGCATGTTTCGAGAAGCATATATGCCATTTTCAGAGTTGTCAGT GCTCCTCAAATGTCAAGTGACCTACTACAAGAATTTCCAAATTTATGCTTGGCCATATGGACTACAACTCCCTGGACTATTCCTGCAAATGGAGCTGTTG CGGTAAATATGAAGCTTGAATATGCTGTTGTTGAAGTAGAGCCATTAATAGAACATGTCTCGTCATCTGTCGAAACCAGAAAGAAAAGGCTTGGAAATGT TTTGAAGGATGAGAAGAAGCTGTTTCTTATTGTTGCTTCAGAACTTGTGCCAAAGTTAGAGGCGAAGTGGGGTGTGAAGCTTGTTGTCAAGAGAAAGCAG CTGGGTTCTGACTTGGAAAACTACAGATACATCCATCCAATAGATAATGCGGAACGGCCAGTTGTAATTGGAGGAGATTATATTACGACAGAAGCAGGAA CAGGACTGGTCCATACAGCTCCTGGACATGGTCAGGAGGATTATGTGACTGGTCAGAAGTATGGGCTACCGATAATTTGTCCGGTAGATGAGAACGGGAT ATTTACTGAAGAAGCCAGACAATTTAGTGGGCTTGATGTTCTTGGTGAAGGTAACACTGCTGTTGTGAAATATTTGGATGAAAATTTGTCACTCATCATG GAAGAATCATATGAACACAAGTATCCATATGATTGGCGTACAAAAAAACCTACAATATTTAGAGCAACAGAGCAATGGTTTGCATCAGTAGAGGGATTTC GCGATGCTGCTATGGATGCTATTGGCCATGTAAAATGGGTTCCACCTCAGGGAGAAAATAGAATCTCGGCAATGACTTCGAGTCGCTCTGATTGGTGTAT ATCACGACAAAGGACATGGGGTGTCCCTATTCCAGTTTTTTATCATCTGCCATCCAGAGAACCTCTCATGAATGAAGAGACAATTGACCATGTCAAATCT ATTATATCCCAAAAGGGAAGTGATGCATGGTGGTACTTGCCAGTAGAGGAACTTCTACCACCTAAATACCGTAATAAAGCAGCTGAATATGAAAAGGGAA CTGACACAATGGATGTATGGTTTGATTCAGGTTCCTCTTGGGCTGCAGTCTTGGGTAAAAGAGGTCCCCTTAGCCTTCCTGCAGACTTGTATCTTGAAGG AACAGATCAACATCGAGGGTGGTTTCAGAGTTCATTGTTAACCAGTATAGCCACACGAGGGAAGGCTCCATACTCTTGTGTTGTAACACATGGATTCGTA TTGGACGAGAAGGGCTTAAAAATGAGCAAGTCTTTGGGTAATGTTGTGGATCCAAGAAGTGTCATTGAAGGAGGTAAAAATCAGAAGGAAGCACCTGCAT ATGGAGCTGATATTCTGCGACTCTGGGTTTCTAGTGTAGATTATACAGGTGATGTGATGATTGGCCCTCAGATTATTCGTCAAATGTCTGAGATTTACAG GAAGTTACGGGGAACTTTGAGATACCTCTTGGGAAATCTTCATGATTGGAAAACAGATTATACTGTTCCATACCATGAACTTCCTAGGATTGATCAGCAT GCACTATTTCAGCTTGAAAATGTTGTAAAAAACATTCAAGTGAATTATGAAAGTTACCAGTTTTTCAAAATATTTCAGATTTTACAGAGGTTTGTCATTG TTGACCTGTCAAATTTCTATTTCGATGTTGCCAAAGATCGACTATATGTTGGTGGATCAACAAGTTACACAAGGAGAAGTTGCCAAACAGTTCTTGCAGC TCATCTCCTTTCCATTGTGAGAGTAATAGCACCAATATTGCCCCATTTAGCTGAGGATGTGTGGCAGAATCTTCCTTTTCAGTATACCGCTGAATATGGT TCTGTTGCTGAATATGTATTTGAATCAAGATGGCCCACCTTGAATGAAAGATGGCTTGCATTACCTGCTGAAGAAATTGAGCTCTGGGAAAAGATTCTTG AGCTGAGAACAGAGGTGAATAAAGTCTTGGAGGTTGCTCGTACTGGAAAGTTAATCGGTGCCAGTTTAGATGCAAAGGTTCATATTTATACATCAGATGC CAGCCTAGCATCCCAACTATCTGAACTATCTGCAGCCAAAACTGATGCCGATACATTAAATCGTCTATTCATAACATCTCAGGTTGAAATTCTTTCTTCA TTGGAGGATGAACATAATGCAAATATACCATATAGTGGTGAATGCTTAATTCAGGGAAAGAGTAAAGTATGGGTTGGAATATCTAGTGCTGGTGGTTCCA AGTGTGAAAGATGTTGGAATTATTCAGAGCATGTTGGTTCATTTTTGGACCACCCTACCCTTTGCACACGCTGCCATGATGTTGTTGCTGTTCAGATGCC CCCTCAAGTAGCTCTAGCCACTTAAGGTTTTAAAGGGCATAAAATTTGTTTGGATTTTAACTTCAATTTTGTTTTCTAATTATAAAAATATTATCATTCT TGGATTTTAAATTTACCCACTTATTATTCTTGGACATTAATGTTATCAATAAATCAAAGTTCAACTCTTTTCCATCTCCTAAATTGATTTGCAGATTTGC AGATATGCCAATGACAGTTTGTGTAGTTCCTGTAGACTACATCATAAAAAATGTGCTTTACAACAATGTTATGGAGTATGCATA
• Tissue: flowers
• Gene name: LI_gene_25455;
• Additional information: details;

Expression of Ll_transcript_88096

FPKM

• FPAB: 12
• FPNAB: 15.2
• LF1: 17.9
• LF2: 18.9
• LF3: 16.9
• LF4: 13.7
• UF1: 14.4
• UF2: 20.7
• UF3: 14.8
• UF4: 11.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_88096

• Blastp: Isoleucine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 74.68% of identity
• Blastx: Isoleucine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 74.68% of identity
• Eggnog: amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) (By similarity)(COG0060)
• Kegg: Link to kegg annotations (AT5G49030)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439298.1)
• Pfam: tRNA synthetases class I (I, L, M and V) (PF00133.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;