| Id Trinity | FTRINITY_DN52422_c2_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_87612 |
| Sequence | TTTTTTTTCAAAATTTTCCAATGTGGGACTTGAGAGTTTTTTGATTTCACTCCCGATGTTCCAACACAAACTAGTTAAAGTCAGTTCAAGTCATGTTTAT GCCTTGTCCGATCTGAGTTATACATTTGTTCTAATTAGCCACCACCCACTGTGCTCTCCGCTGCTCCTTTCAAGAGTTTCAGAGCATTACTGTTGCATAA GTCGTCGTATTTTAAAGTGAAATTATCGTCCAAGTGTTTTTCTAGGTGGATAAAAATGGAAGGTAATCTTAATTATACCATAGAGGACAACAAAAAGGAG TCTAGAGGTGCCTTGATTGTCCTAGAAGGCTTGGATCGTTCTGGGAAGTCTTCTCAGTGTAGCAGACTAGTGTCCTACCTGGAAGGGCATGGAATCTCTG CTGAACTATGGAGATTTCCCGACAGAACCACGGATGTTGGGAAAATGATATCTGCCTATCTTACTAATGCATCACAATTGGATGATCACACTATTCATCT TCTCTTCAGCGCCAATCGTTGGGAAAAGAGGTCGTTGATGGAAACTAAACTGACATCTGGAACAACCCTCATTGTTGACCGTTATTCTTATTCTGGTGTT GCTTTCTCAGCTGCCAAGGGACTTGATATCGAATGGTGTAAGGCACCAGAGATTGGGTTGCTTGCGGCAGATCTGGTAGCATACCTTGACATATCACCAG AGAAAGCTTCAGAAAGAGGAGGTTATGGAGGTGAGAGATATGAAAAGCTAGACTTTCAGAAGAAGGTTGCTGAAAGTTTCAAAGATCTTCATGATACAGC CTGGAAGGTTGTAGATGCTTGCCAACCCATAGAAGATGTGGAGAAGCAATTGCAAGACATAGTACTTCACTGTGTCACAGAATGTCAGAAGGGAAAACCC CTTTCCTTCTTGTGGTCTAAATAGACTTGTACTCTTGACAGGTATGTCTTGCATGCCAGATAAATTCTGAACACTAAAACCCATTTATATGTAATTCTGG TTGCTTCATTTCTGCATATCGTTATCTGGGCGGAAAATTATACTCGGCGTTGTCTTGTTTCACATATTACACCAATTTCTCAATATTATGTTGTCAGTCA TTTACTCCCTCAAAATCTATGTTGTCATTACATGTACTCACTCCTTCAGGTTTATGTTATCATTAAACTTACACCCTTTACAACATAAACTTTCATGAAA GTTGGTGTTATTTCTCAAACAAGAAAGGATAATTTTCCATAATTTGAAATTTGTTTGCTAAGTAATTTGAAGACCTTTGCTCCTAGACAATTTAGAATTT GTTCAAGTTGGAAGGAATCAAGAACTCCTTATTCAACCATTGTGTTTTTCATGCAGCAGTTTCTGTAACCATGATGAGATCTTCTATATGTCTAAATTTC ATAGAACTTGGCCTGCAAAAAAAGCCATACTGGTGCAAGGATTTAGATTATGTTACCATTGTTATCTACCACAAAATATTACCATTTTTTACAATTACTA TTTAATTTATTTATCTACATTGAATATTATGGATGTTTAGATTAGTGTTTTTTTTTGTGTGTGATGACATTTGGGTTAGTACTTAGTTTCTATTGAGCAC CAGTTACAACTTGATAACGATATTTACGTTATTACCCTTACCACAATAGTGGCAGAGATTATGATTCTAATTTTTTTGGTTGCATGGAGATTATGTTTAT AAAGAATAAAAAATATTCAAACATATTGGTTGAGTAGGAAAATGTTGTGGGAAAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_25463; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_87612
| Blastp | Thymidylate kinase from Arabidopsis with 73.66% of identity |
|---|---|
| Blastx | Thymidylate kinase from Arabidopsis with 63.04% of identity |
| Eggnog | Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (By similarity)(COG0125) |
| Kegg | Link to kegg annotations (AT5G59440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459500.1) |
| Pfam | Thymidylate kinase (PF02223.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |