| Id Trinity | FTRINITY_DN52426_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_87753 |
| Sequence | AACACATTGAAAATTTGAGCACAATCACATGATATCATATATCTAATCCAAACGAAGAAAACCTCTATCCCTATTCTTCTTCATCAATCACTCACAACAC AATGAATAGCTTAACAACGAGCTTCTCAATTCGAATATGTAACTCTCGTTCTGACCTAATCCCTATACGACACCGTTTCCTTCGTGAATTCATCAAAACA CGTGTCACTCTTTTACCAACCAAATCACTTAGACCACATCCAAAGATTGTGTGCATGGCGGAACCTTATATGATAACCAAGCTTGAATCAGCGGAGAAGA CCTGGAAAGAATTATCGGTGAAGTTGGCTGATCCCGATGTCGTGTCTAATCCCAGCGAGTATCAAAAGTTGGCACAATCTGTGTCTGAACTCGACGAGGT TGTGTCCACATACAAGAGTTTTAAAGAGTGCGAGAAGAACCTAGAAGAAACTAAAGCTTTAGCAAAGGATGATGGAAATGATGAGGATATGGCCCAAATG ATATCATATGAAATTGAATCTTTGTCAAGGCAACTGGAAGAGCTTGAGGGAAAGCTTAAGTTGTTACTGCTACCCAGTGATCCTCTGGATGCAAGAAACA TAATGCTTGAAGTACGAGCAGGTACTGGAGGTGACGAGGCTGGAATATGGGCTGGTGATCTTGTCCGAATGTATGAAAAATATAGTGAACGGAGTTCTTG GAAATTCTCTCCTGTCTCATGCTCTGAGGCAGAAAAAGGAGGATACAAAACTTATGTGATGGAGATAAAAGGAAAACGTGTCTATAGTAAATTAAAATAT GAATCTGGTGTCCACCGAGTTCAACGTGTTCCTCTAACAGAAACACAGGGTCGGGTACATACTTCTACTGCAACAGTTGCCATCATGCCAGAGGCTGATG AAGTTGAAGTTGAAATCGACCCAAAAGATATTGAGCTAACAACGGCACGTTCTGGGGGTGCAGGAGGCCAAAATGTTAATAAGGTGGAAACAGCCATTGA TCTATTCCATAAACCAACTGGAATCCGTATCTTTTGTACTGAAGAAAGAACTCAACTTCAGAACAGACATCGCGCTTTTCAGTTGCTCCGAGCAAAACTG TAAGCATAAACATTGAAATGTAGTTATTTTGTCAACTTCACCTGTTTGATTTTGTAATTTAGTTTTGTTCATGTCTACAGTGTTGTGAACTTATTCTTCT TTTCCTCTTGAGTACATGTTCACAAAAATCATCCCAATCCTCTCTTGAGTTCAATTATATGTGAAAGAATGTAATGTCATGAAGTTGAGACTGGCCAATG CTATAGGCACTTTAGTATAATTTATATAAGTGTTCGCTTAACCTATTTACTTTAGTATGTTGCATTCAAAATGATACAAGATCCTTTTACAGCTTAGAAA TTAAGGTAAGGGAGCAGCAAGAGTCAATACGAAACCAGAGGAAATTACAGGTATCTGCTCCTTGTTGATATTTGGAATACTGACATTTTCCCATCATGAT TTGCATTAATCATACTTTTGTTGGTGTACTTGCTATATGGGTGTGTCTATTAAAATTCTTCGCCGTACAGGTTGGTACAGGTGCACGGGCAGAGAAAATT CGGACATATAATTACAAGGTACTCATTATAGTAGTCTATGTAATATTCCATGCAGCCGGATACTCAACTATGTAGTTTAAGCAATATGACATAATAAATT ATCTTTACTTCTCTCATAATCACATTCATCGAGTGCAGTGAATGACAGTTTTATAAATTTTCACTGGGAACTTCTTTTTGCACCCATGGTTTTGTGTTTT ACACCCATCGAGTAAGCTATCAGAAAGGGTAAAAATTTCGGATAACTTATCCGGCAGTTAAAAAAAATCTTACAAATGGCTTATCCGAAAATATGGGTGT GAAACTCAAAACCACAAGTGCAAAAAAGTTCCCATTTTCCTTGTCTTGATGAGGTTATGGTTGTTTTCTGGCAGTTTATGATACAATTTTTCTTATCAGG ACAATAGGGTAACTGATCACAGATTGAAGATGAACTTTGAGCTCACCTCTTTTCTTAACGGTGACATAGAAAATGCTGTTCAGGTATATTATCTACCACT CCTCCTTTGGCACGAACTTGTTTTTCTCTCCTTTTGTCTCCCTGTGTCTGAATGTCGGCAATATATGCTTAGAAAAGTGCTATATATAATCAATATAGGT GCACCTGCACACTTGTAAATGTTGCTTATCTAGGTATTATTAGATGAAGGCGGCTTAGTATTATAGCTGAAATGATTTTGGTAAGCAAGGACCTGCTAGG AGAAAAAAAAATGAAGGTTTTAGAGAAACCCACAGTCATTGAAACTCTTGGGTTGGATTTGATAATGCCGGCATTGCTGGGCAGAGGCAACGAGAAGGAA AATAGTAAGGTGCTGAATGATGTTGAATGGTAATGGTTTTCTAACCAAGATTAATACAAAAAAGGGTGGTACAATACACGAGTCTCCATCTTAGTGGAGT CTGATGAGGGTAAATGTACGTAGTCTTACCTCCGCAATCGGAGAGGCTGTTTCCAGGTTTAACCAAGATTAATACAATTAAATAAAAAACATTTCTTAAA TTATATAAAAAAACGCCTCAAGAGTGAAGAATGGGTAACTCCATGAATGTGAAGGCATGACTTTTGAAAAAAGAACAAAGTGAAAACACAAATAGCAAAC CACAAGAAATCGTGTACTCTAGATGACTGAGTGCACTGATGCAGCTTAATAAAAAATGGTATACTGGCAGTAATCTGCATGAATGGGCGAAAATGGTTTT TCGATAACACGACTTTGTATCACTGAAAATTATTCTTCTTGCAGTCTTGTGTTACAATGGAGCAAAAGGAGCTTCTGGAAGAACTTGCCGAATCTGTAGG AGCTCCTGCCCGTTGATATAGTGCAGATTTTGGTCATGTTATTGGAAATTTTTTGATGGACTACTTTTGACAAATGTAATATCTGCTATTATGTTGTTGT TCTCATTAATGTGTCTCTTCATCTGAAGTTTGTAACATCTCTCTAGCTTATTGTTAATGTCTATATGTGGAGCACTTTTACATGTAACATTTCACTAGAC AGAACTTCATGTGTAAATTTCATAATGTAAAGTGATGCAATGAACATTTGCTTTTGATGGAACTAGAAGTTTGTTATAAACAAAGCTAGAGAAGGATAAT ATTTTATTGGGGAAATGTTAACTTGGGGTATTGTTTAAGAAGGCAAAATAAGTATTTTTTCATTTTTGCATTGGAATTCATGCATGTACCTTAAGTTAAA GATATTAGTTTACACCCATTTTAAGTTACACTGGTTATACTCAATCTCATCCGTTCATTTCCTTAGATCTAACGAACCAAATGGGTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_25479; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_87753
| Blastp | Peptide chain release factor APG3, chloroplastic from Arabidopsis with 83.16% of identity |
|---|---|
| Blastx | Peptide chain release factor APG3, chloroplastic from Arabidopsis with 82.8% of identity |
| Eggnog | Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (By similarity)(COG0216) |
| Kegg | Link to kegg annotations (AT3G62910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419205.1) |
| Pfam | PCRF domain (PF03462.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |