Ll_transcript_87754

• Id Trinity: FTRINITY_DN52426_c0_g1_i7
• Name Transcript: Ll_transcript_87754
• Sequence: AACACATTGAAAATTTGAGCACAATCACATGATATCATATATCTAATCCAAACGAAGAAAACCTCTATCCCTATTCTTCTTCATCAATCACTCACAACAC AATGAATAGCTTAACAACGAGCTTCTCAATTCGAATATGTAACTCTCGTTCTGACCTAATCCCTATACGACACCGTTTCCTTCGTGAATTCATCAAAACA CGTGTCACTCTTTTACCAACCAAATCACTTAGACCACATCCAAAGATTGTGTGCATGGCGGAACCTTATATGATAACCAAGCTTGAATCAGCGGAGAAGA CCTGGAAAGAATTATCGGTGAAGTTGGCTGATCCCGATGTCGTGTCTAATCCCAGCGAGTATCAAAAGTTGGCACAATCTGTGTCTGAACTCGACGAGGT TGTGTCCACATACAAGAGTTTTAAAGAGTGCGAGAAGAACCTAGAAGAAACTAAAGCTTTAGCAAAGGATGATGGAAATGATGAGGATATGGCCCAAATG ATATCATATGAAATTGAATCTTTGTCAAGGCAACTGGAAGAGCTTGAGGGAAAGCTTAAGTTGTTACTGCTACCCAGTGATCCTCTGGATGCAAGAAACA TAATGCTTGAAGTACGAGCAGGTACTGGAGGTGACGAGGCTGGAATATGGGCTGGTGATCTTGTAGGTACATGCTTCCATGAAAATAGGCCATGCCTATT TTCATCACTTAATACAGAGTTGAAATGGTCAAAGTGAATAATGTTGTGCCCATTGGCCTCAGATGAAAAATGTATAAAATACACAATATATAATGATTTT GTCATTGACTAGTTTCTGAATTGTTTGACTGTCTATATTTTATCTTTACCTTCTAGCCTCTTGATTGCTCTAATTTGAATGTTTTAGTGAATGAACAATT GTTGTGAAGTTCAATTCTAAGCCTACTCTGATGCTGTTTTAATGTCAAATCAGGTCCGAATGTATGAAAAATATAGTGAACGGAGTTCTTGGAAATTCTC TCCTGTCTCATGCTCTGAGGCAGAAAAAGGAGGATACAAAACTTATGTGATGGAGATAAAAGGAAAACGTGTCTATAGTAAATTAAAATATGAATCTGGT GTCCACCGAGTTCAACGTGTTCCTCTAACAGAAACACAGGGTCGGGTACATACTTCTACTGCAACAGTTGCCATCATGCCAGAGGCTGATGAAGTTGAAG TTGAAATCGACCCAAAAGATATTGAGCTAACAACGGCACGTTCTGGGGGTGCAGGAGGCCAAAATGTTAATAAGGTGGAAACAGCCATTGATCTATTCCA TAAACCAACTGGAATCCGTATCTTTTGTACTGAAGAAAGAACTCAACTTCAGAACAGACATCGCGCTTTTCAGTTGCTCCGAGCAAAACTCTTAGAAATT AAGGTAAGGGAGCAGCAAGAGTCAATACGAAACCAGAGGAAATTACAGGTTGGTACAGGTGCACGGGCAGAGAAAATTCGGACATATAATTACAAGGACA ATAGGGTAACTGATCACAGATTGAAGATGAACTTTGAGCTCACCTCTTTTCTTAACGGTGACATAGAAAATGCTGTTCAGTCTTGTGTTACAATGGAGCA AAAGGAGCTTCTGGAAGAACTTGCCGAATCTGTAGGAGCTCCTGCCCGTTGATATAGTGCAGATTTTGGTCATGTTATTGGAAATTTTTTGATGGACTAC TTTTGACAAATGTAATATCTGCTATTATGTTGTTGTTCTCATTAATGTGTCTCTTCATCTGAAGTTTGTAACATCTCTCTAGCTTATTGTTAATGTCTAT ATGTGGAGCACTTTTACATGTAACATTTCACTAGACAGAACTTCATGTGTAAATTTCATAATGTAAAGTGATGCAATGAACATTTGCTTTTGATGGAACT AGAAGTTTGTTATAAACAAAGCTAGAGAAGGATAATATTTTATTGGGGAAATGTTAACTTGGGGTATTGTTTAAGAAGGCAAAATAAGTATTTTTTCATT TTTGCATTGGAATTCATGCATGTACCTTAAGTTAAAGATATTAGTTTACACCCATTTTAAGTTACACTGGTTATACTCAATCTCATCCGTTCATTTCCTT AGATCTAACGAACCAAATGGGTG
• Tissue: flowers
• Gene name: LI_gene_25479;
• Additional information: details;

Expression of Ll_transcript_87754

FPKM

• FPAB: 0.4
• FPNAB: 0.3
• LF1: 0.3
• LF2: 0.4
• LF3: 0.3
• LF4: 0.2
• UF1: 0.2
• UF2: 0.4
• UF3: 0.1
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_87754

• Blastp: Peptide chain release factor APG3, chloroplastic from Arabidopsis with 84.85% of identity
• Blastx: Peptide chain release factor APG3, chloroplastic from Arabidopsis with 82.77% of identity
• Eggnog: Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (By similarity)(COG0216)
• Kegg: Link to kegg annotations (AT3G62910)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419205.1)
• Pfam: PCRF domain (PF03462.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;