Id Trinity | FTRINITY_DN52430_c0_g1_i6 |
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Name Transcript | Ll_transcript_88203 |
Sequence | CCTAACATCCCTCATGGGAACCAATCTACACCAACCAAAATCTGAATCAGAGAATGACATGGAAGAGAAAGAAAACACTTGTACATTTGAACCCTTTCCT CATACCCTTTATCCCAAACTCTTGTCTTCCTAACATCCCTCATGGGAACCATTTTTTCTCCTCACACTCTTTCTCCACTCTTCAACATCAAAGCTTCAAC CTCAAAAACCCTTGTCTCTCCCCAACCCAACTCAAATTCTAAAATTTACTCTAAACCCATTATTTCATGTCTCAAAAAGAACCAAACTTTATCTCTTAAA CCATCTTGGCCTGCATGTACAAGCTGGTTGACTCATGCACAACATGGCCTAGCAGCTTTGGCAATTTCCTTGGCTCTCAGCTTTAGCCCACTTTTGCACA CTGGCAATGCACTTGCATCTGAATTTGATGTACTTAATGAGGGTCCACCTAAAGAATCTTATGTGGTTGATGATGCAGGCGTGCTTAGTAGGCTGACAAA GTCTGATTTGAAGAGGTTATTGTCGGATTTGGAAACCAGGAAGAACTTCCACGTCAATTTTATTACAGTGAGAAAACTCACGAGCAAAGCTGATGCTTTT GAGTACGCGGACCAAGTTTTGGAGCGTTGGTATCCTTCCGTAGAAGAAGGCAATGACAAAGGTATTGTGGTGCTTGTCACAAGTCAGAAAGAAGGAGCTG TGAGTGGTGGCCCGGCTTTTGTCCAAGCAGTTGGAGAAAATATCCTTGATGCCGTTGTCTCAGAAAACCTTCCAGTATTGGCCACTGATGAGAAGTACAA TGAAGCTATTTACAGCACTGCGAAACGGCTAGTTGCCGCCATTGATGGCCTTCCGGATCCTGGTGGGCCCTCTTTTAAAGACAATAAGCGAGAGTCTAAC TACAAATCTAGGCAAGAGACGGAAGAGAAGCGTGGTCAATTCTCTCTTGTAGTTGGAGGTTTGTTGGTCATTGCTTTCGTTGTGCCTATGGCACAATACT ATGCTTATGTATCCAGAAAGTGAGAAAATAGTTGTATAATTAGATCTGTCTTGACTTCGAATTCAGATGTATTATATGCAGTTGTAACCATGCTCATGTC ACAATTGAGCTTGAGAATGTTGGAGAATAAGATCAGAGTTTTGGCTTGTAAATACAATGCCAAAGTATTGAACTGTTATATGGTAATTTTTTATGTAATC TTGCTGCATATATTTATGTAATTGTGAGAAGAAGGGTTGTGTTGGCACCCTCACAGAATGAAACTTTACAGATGGAAAAGGAAGAGATGTTAGTGTGTTA GACCAAATCTAGTGCTTAAATAGTTTCCAAATTAATATCCAAACTTCATCTACATGTAGTGGTTAAGAAGTCTAACTAGCCATGGTATTTAAGTTAAAAA CTTTAGACAAAGTCATTGAGCAAATCTTAATTCATATTTATTTGTAGAA BLAST |
Tissue | flowers |
Gene name | LI_gene_25528; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_88203
Blastp | UPF0603 protein At1g54780, chloroplastic from Arabidopsis with 70.65% of identity |
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Blastx | UPF0603 protein At1g54780, chloroplastic from Arabidopsis with 70.65% of identity |
Eggnog | of methanol dehydrogenase type(COG1512) |
Kegg | Link to kegg annotations (AT1G54780) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421308.1) |
Pfam | TPM domain (PF04536.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |