Id Trinity | FTRINITY_DN52440_c0_g1_i5 |
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Name Transcript | Ll_transcript_87037 |
Sequence | AATGAATGCAGTTTCCATTTGTGATTTCTCGAGTTTCAAACTGTTTTTTCAAAACTCGTTAGTTTTGTAATCCCTATTCTCATAATATTCCATGTGATTA CTTTATTTCAGGATTGCAGATGCTGAGGAAAACTTAGGGGAGAGTGAAATTCGAGAGGCTCACTTGGCAAAATCCTTGTTTTTTATCCGGATTGGTGACA AGGAGAAAGCCTTGGAACATATCAAGGTGACAGAAAGCAAGACAGTTGCAGTTGGCCAGAAGATGGACCTAGTTTTTTATACATTACTCCTTGGTTTCTT CGACATGGATTTTGATCTCATTGCCAAAAGCATTGAGAAAGCTAAAAGCTTGTTCGAACAAGGTGGCGATTGGGAGAGAAAGAATCGACTGAAAGTGTAC GAGGGACTATACTGCATGTCAACTAGAAATTTCAAGAAGGCTGCTGATCTGTTCTTGGATTCTATTTCTACCTTTACAACCTATGAGCTTTTCCCCTATG ATACATTTATATTTTACACGGTTTTGACAAGCATTATATCTTTGGATAGAGTTTCTTTGAAGCAAAAGGTTTTTTTATCGAGCATTTGTTTCTCTATTTT ATCATTTCCCTTTCTGTTTCTTTCAACGTGTTTTGCTTATTATGTTATTAATTTTAGTTGCCTGCATCAGGTAGTGGATGCTCCTGAGATCTTAACAGTT ATTGGCAAAGTCCCATATCTTTCAGAGTTTTTAAACTCTTTATATGATTGTCAATACAAGTCTTTTTTCACAGCATTTGCTGGCTTGACGGAGCAAATTA AGTTGGACCGCTATTTGCATCCGCATTTCCGGTATTACATGAGGGAGGTCCGGACTGTTGTTTATTCCCAGTTTTT BLAST |
Tissue | flowers |
Gene name | LI_gene_25579; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_87037
Blastp | 26S proteasome non-ATPase regulatory subunit 6 from Oryza sativa with 74.51% of identity |
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Blastx | 26S proteasome non-ATPase regulatory subunit 6 from Oryza sativa with 76.47% of identity |
Eggnog | Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 6(COG5187) |
Kegg | Link to kegg annotations (4336206) |
CantataDB | Link to cantataDB annotations (CNT0000653) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434025.1) |
Pfam | 26S proteasome subunit RPN7 (PF10602.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |