Ll_transcript_87040

• Id Trinity: FTRINITY_DN52440_c0_g1_i8
• Name Transcript: Ll_transcript_87040
• Sequence: AAATACAGAACACAAGGTAAGAATCAAATTAAGGAGAAACCGAGAAACTCATAAAAGTGGTGCTGAACAATTGTTTGTTCCGAAGTTTGATAAGCGATGG AAGGAGAAGAAGGATCTCAGCATCCACATCTAATTCTTGCTAGCAAGCTATTCCTTCTCACTCTCTCCGATATCCCTGACATTGAAAAGCTTCGATTCAA AGACGATGTTTTCACCTTTGTCAAACAAGACGATATGCTTCCTTTGTACGAAACCCTAATTGCTAGTTCCGTGTTGGATGCGGATCCTGCACTTGTGGAA TCGATGCGTGTTAAATTGGATGATCAACTCAAGAAGCTGGATGAAAAGATTGCAGATGCTGAGGAAAACTTAGGGGAGAGTGAAATTCGAGAGGCTCACT TGGCAAAATCCTTGTTTTTTATCCGGATTGGTGACAAGGAGAAAGCCTTGGAACATATCAAGGTGACAGAAAGCAAGACAGTTGCAGTTGGCCAGAAGAT GGACCTAGTTTTTTATACATTACTCCTTGGTTTCTTCGACATGGATTTTGATCTCATTGCCAAAAGCATTGAGAAAGCTAAAAGCTTGTTCGAACAAGGT GGCGATTGGGAGAGAAAGAATCGACTGAAAGTGTACGAGGGACTATACTGCATGTCAACTAGAAATTTCAAGAAGGCTGCTGATCTGTTCTTGGATTCTA TTTCTACCTTTACAACCTATGAGCTTTTCCCCTATGATACATTTATATTTTACACGGTTTTGACAAGCATTATATCTTTGGATAGAGTTTCTTTGAAGCA AAAGGTTTTTTTATCGAGCATTTGTTTCTCTATTTTATCATTTCCCTTTCTGTTTCTTTCAACGTGTTTTGCTTATTATGTTATTAATTTTAGTTGCCTG CATCAGGTAGTGGATGCTCCTGAGATCTTAACAGTTATTGGCAAAGTCCCATATCTTTCAGAGTTTTTAAACTCTTTATATGATTGTCAATACAAGTCTT TTTTCACAGCATTTGGTGAGCAGAGATAGTAATATTTTTATGTTATATATTGATTTTCTTTAACTCATCTGATGTAGAAAAGGGTATGAGGGAAATGCTG GCAAATAGCTAATCTCTATGTATTTGAATCCAGAATGATAGTCTTGTTTCATTAAATGTATTTCAGCTGGCTTGACGGAGCAAATTAAGTTGGACCGCTA TTTGCATCCGCATTTCCGGTATTACATGAGGGAGGTCCGGACTGTTGTTTATTCCCAGTTTTTGGAATCATATAAGAGTGTTACAATTGAGGCTATGGCA AAAGCCTTTGGAGTGACAGTGGATTTCATTGATGTGGAGTTATCACGTTTTATTGCAGCTGGAAAACTTCATTGCAAGATTGACAAAGTTGCAGGTGTTC TGGAAACTAACCGGCCTGACGCAAAGAATGCTCTTTACCAAGCAACTATTAAGCAAGGAGACTTCCTACTGAACCGGATCCAGAAACTATCACGGGTGAT TGATCTTTGAAGTTATCTCTATGATTCTAAATTTTACCTTTTTTCCATGGGAAAGGCATTTCTATAAAGGGAAATTTTGAAGGGTTTCCCATTGAATGCA TGGGTGGTTGTGACATTTCTGTAGTCTATTTGATCTCCAAATTAAGGAACACTCAAGGTTGCTGAATCCAACATGTCTCAATTCAGTTTTCCATTATTTT AGAACAGATTATATAGTTAGTTTTTTTGTTGACAATGTACTTGTTTTTAGATGCTAGCATGTAGGATATTCCATGATATTGTGTGACTACCAGTTTGTGT GTGATTTGAGATGAAAAAATCAAGTGATTTTAACTTTTTGTAGTTATGTTTATCATTTGTTAGCTTATAGTATAGCAAAAGTTTTGTTTTAATTAAATTT TAATCTTATTGTGGGATTTTGTTGCAATTAAAGTATAATGCATATATTGTTTGATGTTATTTTTAAAA
• Tissue: flowers
• Gene name: LI_gene_25579;
• Additional information: details;

Expression of Ll_transcript_87040

FPKM

• FPAB: 1.1
• FPNAB: 0.8
• LF1: 1.9
• LF2: 1.8
• LF3: 1.4
• LF4: 0.3
• UF1: 0.5
• UF2: 2.3
• UF3: 0.6
• UF4: 0.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_87040

• Blastp: 26S proteasome non-ATPase regulatory subunit 6 homolog from Arabidopsis with 70.16% of identity
• Blastx: 26S proteasome non-ATPase regulatory subunit 6 homolog from Arabidopsis with 70.16% of identity
• Eggnog: Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 6(COG5187)
• Kegg: Link to kegg annotations (AT4G24820)
• CantataDB: Link to cantataDB annotations (CNT0000653)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434025.1)
• Pfam: 26S proteasome subunit RPN7 (PF10602.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;