| Id Trinity | FTRINITY_DN52442_c5_g6_i2 |
|---|---|
| Name Transcript | Ll_transcript_87671 |
| Sequence | AGATTGTATAAGTTTTTTATATAGAAATTAACAAATGTGAGAATAAAAATAAGAAAACACAAATTACATTCCCTTGTAATATACTTTACATTGGTAGAGT ATAAGAAGGAACCAACACAAATTAAATGTTTAATGTCTCGGATTCGTTCGATCCCTGTGAATGAATGAAAAAATATCTACTAGAAGAGTTAGACTCACAT ACTTATAGATATTACGAGGATACTCTATAAGAAGGAAACCTTCCTTTGCCTACTATCAGGGAGAGAAAAAACCTTGGCCGCCACCAAAAAACAGTGAGAA AACAAAAACAATGGCATTCTCTGCAACATCAACAACTCCTTCTCTTAACTTCACCACTTTCACTTCTTTCCCACACAACAATTTCTCTTCCTTTTCTCAC TCTCTTTCATTCCCCACTTCACCCTTTTCAAACCATAACCTATCTTTCTCTTCCCATTTTACCCTCCCACCTACCCCACGCGCCCACGCGCCCTCCACCT CCACCGCACCTTCCTCCTCCACCTCCTCCTTCCACGGCCTCTGCTACGTCGTCGGCGACAACATCGACACCGATCAAATCATCCCCGCCGAATACCTAAC CCTAGTTCCTTCAAAACCCGACGAGTACGAGAAACTCGGTTCCTTCGCCCTGATCGGGCTTCCGGCGAGTTACACCGCCCGGTTCGTGGAGCCAGGCGAG AGCAAAACGAAATACTCCGTGATCATCGCCGGAGCAAATTTCGGCTGCGGGTCCTCACGCGAGCACGCGCCGGTGGCGCTTGGCGCGTCGGGATCGGCTG CGGTGGTGGCGGAGTCGTATGCGAGGATATTTTTTCGGAACTCGGTGGCGACGGGGGAAGTGTATCCGATTGAATCGGAGGCGAGGTTGTGTGAGGAATG TAGGACTGGGGATGTGGTTACAATTGAGCTTGAGGAGAGTAGGTTGATTAATCATACCTCCGGGAAGGAGTATCGGTTGAAGCCGATCGGGGACGCCGGG CCGGTCATTGAGGCTGGTGGGATATTTGCTTATGCTAGGAAGACTGGAATGATTCCAACTCGTTGAGGGACATCATGTTAGAATGTTGCAGTAGATTTTT GGAAGGCTAACTAGAATTTTTCTCTGTATTCTTCATGGAAGCTGGAATTTGTTGGAACTGCATCACCTTCTTTGGCAGCAACTAGCAATTACACAACTAT TTGAGTACATGCAATTTTAGTGCCTATTCAAACCAGATTTTCTTTCTTATCATGCAGGTTTTTATATACTGAATTCCTCAATAGATTCATACTGCATTGT CTTCATAAGTTATTCAGTTGAGTGTTAAAATCAATAATGTAATTTGGTGTTGGAACATTTAAGACTTCCATTATAACATTTTGTACTTTGTGGTACATGT TGGATGTTGCATCAGAAGAATATTTTTTCTCTTTAACCCTCACTTCTTCTTTCATCTGTTCTAAGAGATAAATCTTCCTTTCACACACTTTCAAATCCAG AACCTCATCTTATTTTCACCCATAATTTTTGAATTCTCATCCAAAAATAATTTTTATCTTCCTATTCTCTGAACTGCACTCATTTGGGTAAAACTTCACA CTTTTGTGCCAAGTTATGTTAATCTTATGGTATGAAGTGAACATTATTAAGTTTAATTACAGCAATGAATTAGGCTTTTGTGAACGGGGTGTTAGTTTAG TGATGTAAGGTCCTACTGAATCCTGTATATTGGGTTAAATATTCGATTTTTGTGAACTACACTTGTTAGATGATGTAGCCATATATCTTGAAAGTGATTA ATTCTTTATCAATATCGTTAATTATATAAAAAATTGAAATAGGGTCTTGATGTATTACATATTGCTTTGAGAAAGAGTTTGATATATTGTTATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_25596; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_87671
| Blastp | 3-isopropylmalate dehydratase small subunit 3 from Arabidopsis with 64.84% of identity |
|---|---|
| Blastx | 3-isopropylmalate dehydratase small subunit 3 from Arabidopsis with 81.01% of identity |
| Eggnog | Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (By similarity)(COG0066) |
| Kegg | Link to kegg annotations (AT2G43090) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443388.1) |
| Pfam | Aconitase C-terminal domain (PF00694.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |