| Id Trinity | FTRINITY_DN52449_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_86945 |
| Sequence | CACCAAAGCTGACTCGGGTCCTTTGTCTCTCTCCCTCTGCACCTCGAGCCCAAAAATTGTACTCCATTTTCATTTACTCTCACTACAAAACTACCACTAA GAACCTTCTAGAACAAAAATGCACATTTTCCTAACAAACTTCTCTTAACACTACATGCATCATTTCACTGCTTGATACATTTTCAGTTGTTAATTTTGGT TTTAACTTGTTGAAAAAGAAGATGGTGAAAAAGAACAAAAGAAAGAAGGAGGAGATTGCTGAGGATTGGTGCTTTTTATGCAAAGATGGAGGATCAATGA GGGTTTGTGATTTCAAGGATTGCCTTAAAGTTTATCATCCAGTTTGCGCCGGAGAAGAAGATTCGTTTTTGGAGGCTGACACTTATTGGTGTTGCGCTTC ACATTATTGCTTCCGTTGCCGTAGAAGCTCAAAGTTTAAGTGCATTTGCTGCCCAATAGCGGTTTGTGGGCGCTGCTTAGGTTATGGTGAATTTGCTATT GTCAAAAGGGACAAAGGATTTTGCAGCCACTGCTCAAAACTTGCACTACTAATTGAAGAAAATGTTGATGTTGATTCTGATGGGGGAAAGGTAGATTTCA AAGATTCAAATACATATGAATCCTATTTTTTAGAATATTACGAAGCTATGAAAATAAAAGAAGGGCTGAACTCTTCACATGTGCATTCCGCGCATAACTT CTTGAAGAATGGTAAAAACCAGAGTAACTTGGATCTAGCTGGAATAGGTGAAGGGGAAGATGATGGTGGAGATTCTGAAGACGGGAGTGACTATATAGTT TCTGATTATGATGACATGAATGATACAGCAGGAGTTAAACCAATGAAGAAAAAGCAGAGATGCAAAAAGCAACTAAAATCAACAAAAGGAAATATGAAAG ATAAGAAAAAGGAGTTTATTGGATGGGGTTCAAGAAGTCTCATAGAATTTCTTAATTATATTGGTAGAGATACGAGTAAAGAATGTTCTGAACATGATGT TGCTTCGGTCATTATTGAGTACTGCAAAGTAAACAACCTCTTTGACTCCAAGAAAAAGAGGAAGGTGCTTTGTGATGTAAAACTGAGTTCTTTACTCGGG AGGAAATCAGTGAATAGAAACAACATACAAAACCTTTTGGCACATCATTTTGCTGAGAATGTGGAGGAATTTGATGATATCACTAGTAGTTCAGAAAATA GGGATGATAATGGGCCATTCAAATGTTCGAGCAAGGGGAAATTGTCAAGTACAAAATCTATTCAGAACCTAGTTCCTGAAGAGCGTAAAAGCAGTTTTGC AGCCATAGTTAGTTCAAATATCAAGCTTGTATACTTAAAGAGGAGTTTAGTGGAGGGGCTTTTGAAACAGCCAGAAACTTTTAGTGACAAAGTAATGGGA AGTTTTGTAAGAGTCAAGTCTGACCCGAATGATTATTTACAGAAGAATTCCTATCTGCTTGTGCAGGTTGTAGGTAATTTTATGTAATATTCTTTGGTGG CATGTGTAATATCCAAAGCACATATATGTATAAGAAAAGTGAATTTTGAAATGTAATGCTTTGAGCAATGTTTGTTCTTTGGTGGCACATTACTGCAGGC ATTAAATTAAATTTAGATAAATATGATTGTTGTTCTTTCACTGGCTACCATACTTTTCCAATATGTAAACATTGAAATTTCTGTCCCTGCACCAATCACA GGAATAAACAGGTCGTCAAAGAATAACGAAATCAACGGGGAAGTTCTGCTTCAGCTTTGCTACATGCCAAAAGATGTACCTATCTGCAAAATTTCAGATG ATGACTTTACTGAGGAAGAATGTCAAGATCTCTATCAGAGAATGAAAAATGGACTGCTCAAGCAGCCTACCGTACTGGAGCTTGAACAGAAAGCGAGAAG TCTGCATGAAGATATAATAAAGCATTGGATCCCGAGGGAGCTGACACTGTTACAAAATCGCATTGATATGGCCAATGAAAAGGGGTGGAGGAGAGAATAT CCTTACATGATTTGGATTTTAGATTGTTACTTAAGATTAGTAGATAAAGATCAATCAGTTCTGAATCGTTACCCAATTTAATGCAGATCAGGCATGGTTA GCTGTTAATAACTTCCCAATAGGAGAGGGGTCATAGAATATCATCTAAAAGCTCATATTATTGTTTTAATATTTTACATATTTTTTGTATTTCTCTCAGT TGATTTTTTTAGTATCTAATGAATATTCATTGTTAGCCTTAACCATATTTTCATACACTTGCTGAGTACATAGAGCGAAAACTGAAGCTTCAGACTGCAT CAGAACAGTCACGTTTATTAAGTGATATTCCAAAAGTAATTCCTGAAATAGTTGATAGCAAACTATCACCGAAGAATTCCCCGAGAAATGATAGGCTTGA GGGAAATGGGTTGCCAGAATTAGCCATGGGAAAGACTTCCAACTCTGTCGGACGTTATCCCAAGCATAATGCTTTTGCTCGTTGGCCTCATAATACAACA GATGTTGCAGGTTTGCCTCATTCTCCTGATTGTTTTCTATCTCTGTTGTGTCCTTGTAACTTCTGCTTTTATTTCTTTTGTAAATATGTTTCTATATATA GGGTTCTTGATGTTGCTAATGTCTTGTGCATTATAATCACATTCTTATTCATACTTTGTCATTTCATGTCCTCTACAAATTGGAGTAGCTCTCTGTTCTA ATCAGTGAATGCCATGTTTTACTCAGACTGAATCAAATTTGTCTTCTGTGATATTTCTATTTGTTTCGTATGATATTTCATCCACTATGTCCTCTTCATG GTTGTGACCTGCTTTTATATGTACATGCCTCTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_25622; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_86945
| Blastp | Zinc finger CCCH domain-containing protein 19 from Arabidopsis with 29.21% of identity |
|---|---|
| Blastx | Uncharacterized protein At5g08430 from Arabidopsis with 45.13% of identity |
| Eggnog | DNA binding nucleic acid binding protein binding zinc ion binding(ENOG4111KSI) |
| Kegg | Link to kegg annotations (AT2G16485) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419914.1) |
| Pfam | SWIB/MDM2 domain (PF02201.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |